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SR-VP_0-2_scaffold_141_6534022_prodigal-single.1__X__X__00220
Bact-VirSR-VP_0-2_scaffold_141_6534022_prodigal-single.1__X__X__00220
Identity
- Kingdom:
- phage
Quality
56.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-171
Domain cluster:
rep: rifoxyc1_full_scaffold_3_prodigal-single.1__X__X__00157__D2-120
CATH (86)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1p8jA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.76 | 55.0 | 6.20e-01 | 99.4% | 95.5% |
| 2w47A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.76 | 57.0 | 6.38e-01 | 98.8% | 97.8% |
| 4zxeC00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.75 | 57.0 | 6.34e-01 | 97.6% | 98.5% |
| 5ikuA01 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 45.0 | 5.63e-01 | 88.2% | 100.0% |
| 4il7A00 | 2.60.120.1300 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 38.0 | 5.21e-01 | 78.8% | 100.0% |
| 2waaA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.72 | 49.0 | 5.65e-01 | 98.2% | 94.3% |
| 1w99A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.72 | 64.0 | 6.13e-01 | 99.4% | 83.2% |
| 1wkyA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.72 | 58.0 | 6.26e-01 | 97.6% | 100.0% |
| 2df7A02 | 2.60.120.660 | Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus | 0.71 | 56.0 | 6.07e-01 | 100.0% | 99.3% |
| 2c9kA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.71 | 58.0 | 5.94e-01 | 99.4% | 88.4% |
| 5v00B01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.70 | 29.0 | 4.11e-01 | 79.4% | 79.3% |
| 3nngA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.69 | 58.0 | 6.08e-01 | 99.4% | 97.4% |
| 4gwmA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 62.0 | 6.33e-01 | 98.2% | 98.2% |
| 2w5fB01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.69 | 57.0 | 6.05e-01 | 98.8% | 98.0% |
| 4h3wA02 | 2.60.120.1260 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 55.0 | 5.79e-01 | 100.0% | 94.1% |
| 1cx1A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.68 | 57.0 | 5.98e-01 | 98.8% | 98.0% |
| 3qdhA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.67 | 49.0 | 5.15e-01 | 97.6% | 82.1% |
| 3winE03 | 2.60.120.1090 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 43.0 | 5.24e-01 | 92.4% | 100.0% |
| 2zewB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.67 | 55.0 | 5.89e-01 | 98.2% | 99.3% |
| 2c9aA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 59.0 | 6.03e-01 | 97.1% | 97.5% |
| 2rttA00 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.67 | 39.0 | 4.74e-01 | 95.9% | 91.4% |
| 5y4mA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.66 | 56.0 | 5.89e-01 | 99.4% | 100.0% |
| 2q1fA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.66 | 55.0 | 5.63e-01 | 97.1% | 89.8% |
| 1k42A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.66 | 60.0 | 6.07e-01 | 97.1% | 98.8% |
| 2c4xA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.66 | 56.0 | 5.84e-01 | 96.5% | 98.7% |
| 3j4uH00 | 2.60.120.1110 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 47.0 | 5.13e-01 | 97.1% | 89.3% |
| 1mpxA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.66 | 61.0 | 5.39e-01 | 99.4% | 93.7% |
| 4xuoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.65 | 55.0 | 5.76e-01 | 100.0% | 98.1% |
| 4bq2D01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.65 | 59.0 | 5.66e-01 | 95.9% | 96.3% |
| 3m1hD00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 59.0 | 5.85e-01 | 97.6% | 100.0% |
| 1dyoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.64 | 54.0 | 5.67e-01 | 98.8% | 98.1% |
| 2vm9A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.64 | 54.0 | 5.71e-01 | 100.0% | 100.0% |
| 4zchA01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 47.0 | 5.33e-01 | 98.8% | 100.0% |
| 1gv9A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 59.0 | 5.35e-01 | 99.4% | 99.6% |
| 2x29A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 51.0 | 5.28e-01 | 100.0% | 91.0% |
| 2e26A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 53.0 | 5.54e-01 | 98.2% | 98.1% |
| 1jhnA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 57.0 | 5.13e-01 | 97.6% | 91.8% |
| 1lnsA04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 58.0 | 5.63e-01 | 99.4% | 90.3% |
| 1fx5B00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 57.0 | 5.11e-01 | 100.0% | 99.6% |
| 2vtfA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.62 | 56.0 | 5.56e-01 | 97.1% | 97.7% |
| 4rft000 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 52.0 | 5.29e-01 | 100.0% | 92.6% |
