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SR-VP_2-4_scaffold_141_1208361_prodigal-single.1__X__X__00324
Bact-VirSR-VP_2-4_scaffold_141_1208361_prodigal-single.1__X__X__00324
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-132
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_30711_prodigal-single.1__X__X__00446__D2-155
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1iuhA00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.68 | 57.0 | 5.06e-01 | 88.5% | 74.3% |
| 1vdxA00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.66 | 55.0 | 4.92e-01 | 89.3% | 71.2% |
| 1jh6A00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.63 | 52.0 | 4.66e-01 | 88.5% | 66.3% |
| 2vfkA00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.61 | 50.0 | 4.35e-01 | 88.5% | 68.8% |
| 2z4hA02 | 2.40.50.540 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NlpE, C-terminal domain | 0.53 | 31.0 | 3.62e-01 | 81.7% | 84.9% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4972305 | 264.1.1.7 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS | 0.68 | 58.0 | 5.15e-01 | 89.3% | 70.2% |
| 1869530 | 264.1.1.7 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS | 0.65 | 54.0 | 4.63e-01 | 89.3% | 66.8% |
| 4026533 | 264.1.1.7 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS | 0.64 | 53.0 | 4.60e-01 | 88.5% | 68.0% |
| 276 | 264.1.1.4 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › CPDase | 0.63 | 52.0 | 4.66e-01 | 88.5% | 66.3% |
| 3396124 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.60 | 29.0 | 3.33e-01 | 97.7% | 61.1% |
| 4020515 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 33.0 | 3.68e-01 | 81.7% | 77.0% |