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SR-VP_0-2_scaffold_141_6534022_prodigal-single.1__X__X__00111
Bact-VirSR-VP_0-2_scaffold_141_6534022_prodigal-single.1__X__X__00111
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-34_76-115
Domain cluster:
rep: LacPavin_0818_WC45_scaffold_160996_curated_closed_complete_prodigal-single.1__X__X__00327__D13-52_90-145
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00856.34 best | SET | 29.2 | 1.50e-06 | 58.1% | 43.8% |
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ynmB00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.89 | 84.0 | 5.96e-01 | 100.0% | 61.7% |
| 3bo5A00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.88 | 84.0 | 5.48e-01 | 100.0% | 74.0% |
| 2rfiB00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.88 | 84.0 | 5.56e-01 | 100.0% | 77.8% |
| 2w5yA01 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.88 | 84.0 | 6.35e-01 | 100.0% | 79.4% |
| 4mi0A00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.88 | 83.0 | 5.80e-01 | 100.0% | 56.2% |
| 1zkkB00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.88 | 83.0 | 6.21e-01 | 100.0% | 77.6% |
| 1ml9A00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.87 | 83.0 | 5.45e-01 | 100.0% | 87.3% |
| 6a5kA03 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.87 | 82.0 | 5.41e-01 | 100.0% | 77.6% |
| 5lszA00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.87 | 82.0 | 5.52e-01 | 100.0% | 49.8% |
| 4nj5A02 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.87 | 82.0 | 5.34e-01 | 100.0% | 79.6% |
| 1mvhA00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.87 | 82.0 | 5.37e-01 | 100.0% | 78.8% |
| 4qenA03 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.87 | 81.0 | 5.39e-01 | 100.0% | 73.6% |
| 4rz0A00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.86 | 79.0 | 6.67e-01 | 97.3% | 94.7% |
| 3qwwA01 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.86 | 75.0 | 6.80e-01 | 91.9% | 100.0% |
| 3ep0A00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.86 | 79.0 | 6.74e-01 | 98.6% | 93.8% |
| 3ru0A01 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.86 | 77.0 | 6.16e-01 | 95.9% | 75.6% |
| 5vacA00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.85 | 80.0 | 5.54e-01 | 100.0% | 79.1% |
| 4ldgA00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.85 | 80.0 | 5.55e-01 | 100.0% | 59.3% |
| 3kmaA00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.85 | 79.0 | 6.88e-01 | 98.6% | 99.0% |
| 2f69A02 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.85 | 80.0 | 6.23e-01 | 100.0% | 89.5% |
| 2qpwA01 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.84 | 77.0 | 6.29e-01 | 97.3% | 91.3% |
| 3qxyA01 | 3.90.1410.10 | Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 1 › set domain protein methyltransferase, domain 1 | 0.84 | 77.0 | 5.19e-01 | 100.0% | 88.1% |
| 3n71A01 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.84 | 78.0 | 7.13e-01 | 100.0% | 95.7% |
| 3db5A00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.82 | 76.0 | 6.28e-01 | 100.0% | 86.3% |
| 3rq4A02 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.82 | 74.0 | 5.85e-01 | 97.3% | 81.7% |
| 6ictA01 | 3.90.1410.10 | Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 1 › set domain protein methyltransferase, domain 1 | 0.80 | 73.0 | 4.72e-01 | 100.0% | 71.6% |
| 3dalA00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.79 | 74.0 | 5.41e-01 | 100.0% | 76.0% |
| 3ihxC01 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.78 | 73.0 | 6.04e-01 | 100.0% | 90.9% |
| 3rayA00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.78 | 72.0 | 5.49e-01 | 100.0% | 80.5% |
| 2h21B01 | 3.90.1410.10 | Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 1 › set domain protein methyltransferase, domain 1 | 0.75 | 68.0 | 4.62e-01 | 100.0% | 87.5% |
| 2ya0A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 45.0 | 4.08e-01 | 93.2% | 87.5% |
| 3lazA01 | 2.30.130.110 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › | 0.54 | 49.0 | 4.79e-01 | 97.3% | 91.1% |