| 3vgiA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.61 | 54.0 | 4.66e-01 | 96.5% | 90.0% |
| 5t5lA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 56.0 | 5.07e-01 | 99.4% | 99.6% |
| 2durB01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 55.0 | 4.93e-01 | 95.9% | 90.8% |
| 4ypjA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 42.0 | 4.87e-01 | 86.5% | 98.3% |
| 5zruA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 53.0 | 5.48e-01 | 97.1% | 100.0% |
| 4indA03 | 2.60.120.1330 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 40.0 | 4.66e-01 | 96.5% | 94.1% |
| 3zypA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 54.0 | 4.98e-01 | 95.9% | 97.7% |
| 1dhkB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 55.0 | 5.27e-01 | 98.2% | 99.0% |
| 1o91A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 44.0 | 4.96e-01 | 99.4% | 99.2% |
| 1oq1B00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 55.0 | 5.05e-01 | 99.4% | 98.6% |
| 2hevF00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 41.0 | 4.71e-01 | 99.4% | 95.2% |
| 5k0uB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 55.0 | 4.91e-01 | 100.0% | 74.9% |
| 4mxwD00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 45.0 | 5.00e-01 | 99.4% | 100.0% |
| 2x9zA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 46.0 | 4.88e-01 | 97.6% | 94.0% |
| 4m00A01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 53.0 | 4.72e-01 | 97.1% | 99.2% |
| 1fmd200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 50.0 | 4.60e-01 | 100.0% | 71.1% |
| 3ammA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.58 | 51.0 | 4.54e-01 | 97.1% | 94.5% |
| 2y26A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 51.0 | 4.04e-01 | 98.8% | 46.8% |
| 1kxgA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 46.0 | 4.98e-01 | 100.0% | 98.6% |
| 1tme300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 53.0 | 4.78e-01 | 100.0% | 76.1% |
| 1alyA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 45.0 | 4.85e-01 | 99.4% | 96.6% |
| 1pgw200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 52.0 | 4.10e-01 | 100.0% | 47.9% |
| 3hbkA00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.57 | 52.0 | 4.68e-01 | 98.2% | 94.4% |
| 3azwA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 52.0 | 4.67e-01 | 98.8% | 88.7% |
| 1nkgA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 51.0 | 5.14e-01 | 97.1% | 98.8% |
| 4qpiC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 52.0 | 4.59e-01 | 100.0% | 74.4% |
| 1m06G00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 49.0 | 4.80e-01 | 96.5% | 90.4% |
| 1b35B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 51.0 | 4.43e-01 | 100.0% | 65.9% |
| 1j1tA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 49.0 | 4.50e-01 | 97.6% | 98.7% |
| 1tg7A05 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 45.0 | 4.44e-01 | 90.6% | 81.8% |
| 5j98B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 50.0 | 4.38e-01 | 100.0% | 73.5% |
| 3gbwA00 | 2.60.120.820 | Mainly Beta › Sandwich › Jelly Rolls › PHR domain | 0.55 | 47.0 | 4.88e-01 | 96.5% | 97.5% |
| 2khaA01 | 2.60.40.2140 | Mainly Beta › Sandwich › Immunoglobulin-like › Beta-1,3-glucan-recognition protein, N-terminal domain | 0.54 | 31.0 | 3.84e-01 | 83.5% | 93.1% |
| 3ks7A02 | 2.60.120.230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 50.0 | 4.91e-01 | 100.0% | 99.4% |
| 1mec100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 49.0 | 4.19e-01 | 100.0% | 78.1% |
| 1pgl100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 49.0 | 4.77e-01 | 100.0% | 91.4% |
| 6jhsA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 49.0 | 4.21e-01 | 99.4% | 66.9% |
| 1a6cA02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 45.0 | 4.55e-01 | 100.0% | 92.7% |
| 2izwC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 46.0 | 4.39e-01 | 100.0% | 78.8% |
| 2y26A02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 44.0 | 4.53e-01 | 99.4% | 93.2% |
| 2tbvA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 45.0 | 3.83e-01 | 100.0% | 55.2% |
| 3v0aB03 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 48.0 | 4.49e-01 | 98.2% | 92.7% |
| 4dmiA02 | 2.60.120.1010 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 35.0 | 3.81e-01 | 100.0% | 83.2% |
| 4qkbA00 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.51 | 41.0 | 3.98e-01 | 91.8% | 76.2% |
| 1f8vC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 46.0 | 3.82e-01 | 100.0% | 92.9% |
