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SR-VP_2-4_scaffold_141_1208361_prodigal-single.1__X__X__00356
Bact-VirSR-VP_2-4_scaffold_141_1208361_prodigal-single.1__X__X__00356
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-62
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ihjA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.63 | 53.0 | 3.91e-01 | 98.4% | 62.1% |
| 4xmqA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.62 | 44.0 | 3.40e-01 | 91.9% | 34.6% |
| 3dydA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.62 | 52.0 | 4.12e-01 | 96.8% | 70.1% |
| 2nlvA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.62 | 53.0 | 4.42e-01 | 98.4% | 67.0% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 42.0 | 4.24e-01 | 77.4% | 83.1% |
| 3hxlA05 | 3.30.360.90 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › | 0.60 | 48.0 | 4.73e-01 | 90.3% | 92.8% |
| 4p4mA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.60 | 47.0 | 3.92e-01 | 88.7% | 95.7% |
| 4cvqA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.60 | 49.0 | 3.72e-01 | 95.2% | 59.9% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 43.0 | 4.19e-01 | 77.4% | 84.1% |
| 3g7qA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.60 | 49.0 | 3.81e-01 | 96.8% | 63.5% |
| 2b39A03 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 49.0 | 3.95e-01 | 91.9% | 81.6% |
| 4q6rA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.59 | 51.0 | 4.07e-01 | 98.4% | 69.5% |
| 2nwvA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.59 | 48.0 | 4.10e-01 | 95.2% | 67.0% |
| 2x5fA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.59 | 50.0 | 4.33e-01 | 100.0% | 89.4% |
| 1js3A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.59 | 44.0 | 3.88e-01 | 83.9% | 86.6% |
| 1fg7A02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 49.0 | 3.97e-01 | 98.4% | 67.4% |
| 2vldA02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.58 | 43.0 | 3.67e-01 | 82.3% | 93.6% |
| 1xi9B01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 47.0 | 3.71e-01 | 95.2% | 64.6% |
| 1u7bA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.57 | 40.0 | 2.75e-01 | 75.8% | 37.5% |
| 7lt2A01 | 3.30.460.90 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.57 | 48.0 | 3.36e-01 | 100.0% | 77.6% |
| 7uhyA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 46.0 | 2.99e-01 | 91.9% | 35.5% |
| 4oevA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.56 | 42.0 | 3.22e-01 | 82.3% | 56.8% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 41.0 | 4.11e-01 | 77.4% | 92.1% |
| 3tc9A02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.56 | 44.0 | 2.86e-01 | 91.9% | 37.5% |
| 4wj7D00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 39.0 | 3.19e-01 | 74.2% | 80.5% |
| 2r41A00 | 3.10.450.150 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein | 0.56 | 44.0 | 3.74e-01 | 88.7% | 52.4% |
| 1plqA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.56 | 41.0 | 2.78e-01 | 80.6% | 38.8% |
| 1xocA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.55 | 42.0 | 3.21e-01 | 83.9% | 78.7% |
| 2x3lA01 | 3.90.1150.150 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.55 | 46.0 | 3.91e-01 | 93.5% | 80.0% |
| 3k1lA02 | 3.30.457.30 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › | 0.55 | 41.0 | 3.68e-01 | 82.3% | 70.0% |
| 1upsA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 39.0 | 3.18e-01 | 79.0% | 97.0% |
| 1v72A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 44.0 | 3.86e-01 | 93.5% | 81.2% |
| 1nnvA01 | 3.10.450.140 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › dsDNA mimic, putative | 0.54 | 43.0 | 3.76e-01 | 90.3% | 96.0% |
| 4b8eB00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.53 | 39.0 | 2.86e-01 | 82.3% | 40.1% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.53 | 36.0 | 3.47e-01 | 77.4% | 61.1% |
| 1k3sA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 39.0 | 3.39e-01 | 83.9% | 85.2% |
| 5xpyA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 35.0 | 3.04e-01 | 74.2% | 58.3% |
| 2efiA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 40.0 | 3.58e-01 | 93.5% | 63.0% |
| 6ptrB01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.50 | 39.0 | 3.31e-01 | 87.1% | 47.8% |
| 1sqwA01 | 3.10.450.220 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 38.0 | 3.41e-01 | 85.5% | 83.9% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5044272 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.70 | 44.0 | 4.87e-01 | 74.2% | 80.0% |
| 5052539 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.68 | 51.0 | 4.83e-01 | 83.9% | 68.0% |
| 3461069 | 375.1.1.44 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-NADH-PPase | 0.68 | 39.0 | 4.71e-01 | 71.0% | 100.0% |
