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SR-VP_0-2_scaffold_141_6063796_prodigal-single.1__X__X__00107
Bact-VirSR-VP_0-2_scaffold_141_6063796_prodigal-single.1__X__X__00107
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 44-105
D2
high
residues 125-207
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5a67A00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.73 | 65.0 | 4.83e-01 | 97.6% | 88.3% |
| 1t6aA02 | 3.30.310.120 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein | 0.66 | 45.0 | 4.63e-01 | 73.5% | 74.4% |
| 3rf9B02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 48.0 | 3.28e-01 | 77.1% | 39.2% |
| 1yemB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.65 | 56.0 | 4.49e-01 | 97.6% | 89.2% |
| 2v8qA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.64 | 52.0 | 5.15e-01 | 89.2% | 97.8% |
| 1mdcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.63 | 45.0 | 3.88e-01 | 74.7% | 84.7% |
| 3doaA01 | 2.30.310.10 | Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain | 0.63 | 45.0 | 3.64e-01 | 73.5% | 43.8% |
| 1o8vA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.62 | 44.0 | 3.78e-01 | 74.7% | 83.5% |
| 2jkgA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.62 | 46.0 | 3.74e-01 | 80.7% | 80.0% |
| 1ospO02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.62 | 45.0 | 3.74e-01 | 77.1% | 68.5% |
| 3ijtB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 53.0 | 4.48e-01 | 97.6% | 89.5% |
| 2hzmG01 | 3.30.310.180 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.61 | 54.0 | 4.88e-01 | 100.0% | 73.9% |
| 3w9kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 53.0 | 4.52e-01 | 96.4% | 83.7% |
| 2bbuA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.60 | 41.0 | 3.36e-01 | 71.1% | 72.4% |
| 1t6lA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.58 | 40.0 | 2.90e-01 | 72.3% | 93.6% |
| 3c6kA01 | 3.30.160.110 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain | 0.58 | 47.0 | 4.57e-01 | 96.4% | 79.8% |
| 1vr8A00 | 3.40.1000.20 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like | 0.56 | 45.0 | 3.92e-01 | 89.2% | 94.1% |
| 2zfdB00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.56 | 48.0 | 4.31e-01 | 96.4% | 73.3% |
| 2j7qA00 | 3.90.70.120 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.55 | 42.0 | 3.00e-01 | 79.5% | 74.5% |
| 8es5A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 48.0 | 4.14e-01 | 100.0% | 99.3% |
| 1xkiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 49.0 | 4.28e-01 | 100.0% | 84.4% |
| 1mhmA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.55 | 48.0 | 3.47e-01 | 100.0% | 71.5% |
| 3q6aB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 47.0 | 4.08e-01 | 98.8% | 98.5% |
| 3cm1A00 | 2.30.31.20 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB | 0.54 | 40.0 | 3.39e-01 | 78.3% | 69.9% |
| 1xn5A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 47.0 | 4.01e-01 | 100.0% | 92.8% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.53 | 39.0 | 3.48e-01 | 78.3% | 86.7% |
| 3oe3C00 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.53 | 41.0 | 4.02e-01 | 81.9% | 81.8% |
| 2nugB02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 38.0 | 4.00e-01 | 75.9% | 100.0% |
| 4bf3A00 | 2.30.31.50 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Borrelia outer surface protein E/F | 0.52 | 39.0 | 3.40e-01 | 80.7% | 88.0% |
| 3o6qA02 | 3.30.70.2720 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 38.0 | 3.49e-01 | 80.7% | 57.0% |
| 2z0fA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.52 | 45.0 | 4.29e-01 | 100.0% | 98.0% |
| 2m47A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 44.0 | 3.59e-01 | 96.4% | 87.1% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.52 | 39.0 | 3.45e-01 | 79.5% | 89.2% |