ECOD (89)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4942547 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.88 | 79.0 | 7.62e-01 | 100.0% | 83.7% |
| 4954081 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.85 | 77.0 | 8.00e-01 | 98.8% | 100.0% |
| 4954556 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.84 | 80.0 | 7.77e-01 | 99.4% | 98.9% |
| 3891946 | 10.32.1.6 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein | 0.76 | 57.0 | 5.61e-01 | 100.0% | 72.8% |
| 4999350 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.76 | 60.0 | 6.56e-01 | 95.9% | 100.0% |
| 3827637 | 207.1.1.37 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › C-JID | 0.76 | 48.0 | 4.24e-01 | 98.8% | 44.5% |
| 5020148 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.75 | 67.0 | 6.94e-01 | 98.2% | 100.0% |
| 3661818 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.75 | 49.0 | 5.90e-01 | 92.4% | 100.0% |
| 5042811 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.75 | 52.0 | 6.04e-01 | 99.4% | 99.2% |
| 3925162 | 10.32.1.72 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD | 0.75 | 48.0 | 5.90e-01 | 92.4% | 100.0% |
| 4662876 | 10.32.1.25 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FlhE | 0.74 | 50.0 | 5.81e-01 | 98.8% | 95.8% |
| 3624575 | 10.32.1.72 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD | 0.74 | 50.0 | 5.93e-01 | 93.5% | 98.3% |
| 4955347 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.73 | 45.0 | 5.61e-01 | 71.8% | 100.0% |
| 3888045 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.72 | 61.0 | 5.90e-01 | 100.0% | 80.5% |
| 3781122 | 10.32.1.6 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein | 0.72 | 58.0 | 5.74e-01 | 100.0% | 80.0% |
| 3973967 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.72 | 43.0 | 5.39e-01 | 71.8% | 100.0% |
| 2418779 | 10.2.1.60 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › STIV_penton_2nd | 0.71 | 38.0 | 5.07e-01 | 92.9% | 97.7% |
| 3805836 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.71 | 50.0 | 5.57e-01 | 97.6% | 90.4% |
| 3941823 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.70 | 58.0 | 6.17e-01 | 98.8% | 98.7% |
| 5038595 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.70 | 55.0 | 6.03e-01 | 100.0% | 100.0% |
| 2790636 | 10.32.1.62 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › SGBP_B_XBD | 0.70 | 64.0 | 6.30e-01 | 97.6% | 100.0% |
| 3805853 | 10.32.1.192 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID | 0.70 | 54.0 | 5.15e-01 | 84.1% | 69.7% |
| 4426314 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.70 | 57.0 | 6.11e-01 | 97.1% | 100.0% |
| 3533957 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.69 | 56.0 | 6.05e-01 | 97.1% | 99.3% |
| 3260805 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.69 | 63.0 | 5.99e-01 | 96.5% | 100.0% |
| 3756345 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.69 | 59.0 | 6.08e-01 | 100.0% | 95.0% |
| 4157043 | 10.32.1.62 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › SGBP_B_XBD | 0.69 | 63.0 | 6.18e-01 | 97.6% | 98.3% |
| 3597601 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.68 | 48.0 | 5.34e-01 | 97.1% | 92.3% |
| 1412423 | 10.32.1.72 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD | 0.68 | 49.0 | 5.51e-01 | 98.2% | 96.9% |
| 3531351 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.68 | 58.0 | 5.13e-01 | 100.0% | 63.3% |
| 3789651 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.68 | 43.0 | 5.25e-01 | 78.8% | 99.1% |
| 4102071 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.67 | 56.0 | 5.97e-01 | 97.6% | 100.0% |
| 4099249 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.67 | 58.0 | 6.05e-01 | 98.2% | 100.0% |
| 4305531 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.67 | 55.0 | 5.78e-01 | 96.5% | 95.5% |
| 4304353 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.67 | 57.0 | 5.92e-01 | 100.0% | 98.7% |
| 3345756 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.66 | 49.0 | 4.16e-01 | 99.4% | 46.9% |
| 5032741 | 10.2.1.75 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CBM96 | 0.66 | 60.0 | 6.05e-01 | 97.6% | 100.0% |
| 4937335 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.66 | 57.0 | 5.78e-01 | 98.8% | 92.9% |
| 1209559 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.66 | 56.0 | 5.83e-01 | 96.5% | 98.1% |
| 1159 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.66 | 61.0 | 5.43e-01 | 99.4% | 95.7% |
| 1563470 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.65 | 56.0 | 5.71e-01 | 100.0% | 94.5% |