| 3898522 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 49.0 | 5.29e-01 | 82.3% | 98.0% |
| 3649213 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.67 | 56.0 | 5.13e-01 | 95.2% | 100.0% |
| 5043685 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 47.0 | 4.53e-01 | 72.6% | 100.0% |
| 3882464 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 49.0 | 4.67e-01 | 82.3% | 66.7% |
| 5052777 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 52.0 | 5.01e-01 | 91.9% | 80.0% |
| 4344077 | 375.8.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta | 0.63 | 39.0 | 4.43e-01 | 74.2% | 97.5% |
| 3737835 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.62 | 48.0 | 4.17e-01 | 87.1% | 81.0% |
| 1152403 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.61 | 53.0 | 4.11e-01 | 100.0% | 92.9% |
| 3326402 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 45.0 | 4.34e-01 | 87.1% | 98.7% |
| 4991612 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 41.0 | 4.02e-01 | 74.2% | 82.9% |
| 3931129 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.59 | 44.0 | 2.87e-01 | 82.3% | 18.6% |
| 5025413 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.58 | 46.0 | 3.86e-01 | 91.9% | 77.5% |
| 4150621 | 321.1.1.3 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › ATP-gua_Ptrans | 0.58 | 48.0 | 3.18e-01 | 93.5% | 36.5% |
| 5005811 | 3414.1.1.0 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein | 0.58 | 47.0 | 4.44e-01 | 95.2% | 81.2% |
| 1687688 | 5.1.3.134 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR, BNR_2 | 0.58 | 44.0 | 2.67e-01 | 85.5% | 16.0% |
| 3785311 | 206.1.1.7 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase | 0.58 | 40.0 | 2.50e-01 | 75.8% | 22.0% |
| 4959983 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 39.0 | 4.08e-01 | 75.8% | 80.0% |
| 3516232 | 220.1.1.5 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PID | 0.57 | 39.0 | 2.98e-01 | 74.2% | 59.4% |
| 3481670 | 4205.1.1.3 ↗ | a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › SMI1_KNR4 | 0.56 | 42.0 | 3.06e-01 | 83.9% | 84.5% |
| 4870150 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.56 | 40.0 | 3.26e-01 | 79.0% | 70.1% |
| 3378783 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 42.0 | 4.10e-01 | 82.3% | 100.0% |
| 3980114 | 3860.1.1.158 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › ThrE | 0.55 | 43.0 | 3.32e-01 | 87.1% | 84.0% |
| 3515384 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.55 | 45.0 | 3.43e-01 | 90.3% | 62.0% |
| 5005227 | 325.1.5.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal protein L10e | 0.55 | 45.0 | 3.59e-01 | 93.5% | 79.3% |
| 3455670 | 3887.2.1.1 ↗ | a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung | 0.55 | 43.0 | 3.80e-01 | 91.9% | 87.0% |
| 3199325 | 241.1.1.11 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Med14 | 0.55 | 45.0 | 3.36e-01 | 96.8% | 48.3% |
| None | — | 0.55 | 43.0 | 2.77e-01 | 90.3% | 32.4% | |
| 3907154 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 42.0 | 3.49e-01 | 88.7% | 45.6% |
| 3894449 | 331.10.2.4 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › DEPDC5_CTD | 0.54 | 40.0 | 3.48e-01 | 82.3% | 52.4% |
| None | — | 0.54 | 42.0 | 2.72e-01 | 90.3% | 32.0% | |
| 3996280 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.54 | 41.0 | 3.53e-01 | 87.1% | 54.5% |
| 4965523 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 37.0 | 3.90e-01 | 77.4% | 85.5% |
| 3829476 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.53 | 39.0 | 2.92e-01 | 80.6% | 34.3% |
| 3457163 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.52 | 40.0 | 3.76e-01 | 85.5% | 75.0% |
D2
medium
residues 63-143
Domain cluster:
representative
CATH (50)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gxfA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.73 | 47.0 | 4.16e-01 | 98.8% | 44.9% |
| 4hz9B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.71 | 44.0 | 3.85e-01 | 98.8% | 41.5% |
| 3fh1A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.70 | 43.0 | 3.77e-01 | 98.8% | 41.0% |
| 2w20B01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.67 | 58.0 | 3.69e-01 | 95.1% | 32.4% |
| 3al9A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.65 | 58.0 | 3.59e-01 | 98.8% | 53.2% |
| 3n8bA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 50.0 | 5.22e-01 | 97.5% | 88.0% |
| 3akhA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.65 | 55.0 | 3.75e-01 | 95.1% | 94.8% |
| 3bgaA05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.64 | 44.0 | 3.00e-01 | 70.4% | 73.3% |
| 1vkdA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.64 | 53.0 | 3.55e-01 | 92.6% | 42.0% |