| 3fehA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 38.0 | 3.35e-01 | 79.5% | 64.5% |
| 1xkpB00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.51 | 42.0 | 3.74e-01 | 97.6% | 62.8% |
| 1h10A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 38.0 | 3.41e-01 | 79.5% | 69.2% |
| 5tvfD00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.51 | 43.0 | 3.11e-01 | 97.6% | 71.9% |
| 1e2tA03 | 2.40.128.150 | Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases | 0.51 | 38.0 | 3.39e-01 | 79.5% | 73.5% |
| 3v8uA03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 37.0 | 3.65e-01 | 79.5% | 87.8% |
| 2vifA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.50 | 34.0 | 3.08e-01 | 72.3% | 66.7% |
| 2giaB00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.50 | 38.0 | 3.19e-01 | 81.9% | 82.2% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4966080 | 300.1.1.18 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle | 0.69 | 52.0 | 4.18e-01 | 78.3% | 82.6% |
| 3578398 | 4099.1.1.29 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF29306 | 0.64 | 46.0 | 3.60e-01 | 74.7% | 72.9% |
| 3793430 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.64 | 47.0 | 4.55e-01 | 78.3% | 78.9% |
| 4668044 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.64 | 45.0 | 3.85e-01 | 73.5% | 83.5% |
| 4962132 | 300.1.1.18 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle | 0.64 | 47.0 | 3.85e-01 | 79.5% | 80.6% |
| 3999576 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.63 | 46.0 | 3.82e-01 | 77.1% | 81.4% |
| 3870867 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.63 | 56.0 | 4.96e-01 | 100.0% | 93.3% |
| 4228206 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.62 | 44.0 | 4.55e-01 | 75.9% | 98.8% |
| 5004871 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.62 | 53.0 | 5.25e-01 | 96.4% | 94.4% |
| 3632777 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.62 | 55.0 | 4.10e-01 | 100.0% | 57.1% |
| 5016545 | 3435.1.1.0 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC | 0.61 | 54.0 | 4.41e-01 | 100.0% | 75.9% |
| 5007357 | 3435.1.1.10 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › PF27341 | 0.59 | 51.0 | 3.80e-01 | 97.6% | 36.4% |
| 3784224 | 220.1.1.70 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_5 | 0.59 | 41.0 | 3.54e-01 | 77.1% | 45.4% |
| 3266554 | 331.1.1.5 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N | 0.59 | 48.0 | 4.96e-01 | 90.4% | 100.0% |
| 3823427 | 331.4.1.2 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF | 0.58 | 50.0 | 4.40e-01 | 96.4% | 66.4% |
| 4027522 | 331.9.1.5 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP4E_app_platf | 0.58 | 52.0 | 4.94e-01 | 100.0% | 85.7% |
| 4976589 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.58 | 50.0 | 4.85e-01 | 97.6% | 86.3% |
| 3242737 | 5.1.5.47 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › BCAS3_WD40 | 0.58 | 48.0 | 2.91e-01 | 90.4% | 94.8% |
| 5075100 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.57 | 49.0 | 4.63e-01 | 96.4% | 91.0% |
| 3937758 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.57 | 39.0 | 3.57e-01 | 72.3% | 60.2% |
| 3259661 | 331.23.1.9 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › RnlA_toxin | 0.55 | 37.0 | 3.97e-01 | 73.5% | 82.9% |
| 4957009 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.55 | 46.0 | 4.15e-01 | 96.4% | 74.2% |
| 4956970 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.55 | 46.0 | 4.19e-01 | 96.4% | 80.9% |
| 3284788 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.54 | 45.0 | 4.64e-01 | 95.2% | 100.0% |
| 3353407 | 331.10.1.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox | 0.54 | 47.0 | 3.20e-01 | 100.0% | 58.2% |
| 3955906 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.54 | 47.0 | 4.73e-01 | 100.0% | 98.8% |