| 3728710 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.65 | 57.0 | 5.79e-01 | 100.0% | 94.1% |
| 4012587 | 10.32.1.232 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4360 | 0.65 | 59.0 | 5.96e-01 | 100.0% | 99.4% |
| 3244538 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.65 | 51.0 | 4.73e-01 | 100.0% | 65.1% |
| 3700818 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.64 | 59.0 | 5.79e-01 | 98.2% | 96.7% |
| 5059291 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.64 | 57.0 | 5.86e-01 | 95.3% | 100.0% |
| 3270665 | 10.32.1.3 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III | 0.64 | 45.0 | 5.15e-01 | 99.4% | 97.6% |
| 3620780 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.64 | 58.0 | 5.68e-01 | 97.1% | 97.3% |
| 5041444 | 10.1.2.184 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C | 0.64 | 59.0 | 5.91e-01 | 100.0% | 96.6% |
| 3057120 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.64 | 59.0 | 5.59e-01 | 99.4% | 97.5% |
| 3424937 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.64 | 59.0 | 5.85e-01 | 99.4% | 96.0% |
| 4979092 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.64 | 53.0 | 4.12e-01 | 88.2% | 46.6% |
| 4136414 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.63 | 54.0 | 5.59e-01 | 98.8% | 95.6% |
| 3971638 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.63 | 43.0 | 5.01e-01 | 72.9% | 100.0% |
| 4425437 | 10.1.1.2 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB | 0.63 | 58.0 | 4.95e-01 | 100.0% | 85.5% |
| 4966023 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.63 | 45.0 | 5.08e-01 | 94.7% | 97.6% |
| 4293129 | 10.1.1.2 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB | 0.63 | 58.0 | 5.11e-01 | 100.0% | 91.6% |
| 3626905 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.63 | 57.0 | 5.66e-01 | 98.8% | 92.6% |
| 4127487 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.63 | 57.0 | 5.54e-01 | 98.8% | 89.2% |
| 5011055 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.63 | 58.0 | 5.64e-01 | 98.8% | 100.0% |
| 3249052 | 10.1.1.19 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_leg-like | 0.63 | 58.0 | 5.26e-01 | 100.0% | 99.1% |
| 5045890 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.63 | 48.0 | 5.22e-01 | 100.0% | 93.8% |
| 5029611 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.63 | 57.0 | 5.57e-01 | 98.8% | 100.0% |
| 1176686 | 10.32.1.77 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Reelin_subrepeat-B | 0.63 | 51.0 | 5.39e-01 | 95.9% | 98.0% |
| 4960904 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.62 | 40.0 | 4.86e-01 | 85.9% | 100.0% |
| 4468775 | 10.2.1.55 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › NPL | 0.62 | 37.0 | 4.62e-01 | 80.0% | 98.0% |
| 3474323 | 10.32.1.33 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CIA30 | 0.62 | 56.0 | 5.51e-01 | 97.1% | 99.4% |
| 4319886 | 10.32.1.33 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CIA30 | 0.62 | 56.0 | 5.41e-01 | 98.2% | 96.4% |
| 2886243 | 10.1.1.15 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_12 | 0.62 | 55.0 | 4.66e-01 | 96.5% | 87.1% |
| 3435000 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.62 | 53.0 | 5.38e-01 | 98.8% | 91.8% |
| 3727852 | 10.1.1.19 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_leg-like | 0.62 | 57.0 | 4.96e-01 | 100.0% | 92.5% |
| 1549432 | 11.1.1.14 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 | 0.61 | 41.0 | 4.88e-01 | 86.5% | 99.1% |
| 1681795 | 10.32.1.53 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GalBD_like | 0.61 | 55.0 | 5.14e-01 | 97.1% | 89.9% |
| 2414126 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.61 | 55.0 | 4.94e-01 | 100.0% | 71.0% |
| 3795887 | 10.32.1.216 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM | 0.60 | 56.0 | 4.82e-01 | 100.0% | 83.1% |
| 3336763 | 10.1.1.27 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Alginate_lyase2 | 0.60 | 55.0 | 5.29e-01 | 99.4% | 96.4% |
| 3927107 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.60 | 42.0 | 4.79e-01 | 87.1% | 97.6% |
| 1092 | 10.1.1.31 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF1961 | 0.60 | 55.0 | 5.01e-01 | 99.4% | 96.9% |
| 3322400 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.58 | 51.0 | 3.96e-01 | 99.4% | 43.9% |
| 3607773 | 10.1.1.56 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C | 0.57 | 51.0 | 4.60e-01 | 98.2% | 85.1% |
| 3382082 | 207.1.1.37 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › C-JID | 0.56 | 52.0 | 3.94e-01 | 100.0% | 45.5% |