| 4bboA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.64 | 45.0 | 4.04e-01 | 100.0% | 53.1% |
| 4mlgG00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.63 | 54.0 | 3.62e-01 | 95.1% | 34.3% |
| 3mnmA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.63 | 51.0 | 4.56e-01 | 87.7% | 94.6% |
| 2imjD01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 51.0 | 4.26e-01 | 90.1% | 59.2% |
| 6z9cA01 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.62 | 49.0 | 4.33e-01 | 87.7% | 95.1% |
| 1h91A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 44.0 | 3.38e-01 | 74.1% | 73.3% |
| 1l7aA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.61 | 42.0 | 2.88e-01 | 72.8% | 26.4% |
| 4h5bA00 | 3.30.1460.70 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.60 | 52.0 | 4.24e-01 | 95.1% | 78.9% |
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.60 | 52.0 | 4.28e-01 | 97.5% | 66.2% |
| 7vd7A01 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.60 | 41.0 | 4.00e-01 | 75.3% | 63.0% |
| 2a15A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 40.0 | 3.49e-01 | 70.4% | 48.9% |
| 4ca1B02 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.59 | 48.0 | 4.08e-01 | 88.9% | 81.1% |
| 1p32B00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.58 | 51.0 | 3.95e-01 | 95.1% | 57.9% |
| 1swgC00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.58 | 47.0 | 4.16e-01 | 92.6% | 92.9% |
| 7dd9A02 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.58 | 50.0 | 3.55e-01 | 97.5% | 82.5% |
| 3lydA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.57 | 47.0 | 3.90e-01 | 93.8% | 50.7% |
| 1tlyA00 | 2.40.230.20 | Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Nucleoside-specific channel-forming protein, Tsx-like | 0.57 | 50.0 | 3.57e-01 | 97.5% | 51.8% |
| 4bj8K00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.57 | 43.0 | 3.75e-01 | 100.0% | 54.2% |
| 3er7B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 41.0 | 3.63e-01 | 100.0% | 51.2% |
| 6eotD01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.56 | 48.0 | 3.00e-01 | 100.0% | 18.4% |
| 3pgbA01 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.56 | 49.0 | 3.03e-01 | 100.0% | 61.7% |
| 5da9A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 48.0 | 3.14e-01 | 93.8% | 24.8% |
| 4esqA00 | 3.40.1000.70 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain | 0.56 | 43.0 | 3.23e-01 | 96.3% | 34.0% |
| 3vsmA02 | 2.70.98.100 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Baculovirus E66 occlusion-derived virus envelope protein, domain 2 | 0.56 | 38.0 | 2.92e-01 | 70.4% | 71.9% |
| 1a7tA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.55 | 48.0 | 3.51e-01 | 97.5% | 94.3% |
| 3otlA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 48.0 | 3.87e-01 | 95.1% | 55.6% |
| 3pg4A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.54 | 47.0 | 3.39e-01 | 96.3% | 93.5% |
| 3h4zB03 | 3.15.10.50 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › | 0.54 | 50.0 | 3.67e-01 | 98.8% | 59.7% |
| 3w7tA01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.54 | 44.0 | 3.28e-01 | 93.8% | 93.5% |
| 1wuoA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.53 | 47.0 | 3.49e-01 | 100.0% | 94.5% |
| 3g8yA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 47.0 | 3.03e-01 | 98.8% | 25.6% |
| 1txkA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.53 | 45.0 | 3.01e-01 | 98.8% | 53.4% |
| 3rd6A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 47.0 | 3.86e-01 | 96.3% | 59.0% |
| 2vf9A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.52 | 46.0 | 3.90e-01 | 97.5% | 63.4% |
| 1jmxA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.52 | 43.0 | 4.00e-01 | 97.5% | 83.5% |
| 1nbwA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 45.0 | 3.86e-01 | 100.0% | 85.6% |
| 1f49A05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.51 | 47.0 | 3.16e-01 | 100.0% | 67.6% |
| 1a0sP00 | 2.40.170.10 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type | 0.51 | 43.0 | 2.83e-01 | 98.8% | 34.4% |
| 1nqnA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.51 | 44.0 | 3.90e-01 | 97.5% | 89.0% |
| 3fbqA01 | 2.60.40.1630 | Mainly Beta › Sandwich › Immunoglobulin-like › bacillus anthracis domain | 0.50 | 39.0 | 3.37e-01 | 88.9% | 79.2% |
| 3fcyA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 44.0 | 2.97e-01 | 100.0% | 45.7% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4292366 | 9.1.1.14 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS | 0.76 | 52.0 | 3.92e-01 | 70.4% | 94.0% |
| 4114942 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.73 | 53.0 | 4.06e-01 | 76.5% | 77.7% |
| 3286246 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.71 | 54.0 | 4.92e-01 | 79.0% | 82.7% |