| 4768813 | 331.10.1.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox | 0.54 | 46.0 | 3.53e-01 | 100.0% | 85.3% |
| 4992391 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.54 | 39.0 | 2.71e-01 | 75.9% | 54.4% |
| 3260117 | 331.10.1.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox | 0.53 | 46.0 | 3.14e-01 | 100.0% | 56.1% |
| 3280360 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.53 | 45.0 | 4.04e-01 | 96.4% | 75.0% |
| 3305495 | 331.10.1.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox | 0.53 | 45.0 | 3.10e-01 | 100.0% | 60.6% |
| 3495285 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.53 | 46.0 | 3.85e-01 | 100.0% | 62.7% |
| 3960286 | 331.1.1.3 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › AlkA_N | 0.53 | 47.0 | 4.70e-01 | 100.0% | 97.6% |
| 3170100 | 884.1.1.1 ↗ | a+b two layers › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › CobW_C | 0.53 | 46.0 | 4.15e-01 | 97.6% | 100.0% |
| 3943688 | 2.7.1.1 ↗ | beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V | 0.52 | 33.0 | 2.61e-01 | 74.7% | 28.9% |
| 3653236 | 3347.1.1.0 ↗ | beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 | 0.52 | 41.0 | 3.31e-01 | 84.3% | 89.2% |
| 4992891 | 331.16.1.1 ↗ | a+b two layers › TBP-like › TA0095-like › TA0095-like › DUF5611 | 0.52 | 43.0 | 4.08e-01 | 94.0% | 83.0% |
| 3822070 | 331.10.2.8 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › SAM_decarbox | 0.51 | 45.0 | 4.05e-01 | 98.8% | 84.3% |
| 4295675 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.51 | 44.0 | 3.92e-01 | 96.4% | 73.3% |
| 3974178 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.51 | 44.0 | 3.75e-01 | 98.8% | 61.4% |
| 4391638 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.51 | 43.0 | 3.87e-01 | 96.4% | 71.2% |
| 3801304 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.51 | 38.0 | 3.20e-01 | 78.3% | 70.7% |
| 4080135 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.51 | 43.0 | 3.79e-01 | 96.4% | 67.7% |
| 5061484 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.51 | 43.0 | 3.93e-01 | 96.4% | 78.1% |
| 3783819 | 331.10.1.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox | 0.51 | 43.0 | 2.90e-01 | 100.0% | 63.0% |
| 5051699 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.50 | 42.0 | 3.91e-01 | 96.4% | 78.2% |
| 3824156 | 708.1.1.7 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › DBD_Tnp_Mut | 0.50 | 38.0 | 3.98e-01 | 86.7% | 93.3% |
| 4471221 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.50 | 43.0 | 3.87e-01 | 97.6% | 74.2% |
D3
high
residues 212-362
Domain cluster:
rep: NC_021330__YP_008059651.1__M202-gp129__00089__D21-171
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00004.36 best | AAA | 46.1 | 9.70e-12 | 70.2% | 97.0% |
| PF00910.29 | RNA_helicase | 24.3 | 5.10e-05 | 58.3% | 65.7% |
CATH (79)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1r6bX04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.84 | 70.0 | 6.33e-01 | 86.8% | 88.8% |
| 7w42B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.82 | 77.0 | 7.31e-01 | 100.0% | 100.0% |
| 1g41A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.81 | 68.0 | 6.21e-01 | 87.4% | 92.7% |
| 7swlB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.81 | 68.0 | 6.54e-01 | 88.1% | 100.0% |
| 2qbyA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.80 | 66.0 | 6.27e-01 | 86.1% | 98.3% |
| 5kwaA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.80 | 74.0 | 7.09e-01 | 98.0% | 100.0% |
| 1um8A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.80 | 66.0 | 5.64e-01 | 86.8% | 92.2% |
| 1in4A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.79 | 68.0 | 6.86e-01 | 89.4% | 97.3% |
| 3u61C01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.79 | 66.0 | 6.48e-01 | 88.1% | 87.7% |
| 3vkhB09 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.78 | 67.0 | 6.21e-01 | 88.7% | 94.5% |