| 2f0cA02 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.54 | 47.0 | 4.28e-01 | 100.0% | 88.5% |
| 1bdoA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.52 | 39.0 | 3.87e-01 | 81.1% | 97.5% |
| 8d40A01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.51 | 45.0 | 4.05e-01 | 100.0% | 72.1% |
ECOD (100)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5028972 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.98 | 95.0 | 7.64e-01 | 100.0% | 90.4% |
| 5056357 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.95 | 92.0 | 6.95e-01 | 100.0% | 74.7% |
| 3479005 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.91 | 86.0 | 6.42e-01 | 98.6% | 77.8% |
| 4210245 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.90 | 86.0 | 6.55e-01 | 100.0% | 79.3% |
| 3831282 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.90 | 85.0 | 5.79e-01 | 100.0% | 85.2% |
| 3554684 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.90 | 85.0 | 6.18e-01 | 100.0% | 66.1% |
| 3360524 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.90 | 85.0 | 5.83e-01 | 100.0% | 54.1% |
| 3300075 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.89 | 85.0 | 5.77e-01 | 100.0% | 82.2% |
| 4981621 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.89 | 83.0 | 6.25e-01 | 100.0% | 65.9% |
| 3628408 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.89 | 84.0 | 6.03e-01 | 100.0% | 66.5% |
| 3720868 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.89 | 84.0 | 5.62e-01 | 100.0% | 87.9% |
| 3930039 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.88 | 84.0 | 6.28e-01 | 100.0% | 74.4% |
| 3187420 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.88 | 83.0 | 5.61e-01 | 100.0% | 72.0% |
| 4030291 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.88 | 83.0 | 5.87e-01 | 100.0% | 75.5% |
| 3168623 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.88 | 84.0 | 5.50e-01 | 100.0% | 46.5% |
| 3805692 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.88 | 83.0 | 5.62e-01 | 100.0% | 71.9% |
| 3516459 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.88 | 83.0 | 5.86e-01 | 100.0% | 70.0% |
| 3931363 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.88 | 83.0 | 6.20e-01 | 100.0% | 75.0% |
| 3801432 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.88 | 83.0 | 5.80e-01 | 100.0% | 72.1% |
| 3842741 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.88 | 83.0 | 5.63e-01 | 100.0% | 71.1% |
| 3598476 | 70.3.1.11 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND | 0.88 | 78.0 | 5.12e-01 | 94.6% | 88.5% |
| 3213216 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.88 | 82.0 | 5.98e-01 | 100.0% | 75.6% |
| 3790011 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.87 | 82.0 | 5.63e-01 | 100.0% | 55.6% |
| 3435068 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.87 | 82.0 | 5.46e-01 | 100.0% | 70.8% |
| 4048281 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.87 | 82.0 | 5.49e-01 | 100.0% | 58.8% |
| 4014926 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.87 | 81.0 | 5.70e-01 | 100.0% | 71.0% |
| 3795311 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.87 | 82.0 | 5.84e-01 | 100.0% | 64.1% |
| 3770944 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.87 | 82.0 | 5.45e-01 | 100.0% | 47.5% |
| 3655593 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.87 | 82.0 | 5.63e-01 | 100.0% | 75.9% |
| 3601100 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.87 | 82.0 | 5.90e-01 | 100.0% | 55.1% |
| 3229357 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.87 | 82.0 | 5.99e-01 | 100.0% | 75.4% |
| 4631087 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.87 | 81.0 | 5.59e-01 | 100.0% | 53.8% |
| 3489471 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.87 | 82.0 | 5.80e-01 | 100.0% | 73.8% |
| 4013445 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.87 | 79.0 | 5.40e-01 | 97.3% | 64.3% |
| 3480469 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.86 | 81.0 | 5.57e-01 | 100.0% | 56.0% |
