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SR-VP_2-4_scaffold_141_1208361_prodigal-single.1__X__X__00259
Bact-VirSR-VP_2-4_scaffold_141_1208361_prodigal-single.1__X__X__00259
Identity
- Kingdom:
- phage
Quality
73.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-60
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jtkA00 | 2.10.80.10 | Mainly Beta › Ribbon › Lipase, subunit A › Lipase, subunit A | 0.66 | 40.0 | 3.50e-01 | 71.7% | 42.0% |
| 2da0A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.65 | 33.0 | 2.61e-01 | 91.7% | 25.4% |
| 3nynA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 33.0 | 2.47e-01 | 70.0% | 24.5% |
| 3thxB04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.50 | 41.0 | 3.26e-01 | 91.7% | 53.9% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2491376 | 387.1.3.3 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Colipase-like › Dickkopf_N | 0.69 | 37.0 | 4.60e-01 | 70.0% | 96.9% |
| 1159050 | 387.1.3.7 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Colipase-like › DIKK1-2-4_C-subdom1 | 0.66 | 40.0 | 4.76e-01 | 71.7% | 97.4% |
| 3932471 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.53 | 37.0 | 2.32e-01 | 100.0% | 13.2% |