| 1svmA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.77 | 63.0 | 6.33e-01 | 85.4% | 98.0% |
| 7jgsD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.77 | 65.0 | 5.95e-01 | 88.7% | 96.3% |
| 3m6aA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.77 | 64.0 | 6.44e-01 | 86.8% | 93.3% |
| 5e7pA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.77 | 73.0 | 6.90e-01 | 100.0% | 100.0% |
| 3vkgA05 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.77 | 62.0 | 6.25e-01 | 84.1% | 98.7% |
| 7tjhE01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.76 | 61.0 | 5.78e-01 | 84.1% | 100.0% |
| 3vkgA17 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.76 | 60.0 | 6.57e-01 | 83.4% | 100.0% |
| 3pvsB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.76 | 64.0 | 6.48e-01 | 89.4% | 95.4% |
| 3bosB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.75 | 66.0 | 6.45e-01 | 93.4% | 96.9% |
| 4hutA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.74 | 56.0 | 5.09e-01 | 76.8% | 80.6% |
| 4rh7A01 | 1.20.920.20 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.74 | 63.0 | 4.56e-01 | 89.4% | 47.7% |
| 3vkgA10 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 60.0 | 5.49e-01 | 88.7% | 92.9% |
| 2fnaA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.71 | 59.0 | 5.36e-01 | 88.1% | 95.6% |
| 1l8qA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.71 | 66.0 | 6.40e-01 | 99.3% | 98.2% |
| 1jbkA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 64.0 | 5.94e-01 | 98.7% | 91.0% |
| 1z6tA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 62.0 | 5.89e-01 | 100.0% | 94.9% |
| 2iw3A03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 54.0 | 4.79e-01 | 86.8% | 80.4% |
| 3qhqB01 | 3.40.50.11940 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.66 | 53.0 | 5.41e-01 | 85.4% | 93.3% |
| 3gy1B02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.65 | 45.0 | 3.89e-01 | 70.9% | 95.4% |
| 6tqfA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 53.0 | 4.67e-01 | 86.1% | 88.8% |
| 7zdgC02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 53.0 | 4.55e-01 | 86.1% | 87.5% |
| 3kwsA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.64 | 45.0 | 3.76e-01 | 71.5% | 95.8% |
| 1o5zA02 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.63 | 41.0 | 4.28e-01 | 97.4% | 70.8% |
| 1o1zA00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.63 | 44.0 | 3.85e-01 | 71.5% | 95.6% |
| 3lzdA01 | 3.40.50.11840 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Diphthamide synthesis DPH1/DPH2 domain 1 | 0.62 | 37.0 | 4.52e-01 | 83.4% | 93.7% |
| 2eyqA04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 48.0 | 4.07e-01 | 84.1% | 49.8% |
| 1wp9A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 47.0 | 4.82e-01 | 84.8% | 87.2% |
| 4nl4H03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 47.0 | 4.37e-01 | 84.8% | 66.3% |
| 3qz6A00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.59 | 47.0 | 3.98e-01 | 85.4% | 90.0% |
| 3nwjA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 47.0 | 4.37e-01 | 85.4% | 82.0% |
| 8bj4A01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.59 | 47.0 | 4.14e-01 | 84.1% | 75.8% |
| 1usgA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 45.0 | 4.68e-01 | 85.4% | 86.1% |
| 6pd1C02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.58 | 45.0 | 3.87e-01 | 84.8% | 50.2% |
| 1mdbA01 | 3.40.50.980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 48.0 | 4.76e-01 | 87.4% | 90.5% |
| 5l3qA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 45.0 | 4.06e-01 | 81.5% | 61.7% |
| 4pioA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 46.0 | 4.41e-01 | 85.4% | 85.1% |
| 3islA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.58 | 45.0 | 3.82e-01 | 84.8% | 50.4% |