| 3190867 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.86 | 80.0 | 5.53e-01 | 100.0% | 68.4% |
| 3998709 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.86 | 81.0 | 6.01e-01 | 100.0% | 76.5% |
| 3353301 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.86 | 78.0 | 5.10e-01 | 97.3% | 85.3% |
| 4026058 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.86 | 81.0 | 5.42e-01 | 100.0% | 58.4% |
| 3723104 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.86 | 80.0 | 6.49e-01 | 100.0% | 90.8% |
| 3642675 | 70.3.1.11 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND | 0.86 | 80.0 | 5.16e-01 | 100.0% | 86.7% |
| 4023500 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.86 | 80.0 | 5.38e-01 | 100.0% | 67.3% |
| 3379022 | 70.3.1.11 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND | 0.86 | 79.0 | 5.09e-01 | 98.6% | 86.1% |
| 3599283 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.86 | 80.0 | 6.19e-01 | 98.6% | 82.1% |
| 3739593 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.85 | 79.0 | 5.25e-01 | 100.0% | 87.5% |
| 3487452 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.85 | 81.0 | 5.62e-01 | 100.0% | 76.2% |
| 3195285 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.85 | 80.0 | 5.34e-01 | 100.0% | 61.6% |
| 3610479 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.85 | 79.0 | 6.17e-01 | 97.3% | 84.3% |
| 3700733 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.85 | 80.0 | 5.67e-01 | 100.0% | 50.5% |
| 3189481 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.85 | 80.0 | 5.52e-01 | 100.0% | 87.3% |
| 4880894 | 377.9.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND | 0.85 | 78.0 | 5.18e-01 | 98.6% | 88.4% |
| 3816328 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.85 | 79.0 | 5.10e-01 | 100.0% | 88.2% |
| 3735070 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.85 | 79.0 | 5.30e-01 | 100.0% | 66.7% |
| 3190685 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.85 | 77.0 | 5.57e-01 | 97.3% | 86.8% |
| 3921916 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.85 | 79.0 | 5.68e-01 | 100.0% | 67.2% |
| 3395720 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.85 | 78.0 | 5.05e-01 | 97.3% | 89.1% |
| 4016856 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.85 | 79.0 | 5.33e-01 | 100.0% | 67.3% |
| 3737853 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.85 | 79.0 | 5.29e-01 | 100.0% | 88.0% |
| 3741658 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.85 | 79.0 | 5.32e-01 | 100.0% | 84.1% |
| 3189211 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.84 | 78.0 | 5.27e-01 | 100.0% | 60.8% |
| 3596062 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.84 | 79.0 | 6.33e-01 | 98.6% | 80.8% |
| 3566461 | 70.3.1.11 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND | 0.84 | 78.0 | 4.92e-01 | 100.0% | 85.3% |
| 3632725 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.84 | 77.0 | 5.10e-01 | 100.0% | 87.9% |
| 3706196 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.84 | 78.0 | 4.92e-01 | 100.0% | 89.7% |
| 3594045 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.84 | 78.0 | 5.03e-01 | 100.0% | 82.6% |
| 3837237 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.84 | 78.0 | 5.03e-01 | 100.0% | 80.3% |
| 4015470 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.84 | 78.0 | 5.44e-01 | 100.0% | 76.3% |
| 4418868 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.84 | 78.0 | 4.92e-01 | 100.0% | 84.5% |
| 3730913 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.84 | 77.0 | 5.25e-01 | 100.0% | 62.9% |
| 3416977 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.84 | 76.0 | 4.99e-01 | 97.3% | 89.8% |
| 3262764 | 70.3.1.11 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND | 0.84 | 77.0 | 5.45e-01 | 100.0% | 62.9% |
| 4603710 | 70.3.1.11 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND | 0.84 | 77.0 | 4.94e-01 | 100.0% | 93.1% |
| 3410920 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.83 | 77.0 | 5.05e-01 | 100.0% | 84.6% |
