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SR-VP_0-2_scaffold_141_6063796_prodigal-single.1__X__X__00327
Bact-VirSR-VP_0-2_scaffold_141_6063796_prodigal-single.1__X__X__00327
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-124_201-230_260-272
Domain cluster:
rep: KM199771.1__AIK68527.1__Lo5R7ANS_57__00057__D358-488_526-544
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rnsA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.70 | 25.0 | 3.15e-01 | 100.0% | 50.0% |
| 4rd7A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.69 | 26.0 | 3.05e-01 | 100.0% | 47.9% |
| 6m9sD01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.68 | 25.0 | 3.19e-01 | 100.0% | 54.5% |
| 5by5A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 25.0 | 2.92e-01 | 100.0% | 48.7% |
| 1zx5A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 28.0 | 3.98e-01 | 100.0% | 86.7% |
| 2h6cA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 27.0 | 3.07e-01 | 100.0% | 50.4% |
| 2vecA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 25.0 | 3.07e-01 | 100.0% | 56.3% |
| 4yrdA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 27.0 | 3.18e-01 | 100.0% | 56.3% |
| 3ht1A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 24.0 | 2.66e-01 | 100.0% | 42.3% |
| 2vecA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 30.0 | 3.45e-01 | 100.0% | 66.1% |
| 2q30A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 28.0 | 3.80e-01 | 100.0% | 88.6% |
| 4ca9A00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.57 | 26.0 | 3.31e-01 | 100.0% | 71.4% |
| 3e97A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 25.0 | 2.72e-01 | 99.4% | 45.1% |
| 1omiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 26.0 | 3.20e-01 | 99.4% | 65.7% |
| 5j3uA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 25.0 | 2.87e-01 | 100.0% | 52.4% |
| 1v70A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 28.0 | 3.44e-01 | 100.0% | 74.3% |
| 2qjvA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 29.0 | 3.52e-01 | 100.0% | 75.2% |
| 3cjxA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 28.0 | 2.92e-01 | 100.0% | 52.0% |
| 2qvsB02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 27.0 | 3.06e-01 | 100.0% | 58.8% |
| 5d1iA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 24.0 | 2.87e-01 | 99.4% | 56.4% |
| 2pqqA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 25.0 | 2.67e-01 | 100.0% | 46.3% |
| 3shrA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 25.0 | 2.78e-01 | 100.0% | 51.1% |
| 3k94A00 | 3.40.50.10240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin pyrophosphokinase, catalytic domain | 0.53 | 29.0 | 2.66e-01 | 100.0% | 40.2% |
| 1hw5A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 25.0 | 2.81e-01 | 100.0% | 54.3% |
| 3mdpA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 23.0 | 2.57e-01 | 100.0% | 47.3% |
| 1o5lA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 25.0 | 2.78e-01 | 100.0% | 54.3% |
| 3ejkA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 29.0 | 3.03e-01 | 100.0% | 58.0% |
| 4gwmA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 30.0 | 3.12e-01 | 100.0% | 57.9% |
| 3w5nA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 33.0 | 3.32e-01 | 97.6% | 65.3% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2512620 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.67 | 25.0 | 3.19e-01 | 100.0% | 54.4% |
| 3919527 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.62 | 26.0 | 3.29e-01 | 100.0% | 62.9% |
| 4859377 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.60 | 25.0 | 3.21e-01 | 100.0% | 64.3% |
| 4929792 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.59 | 28.0 | 3.54e-01 | 100.0% | 74.0% |
| 3588172 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.57 | 27.0 | 2.85e-01 | 99.4% | 47.3% |
| 4460606 | 10.32.1.177 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › UPF0669 | 0.56 | 26.0 | 3.15e-01 | 100.0% | 64.5% |
| 3228358 | 10.32.1.258 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_IRG7_N | 0.56 | 32.0 | 4.23e-01 | 98.8% | 100.0% |
| 3796900 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.56 | 29.0 | 3.40e-01 | 99.4% | 68.9% |
| 3220825 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 33.0 | 2.98e-01 | 100.0% | 44.4% |
| 164593 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.55 | 25.0 | 2.67e-01 | 100.0% | 46.3% |
| 5005599 | 10.1.2.201 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PF27237 | 0.54 | 26.0 | 3.37e-01 | 97.6% | 81.1% |
| 4202051 | 10.32.1.271 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF27237 | 0.54 | 26.0 | 3.37e-01 | 97.6% | 81.1% |
| 3943625 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.54 | 26.0 | 2.88e-01 | 100.0% | 54.8% |
| 5042218 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 31.0 | 3.98e-01 | 98.8% | 98.9% |
| 3498341 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.54 | 25.0 | 3.05e-01 | 100.0% | 64.5% |
| 5047633 | 10.1.2.183 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC | 0.54 | 33.0 | 4.04e-01 | 100.0% | 96.2% |
| 5077191 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 32.0 | 3.97e-01 | 97.0% | 99.0% |
| 5033980 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.52 | 24.0 | 2.93e-01 | 100.0% | 62.7% |
| 3708967 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.51 | 25.0 | 2.74e-01 | 100.0% | 51.7% |
| 3282383 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.51 | 24.0 | 2.58e-01 | 99.4% | 47.9% |
| 3214876 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 30.0 | 3.83e-01 | 100.0% | 100.0% |
| 5039646 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.50 | 33.0 | 3.82e-01 | 99.4% | 92.5% |