| 4d4iA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.57 | 52.0 | 3.82e-01 | 100.0% | 67.7% |
| 1j04A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.57 | 45.0 | 3.81e-01 | 84.8% | 49.8% |
| 4w7sA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 45.0 | 4.23e-01 | 84.1% | 67.7% |
| 1reqA02 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.57 | 47.0 | 4.66e-01 | 90.7% | 89.6% |
| 3r44A01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.57 | 51.0 | 3.81e-01 | 100.0% | 70.0% |
| 3i3wA01 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.56 | 38.0 | 3.87e-01 | 84.1% | 69.5% |
| 3e61A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 43.0 | 4.46e-01 | 85.4% | 88.5% |
| 2h6eA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 44.0 | 4.56e-01 | 85.4% | 100.0% |
| 4ms4A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 44.0 | 4.12e-01 | 84.8% | 71.7% |
| 5q22A02 | 3.40.50.12650 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 44.0 | 4.53e-01 | 85.4% | 94.6% |
| 1tjyA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 44.0 | 4.42e-01 | 86.1% | 88.2% |
| 4wv3B01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.55 | 49.0 | 3.65e-01 | 100.0% | 70.1% |
| 3dg3A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.55 | 46.0 | 3.86e-01 | 89.4% | 70.6% |
| 5b55A01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 40.0 | 3.71e-01 | 93.4% | 60.0% |
| 4ms4B02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 43.0 | 4.11e-01 | 84.8% | 72.2% |
| 6g80B01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 45.0 | 3.92e-01 | 87.4% | 87.8% |
| 3huuC02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 41.0 | 4.29e-01 | 84.8% | 91.0% |
| 3mw8A01 | 3.40.50.10090 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 36.0 | 3.97e-01 | 100.0% | 87.2% |
| 3k4hA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 42.0 | 4.37e-01 | 85.4% | 91.5% |
| 3eozB01 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.53 | 43.0 | 4.22e-01 | 85.4% | 90.9% |
| 1m0wA04 | 3.40.50.1760 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glutathione synthase, substrate-binding domain superfamily, eukaryotic | 0.52 | 41.0 | 4.37e-01 | 83.4% | 100.0% |
| 2k4mA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 43.0 | 4.32e-01 | 89.4% | 88.9% |
| 3flkA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.52 | 40.0 | 3.08e-01 | 80.8% | 71.0% |
| 5b1hA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 35.0 | 4.04e-01 | 84.1% | 100.0% |
| 3a11B02 | 3.40.50.10470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 | 0.52 | 41.0 | 3.80e-01 | 85.4% | 90.4% |
| 7sglD01 | 3.40.50.12650 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 41.0 | 4.32e-01 | 85.4% | 100.0% |
| 3hbaA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.51 | 40.0 | 3.74e-01 | 83.4% | 71.2% |
| 3ecsD02 | 3.40.50.10470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 | 0.51 | 39.0 | 3.61e-01 | 85.4% | 62.8% |
| 2atcA02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.51 | 41.0 | 4.10e-01 | 85.4% | 84.3% |
| 3loqA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.50 | 37.0 | 3.97e-01 | 76.2% | 95.3% |
| 2qgqA01 | 3.80.30.20 | Alpha Beta › Alpha-Beta Horseshoe › pyruvate-formate lyase- activating enzyme › tm_1862 like domain | 0.50 | 46.0 | 4.12e-01 | 100.0% | 80.2% |
| 1q15D02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.50 | 40.0 | 3.38e-01 | 86.1% | 66.4% |
ECOD (86)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4989618 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.85 | 76.0 | 6.74e-01 | 93.4% | 84.9% |
| 3663724 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.85 | 72.0 | 6.81e-01 | 88.1% | 90.3% |
| 4405880 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.84 | 72.0 | 6.63e-01 | 89.4% | 95.1% |
| 4022909 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.84 | 79.0 | 5.92e-01 | 100.0% | 52.4% |