| 3773127 | 70.3.1.11 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND | 0.83 | 77.0 | 4.53e-01 | 100.0% | 51.5% |
| 3743671 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.83 | 76.0 | 5.73e-01 | 98.6% | 82.4% |
| 3726834 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.83 | 76.0 | 5.58e-01 | 98.6% | 81.7% |
| 4012091 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.83 | 77.0 | 5.07e-01 | 100.0% | 62.9% |
| 4011557 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.83 | 77.0 | 5.17e-01 | 100.0% | 66.0% |
| 3399222 | 70.3.1.2 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › zf-MYND | 0.83 | 76.0 | 4.89e-01 | 100.0% | 87.0% |
| 3641242 | 70.3.1.11 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND | 0.83 | 77.0 | 4.76e-01 | 100.0% | 83.7% |
| 3396018 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.83 | 74.0 | 4.91e-01 | 97.3% | 90.2% |
| 4629018 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.82 | 77.0 | 4.92e-01 | 100.0% | 82.9% |
| 3272079 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.82 | 76.0 | 4.88e-01 | 100.0% | 87.4% |
| 4633579 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.82 | 75.0 | 5.07e-01 | 100.0% | 86.7% |
| 3193960 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.82 | 76.0 | 5.12e-01 | 100.0% | 68.4% |
| 3917273 | 70.3.1.11 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND | 0.82 | 75.0 | 4.75e-01 | 100.0% | 90.3% |
| 3403081 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.82 | 75.0 | 4.99e-01 | 100.0% | 86.5% |
| 3380509 | 70.3.1.11 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND | 0.81 | 76.0 | 4.58e-01 | 100.0% | 86.4% |
| 3607870 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.81 | 75.0 | 4.84e-01 | 100.0% | 88.3% |
| 3783216 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.81 | 75.0 | 4.86e-01 | 100.0% | 85.4% |
| 3248875 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.81 | 74.0 | 4.94e-01 | 100.0% | 84.1% |
| 3271772 | 70.3.1.11 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND | 0.81 | 75.0 | 4.90e-01 | 100.0% | 87.4% |
| 3264863 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.81 | 74.0 | 4.78e-01 | 100.0% | 88.1% |
| 3518389 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.80 | 73.0 | 4.68e-01 | 100.0% | 71.7% |
| 2526541 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.80 | 73.0 | 4.69e-01 | 100.0% | 70.7% |
| 3403295 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.79 | 71.0 | 4.74e-01 | 97.3% | 89.4% |
| 3699656 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.78 | 73.0 | 5.70e-01 | 100.0% | 66.9% |
| 3271649 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.78 | 70.0 | 4.73e-01 | 100.0% | 89.2% |
| 3653656 | 70.3.1.21 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › TCR | 0.66 | 62.0 | 4.70e-01 | 100.0% | 84.4% |
| 3370438 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.66 | 62.0 | 4.99e-01 | 100.0% | 80.8% |
D2
medium
residues 35-75_116-130
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vvbA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.64 | 44.0 | 2.82e-01 | 73.2% | 30.4% |
| 5xyiK00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 40.0 | 3.48e-01 | 71.4% | 55.6% |
| 5b2nA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.57 | 38.0 | 2.56e-01 | 71.4% | 32.3% |
| 1r7jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 38.0 | 3.32e-01 | 71.4% | 70.0% |
| 1wihA00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.56 | 39.0 | 3.39e-01 | 73.2% | 51.2% |
| 2ccqA00 | 1.20.58.2190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 37.0 | 3.21e-01 | 73.2% | 54.5% |
| 5hvqC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 38.0 | 3.19e-01 | 73.2% | 59.2% |
| 3pcoB04 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.54 | 37.0 | 3.41e-01 | 71.4% | 61.3% |
| 3c9aA01 | 2.20.20.160 | Mainly Beta › Single Sheet › Anthopleurin-A › | 0.54 | 37.0 | 3.39e-01 | 73.2% | 82.9% |
| 2r0xA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 36.0 | 2.73e-01 | 71.4% | 61.5% |