| 4814721 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.56 | 48.0 | 4.57e-01 | 100.0% | 79.2% |
| 379700 | 10.2.1.8 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Polyhedrin | 0.55 | 48.0 | 4.44e-01 | 100.0% | 73.7% |
| 3708849 | 10.1.1.56 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C | 0.55 | 50.0 | 4.37e-01 | 98.2% | 75.3% |
| 1720475 | 10.2.1.25 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_SCP | 0.55 | 49.0 | 4.68e-01 | 100.0% | 82.7% |
| 3300921 | 207.1.1.190 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_13 | 0.55 | 47.0 | 3.38e-01 | 100.0% | 32.2% |
| 3198474 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.54 | 36.0 | 4.10e-01 | 86.5% | 88.5% |
| 3833446 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 37.0 | 2.46e-01 | 92.4% | 16.6% |
| 4406146 | 10.12.1.53 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 | 0.52 | 44.0 | 4.18e-01 | 90.6% | 78.8% |
D2
high
residues 572-666
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1uenA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 43.0 | 3.94e-01 | 100.0% | 54.4% |
| 2cuiA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 40.0 | 3.82e-01 | 100.0% | 60.7% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.54 | 38.0 | 3.86e-01 | 100.0% | 74.5% |
| 2moqA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 36.0 | 3.16e-01 | 100.0% | 44.6% |
| 2ux6A00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.53 | 31.0 | 2.86e-01 | 100.0% | 42.6% |
| 3u2sC00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 44.0 | 4.54e-01 | 90.5% | 95.6% |
| 1x9tA02 | 3.90.1620.10 | Alpha Beta › Alpha-Beta Complex › adenovirus 2 penton base, domain 2 › adenovirus 2 penton base, domain 2 | 0.52 | 44.0 | 3.25e-01 | 96.8% | 91.4% |
| 5u8rA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 39.0 | 3.77e-01 | 100.0% | 70.4% |
| 3bv8A00 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.51 | 34.0 | 3.64e-01 | 81.1% | 76.5% |
| 3gqcC04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.51 | 37.0 | 3.45e-01 | 75.8% | 100.0% |
| 2zyrA02 | 2.60.40.2190 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 35.0 | 3.52e-01 | 97.9% | 71.3% |
| 4je3B00 | 3.10.20.720 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.50 | 30.0 | 3.24e-01 | 93.7% | 70.1% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995671 | 3115.1.1.12 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › PF30567 | 0.76 | 40.0 | 5.28e-01 | 81.1% | 98.0% |
| 5010635 | 304.102.1.0 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase | 0.68 | 47.0 | 3.94e-01 | 78.9% | 43.0% |
| 3879431 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 45.0 | 4.42e-01 | 100.0% | 64.8% |
| 3732370 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.65 | 40.0 | 4.76e-01 | 80.0% | 96.7% |
| 3909339 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.63 | 43.0 | 4.24e-01 | 100.0% | 67.0% |
| 1521 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.62 | 43.0 | 3.94e-01 | 100.0% | 54.4% |
| 3398840 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.61 | 43.0 | 4.23e-01 | 100.0% | 66.7% |
| 3562570 | 306.10.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › H1 domain of KCTD12 › H1 domain of KCTD12 | 0.56 | 39.0 | 3.43e-01 | 89.5% | 48.6% |
| 3089705 | 807.1.1.1 ↗ | a+b two layers › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › CpcD | 0.55 | 38.0 | 4.07e-01 | 85.3% | 81.5% |
| 3696265 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 47.0 | 3.66e-01 | 94.7% | 58.6% |
| 3896560 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.54 | 38.0 | 3.19e-01 | 72.6% | 47.1% |
| 5069245 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 41.0 | 3.95e-01 | 100.0% | 70.0% |
| 4930528 | 11.1.1.1432 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26259 | 0.54 | 35.0 | 3.27e-01 | 98.9% | 51.7% |
| 3889090 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.53 | 46.0 | 4.25e-01 | 100.0% | 95.4% |
| 3223690 | 150.3.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine | 0.53 | 33.0 | 2.92e-01 | 87.4% | 40.7% |
| 4980545 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.52 | 38.0 | 3.81e-01 | 97.9% | 76.8% |
| 1813080 | 11.1.1.239 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG3 | 0.52 | 41.0 | 3.78e-01 | 100.0% | 65.9% |
| 3249488 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 40.0 | 3.89e-01 | 100.0% | 76.2% |
| 4029036 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.51 | 41.0 | 4.27e-01 | 97.9% | 95.6% |
| 3226640 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 33.0 | 3.26e-01 | 87.4% | 62.6% |
D3
medium
residues 500-545_692-778