| 3320528 | 2004.1.1.425 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, DUF815 | 0.84 | 79.0 | 7.24e-01 | 100.0% | 96.8% |
| 3237199 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.83 | 70.0 | 6.95e-01 | 87.4% | 98.1% |
| 3071116 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.83 | 71.0 | 6.45e-01 | 89.4% | 90.3% |
| None | — | 0.83 | 71.0 | 6.95e-01 | 88.7% | 98.8% | |
| 3263243 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.83 | 69.0 | 6.20e-01 | 86.8% | 85.5% |
| None | — | 0.83 | 78.0 | 6.00e-01 | 100.0% | 58.4% | |
| 3452618 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.83 | 78.0 | 6.39e-01 | 100.0% | 68.1% |
| 4134156 | 2004.1.1.125 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RuvB_N | 0.83 | 71.0 | 6.94e-01 | 88.7% | 98.8% |
| None | — | 0.83 | 78.0 | 6.33e-01 | 100.0% | 69.8% | |
| 3212870 | 2004.1.1.154 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2,AAA_5 | 0.82 | 69.0 | 5.30e-01 | 87.4% | 95.2% |
| 3468668 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.82 | 78.0 | 6.74e-01 | 100.0% | 99.1% |
| None | — | 0.82 | 70.0 | 6.90e-01 | 88.7% | 99.4% | |
| None | — | 0.82 | 70.0 | 6.67e-01 | 88.1% | 94.1% | |
| None | — | 0.82 | 78.0 | 6.05e-01 | 100.0% | 62.0% | |
| 3806608 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.82 | 78.0 | 6.30e-01 | 100.0% | 74.7% |
| 3813983 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.82 | 77.0 | 6.03e-01 | 100.0% | 63.0% |
| 3272527 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.82 | 78.0 | 6.21e-01 | 100.0% | 65.8% |
| 3618060 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.82 | 69.0 | 6.75e-01 | 88.7% | 96.4% |
| None | — | 0.82 | 70.0 | 6.68e-01 | 88.7% | 94.7% | |
| 3808053 | 2004.1.1.415 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, RuvB_N | 0.82 | 77.0 | 6.70e-01 | 100.0% | 91.8% |
| 4028442 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.82 | 67.0 | 6.19e-01 | 84.8% | 87.6% |
| 3733456 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.82 | 78.0 | 6.14e-01 | 100.0% | 66.9% |
| None | — | 0.82 | 70.0 | 6.52e-01 | 88.7% | 89.4% | |
| None | — | 0.82 | 70.0 | 6.58e-01 | 88.7% | 92.0% | |
| None | — | 0.82 | 69.0 | 6.66e-01 | 88.7% | 94.1% | |
| 3331361 | 2004.1.1.425 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, DUF815 | 0.82 | 77.0 | 6.74e-01 | 100.0% | 91.2% |
| None | — | 0.82 | 77.0 | 5.91e-01 | 100.0% | 67.6% | |
| 3370846 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.82 | 77.0 | 5.44e-01 | 100.0% | 45.2% |
| 4290912 | 2004.1.1.432 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, Rad17 | 0.82 | 70.0 | 6.54e-01 | 89.4% | 92.2% |
| 4506764 | 2004.1.1.425 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, DUF815 | 0.82 | 69.0 | 6.74e-01 | 88.1% | 94.4% |
| 5036743 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.82 | 69.0 | 6.49e-01 | 88.7% | 97.8% |
| None | — | 0.82 | 69.0 | 6.81e-01 | 88.7% | 99.4% | |
| None | — | 0.81 | 77.0 | 7.00e-01 | 100.0% | 95.4% | |
| 3744472 | 304.107.1.0 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain | 0.81 | 77.0 | 5.67e-01 | 100.0% | 50.6% |
| 3432828 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.81 | 76.0 | 5.69e-01 | 100.0% | 59.1% |
| 3450222 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.81 | 68.0 | 6.43e-01 | 87.4% | 97.1% |
| 4069782 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.81 | 69.0 | 5.61e-01 | 89.4% | 60.4% |
| 3820521 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.81 | 76.0 | 5.90e-01 | 100.0% | 65.2% |
| 4998715 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.81 | 68.0 | 6.79e-01 | 88.1% | 97.4% |
| 4465649 | 2004.1.1.432 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, Rad17 | 0.81 | 68.0 | 6.78e-01 | 88.1% | 92.9% |