| 7pzaA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 36.0 | 3.27e-01 | 73.2% | 72.1% |
| 3cdhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 36.0 | 2.82e-01 | 71.4% | 40.3% |
| 4mo0A00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.52 | 36.0 | 3.24e-01 | 73.2% | 60.8% |
| 4nwbA02 | 3.90.105.20 | Alpha Beta › Alpha-Beta Complex › Molybdopterin biosynthesis moea protein, domain 2 › Ribosomal protein L10, N-terminal fragment, domain II | 0.52 | 36.0 | 3.22e-01 | 73.2% | 80.2% |
| 2f69A02 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.52 | 41.0 | 3.20e-01 | 94.6% | 97.2% |
| 3d0sA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 35.0 | 3.28e-01 | 73.2% | 77.5% |
| 6nuiA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 38.0 | 2.64e-01 | 78.6% | 80.2% |
| 3to7A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 35.0 | 3.21e-01 | 71.4% | 60.5% |
| 1dq3A03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.51 | 35.0 | 3.05e-01 | 73.2% | 65.5% |
| 3fx3B02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 34.0 | 3.02e-01 | 73.2% | 56.8% |
| 3v8xA01 | 2.170.130.10 | Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › TonB-dependent receptor, plug domain | 0.50 | 37.0 | 2.94e-01 | 82.1% | 90.2% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3715572 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.65 | 55.0 | 3.58e-01 | 100.0% | 52.9% |
| 5066705 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 43.0 | 4.06e-01 | 71.4% | 61.4% |
| 3207062 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.63 | 43.0 | 2.75e-01 | 73.2% | 14.0% |
| 3618490 | 101.1.2.416 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_Egal | 0.61 | 41.0 | 3.49e-01 | 71.4% | 62.1% |
| 4188685 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.61 | 42.0 | 2.72e-01 | 73.2% | 14.9% |
| 3607656 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.59 | 41.0 | 3.43e-01 | 73.2% | 50.5% |
| 5071075 | 101.1.2.927 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7347 | 0.59 | 40.0 | 3.51e-01 | 71.4% | 55.3% |
| 3709334 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.58 | 40.0 | 3.38e-01 | 73.2% | 48.4% |
| 4993180 | 183.1.1.1 ↗ | alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Fe_dep_repr_C | 0.58 | 39.0 | 3.10e-01 | 73.2% | 35.4% |
| 3627952 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.57 | 39.0 | 2.69e-01 | 73.2% | 45.7% |
| 5054231 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 38.0 | 3.50e-01 | 71.4% | 61.3% |
| 3984647 | 288.1.1.1 ↗ | a+b four layers › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases › Cu-oxidase_4 | 0.55 | 37.0 | 2.47e-01 | 71.4% | 36.6% |
| 5000489 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.54 | 37.0 | 3.01e-01 | 73.2% | 55.7% |
| 4632150 | 304.56.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like | 0.54 | 39.0 | 3.29e-01 | 76.8% | 90.5% |
| 3550852 | 101.1.2.86 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 | 0.54 | 38.0 | 3.16e-01 | 73.2% | 58.0% |
| 4998403 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.54 | 37.0 | 2.97e-01 | 73.2% | 38.9% |
| 5039174 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.53 | 37.0 | 3.63e-01 | 73.2% | 68.3% |
| 3625412 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 36.0 | 3.03e-01 | 73.2% | 72.5% |
| 4929591 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.52 | 36.0 | 3.12e-01 | 73.2% | 52.8% |
| 4127496 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.52 | 44.0 | 4.06e-01 | 100.0% | 96.0% |
| 3988570 | 304.136.1.1 ↗ | a+b two layers › Alpha-beta plaits › Oligo-peptide binding protein (OPPA) insertion domain › Oligo-peptide binding protein (OPPA) insertion domain › SBP_bac_5 | 0.51 | 39.0 | 3.15e-01 | 89.3% | 75.8% |
| 3862939 | 327.11.2.53 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF27824 | 0.50 | 35.0 | 2.96e-01 | 71.4% | 44.4% |
| 3194622 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.50 | 35.0 | 2.99e-01 | 73.2% | 53.7% |
| 4501883 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.50 | 34.0 | 2.14e-01 | 73.2% | 15.7% |