| 5028604 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.81 | 69.0 | 6.90e-01 | 89.4% | 96.8% |
| 3540995 | 2004.1.1.189 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 | 0.81 | 68.0 | 6.27e-01 | 88.7% | 92.6% |
| 4947826 | 2004.1.1.1214 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RCF1-5-like_lid | 0.80 | 68.0 | 6.72e-01 | 89.4% | 95.0% |
| 4982783 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.80 | 67.0 | 6.60e-01 | 88.1% | 91.9% |
| 5054576 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.80 | 67.0 | 5.29e-01 | 88.1% | 49.0% |
| 4354898 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.80 | 75.0 | 6.79e-01 | 98.7% | 99.5% |
| 4972258 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.80 | 68.0 | 6.54e-01 | 89.4% | 93.5% |
| 3576751 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.80 | 75.0 | 6.43e-01 | 99.3% | 80.0% |
| None | — | 0.80 | 67.0 | 6.68e-01 | 88.1% | 92.9% | |
| 3224330 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.79 | 65.0 | 6.77e-01 | 86.1% | 98.6% |
| 3867032 | 2004.1.1.98 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad17 | 0.79 | 66.0 | 5.28e-01 | 88.1% | 67.4% |
| 5057591 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.79 | 63.0 | 6.71e-01 | 88.1% | 93.3% |
| 5002765 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.79 | 72.0 | 6.79e-01 | 98.0% | 95.0% |
| 4943098 | 2004.1.1.1214 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RCF1-5-like_lid | 0.78 | 66.0 | 5.89e-01 | 88.1% | 72.7% |
| 4994658 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.78 | 66.0 | 6.11e-01 | 88.7% | 95.1% |
| 3188500 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.78 | 66.0 | 5.88e-01 | 89.4% | 77.5% |
| 3838853 | 2004.1.1.125 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RuvB_N | 0.78 | 66.0 | 6.73e-01 | 88.1% | 95.2% |
| 3257173 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.77 | 63.0 | 5.69e-01 | 84.8% | 99.0% |
| 2648718 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.77 | 65.0 | 5.78e-01 | 88.7% | 88.5% |
| 3271689 | 2004.1.1.98 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad17 | 0.77 | 64.0 | 4.74e-01 | 88.1% | 49.7% |
| 3489109 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.77 | 64.0 | 5.28e-01 | 88.1% | 80.0% |
| 3700966 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.76 | 72.0 | 5.20e-01 | 100.0% | 50.5% |
| 4022961 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.76 | 72.0 | 6.13e-01 | 100.0% | 86.5% |
| 3505081 | 2004.1.1.98 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad17 | 0.76 | 63.0 | 5.76e-01 | 88.1% | 95.4% |
| 4018671 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.76 | 71.0 | 5.75e-01 | 100.0% | 90.0% |
| 3622561 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.75 | 62.0 | 6.00e-01 | 86.1% | 86.7% |
| 3703764 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.75 | 64.0 | 5.91e-01 | 91.4% | 90.5% |
| 4279180 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.74 | 62.0 | 6.10e-01 | 87.4% | 86.3% |
| 3954923 | 2004.1.1.343 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 | 0.74 | 59.0 | 5.28e-01 | 84.8% | 62.0% |
| 1112963 | 2004.1.1.35 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Bac_DnaA | 0.74 | 61.0 | 6.25e-01 | 86.1% | 97.2% |
| 3677330 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.72 | 59.0 | 5.67e-01 | 85.4% | 93.5% |
| 4370162 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.71 | 56.0 | 6.04e-01 | 83.4% | 96.9% |
| 4033661 | 2004.1.1.263 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF3388 | 0.70 | 56.0 | 5.80e-01 | 85.4% | 89.3% |
| 4142504 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.68 | 60.0 | 5.35e-01 | 94.7% | 96.7% |
| 3996272 | 2006.1.1.11 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 | 0.68 | 54.0 | 4.87e-01 | 84.8% | 65.2% |
| 3845288 | 2006.1.1.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.68 | 55.0 | 4.90e-01 | 85.4% | 63.8% |
| None | — | 0.68 | 55.0 | 4.91e-01 | 86.1% | 64.3% | |
| 4018832 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.66 | 53.0 | 4.64e-01 | 85.4% | 69.1% |
| 3728322 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.66 | 52.0 | 3.53e-01 | 84.8% | 23.1% |
| 4024370 | 7577.1.1.5 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › SHMT | 0.65 | 45.0 | 3.64e-01 | 70.2% | 53.9% |
| 2051774 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.60 | 48.0 | 4.49e-01 | 86.1% | 69.9% |
| 4002138 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.59 | 47.0 | 3.97e-01 | 86.1% | 49.2% |
D4
high
residues 368-429
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gmqA00 | 1.10.8.840 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ribosome-associated complex head domain | 0.67 | 54.0 | 4.79e-01 | 90.3% | 87.0% |
| 1ysyA00 | 1.10.8.370 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › nsp7 replicase | 0.65 | 48.0 | 4.46e-01 | 83.9% | 71.8% |
| 3uk6A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.65 | 52.0 | 4.80e-01 | 93.5% | 90.4% |
| 2c9oB03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.64 | 55.0 | 5.08e-01 | 100.0% | 97.6% |
| 3u61D03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.64 | 49.0 | 4.35e-01 | 83.9% | 64.8% |
| 4kjmA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.62 | 42.0 | 4.38e-01 | 71.0% | 85.5% |
| 7kz9A02 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.61 | 45.0 | 3.15e-01 | 79.0% | 30.3% |
| 2cfoA04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.60 | 42.0 | 4.36e-01 | 74.2% | 96.3% |
| 3zwbA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.58 | 50.0 | 3.24e-01 | 98.4% | 53.8% |
| 1o0wA01 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.54 | 42.0 | 3.28e-01 | 90.3% | 70.8% |
| 3e22A03 | 1.10.287.600 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.52 | 38.0 | 4.05e-01 | 96.8% | 88.9% |
| 4bqhA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.51 | 42.0 | 2.58e-01 | 100.0% | 71.2% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5046377 | 632.19.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A | 0.74 | 57.0 | 4.94e-01 | 83.9% | 91.6% |
| 4928778 | 3317.1.1.0 ↗ | alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain | 0.70 | 54.0 | 5.53e-01 | 87.1% | 100.0% |
| 5052347 | 3317.1.1.0 ↗ | alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain | 0.70 | 50.0 | 5.22e-01 | 75.8% | 85.5% |
| 3538104 | 7061.1.1.1 ↗ | few secondary structure elements › VWF C8-3 module › VWF C8-3 module › VWF C8-3 module › C8 | 0.67 | 54.0 | 5.11e-01 | 90.3% | 84.0% |
| 3875394 | 5050.1.1.4 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Nucleoside_tran | 0.64 | 47.0 | 3.14e-01 | 79.0% | 31.0% |
| 4958679 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.64 | 53.0 | 3.99e-01 | 98.4% | 66.3% |
| 5078343 | 632.3.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain | 0.64 | 49.0 | 4.87e-01 | 82.3% | 87.5% |
| 3742778 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.63 | 51.0 | 3.62e-01 | 90.3% | 36.4% |
| 4990055 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.63 | 44.0 | 4.63e-01 | 80.6% | 87.3% |
| 3582922 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.62 | 49.0 | 4.54e-01 | 87.1% | 67.5% |
| 3617518 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.60 | 44.0 | 4.28e-01 | 79.0% | 84.3% |
| 3205548 | 632.7.1.51 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › Etd1 | 0.59 | 45.0 | 4.36e-01 | 83.9% | 100.0% |
| 4324173 | 194.1.1.1 ↗ | alpha complex topology › Serum albumin-like › Serum albumin-like › Serum albumin-like › Serum_albumin | 0.59 | 49.0 | 3.63e-01 | 95.2% | 44.1% |
| 3402349 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.55 | 39.0 | 4.03e-01 | 83.9% | 81.7% |