| 3987311 | 7579.1.1.27 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › AXE1 | 0.71 | 49.0 | 3.27e-01 | 71.6% | 26.3% |
| 3890539 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.70 | 48.0 | 5.49e-01 | 76.5% | 96.7% |
| 3936017 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.69 | 58.0 | 5.14e-01 | 88.9% | 82.7% |
| 5039153 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.69 | 58.0 | 3.74e-01 | 95.1% | 33.5% |
| 3250629 | 4210.1.1.1 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › WGR | 0.67 | 54.0 | 4.97e-01 | 86.4% | 75.2% |
| 146266 | 295.1.1.8 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3276 | 0.66 | 51.0 | 5.05e-01 | 97.5% | 78.6% |
| 2717534 | 12.3.1.31 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YgjK_N | 0.66 | 45.0 | 3.02e-01 | 70.4% | 71.1% |
| 3568177 | 11.10.1.8 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › BTBD16_C | 0.65 | 54.0 | 4.44e-01 | 88.9% | 80.7% |
| 3762480 | 11.1.5.83 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › BTBD16_C | 0.64 | 53.0 | 4.49e-01 | 88.9% | 86.9% |
| 4827586 | 2003.1.5.151 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 | 0.64 | 46.0 | 3.28e-01 | 75.3% | 37.4% |
| 4944765 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 49.0 | 3.03e-01 | 82.7% | 70.2% |
| 3352266 | 9.2.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › FBO_C | 0.63 | 56.0 | 4.27e-01 | 98.8% | 43.4% |
| 143323 | 7579.1.1.27 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › AXE1 | 0.63 | 43.0 | 2.88e-01 | 70.4% | 26.8% |
| 3698492 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.63 | 50.0 | 4.28e-01 | 98.8% | 54.4% |
| 3633770 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.63 | 55.0 | 3.47e-01 | 100.0% | 43.7% |
| 5051418 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.62 | 52.0 | 4.40e-01 | 91.4% | 78.5% |
| 4152335 | 9.2.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Avidin | 0.62 | 48.0 | 4.10e-01 | 100.0% | 53.2% |
| 3663455 | 5.1.3.68 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 | 0.62 | 53.0 | 3.68e-01 | 97.5% | 38.6% |
| 4944259 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.61 | 54.0 | 3.88e-01 | 97.5% | 50.6% |
| 3818651 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.60 | 49.0 | 3.50e-01 | 91.4% | 69.8% |
| 3318685 | 284.1.3.2 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C | 0.60 | 51.0 | 4.65e-01 | 92.6% | 72.4% |
| 4995046 | 12.3.1.15 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › AmyA-gluTrfs_C | 0.59 | 52.0 | 3.57e-01 | 98.8% | 78.8% |
| 3819740 | 284.1.3.4 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK | 0.59 | 50.0 | 4.84e-01 | 92.6% | 84.4% |
| 5044412 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.59 | 51.0 | 3.67e-01 | 97.5% | 49.0% |
| 4944680 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 49.0 | 2.88e-01 | 90.1% | 18.9% |
| 3802306 | 284.1.2.0 ↗ | a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases | 0.59 | 50.0 | 4.75e-01 | 92.6% | 80.0% |
| 4299499 | 12.3.1.24 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas | 0.59 | 52.0 | 3.73e-01 | 100.0% | 87.1% |
| 3427022 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.59 | 39.0 | 3.66e-01 | 98.8% | 55.0% |
| 3185599 | 12.3.1.36 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF5127 | 0.58 | 45.0 | 2.88e-01 | 82.7% | 67.2% |
| 386453 | 881.1.1.6 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Lpp-LpqN | 0.58 | 47.0 | 3.77e-01 | 93.8% | 45.0% |
| 4304485 | 331.3.1.21 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › LigXa_C | 0.57 | 48.0 | 3.31e-01 | 92.6% | 76.8% |
| 3295575 | 284.1.3.2 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C | 0.57 | 47.0 | 4.43e-01 | 91.4% | 75.0% |
| 3456597 | 897.1.1.1 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 | 0.57 | 50.0 | 3.90e-01 | 95.1% | 57.7% |
| 4298119 | 12.3.1.6 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N | 0.57 | 49.0 | 3.37e-01 | 97.5% | 38.0% |
| 3959649 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.56 | 48.0 | 3.70e-01 | 95.1% | 68.4% |
| 4084359 | 12.3.1.2 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Cu_amine_oxid | 0.56 | 48.0 | 3.08e-01 | 100.0% | 67.6% |
| 3437773 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.55 | 47.0 | 4.22e-01 | 96.3% | 67.0% |
| 4929824 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.55 | 50.0 | 4.09e-01 | 100.0% | 63.4% |
| 3256516 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.55 | 47.0 | 3.20e-01 | 96.3% | 56.7% |
| 3933565 | 5.1.4.229 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_EMC1_N | 0.54 | 43.0 | 2.80e-01 | 92.6% | 18.9% |
| 3971381 | 206.1.1.17 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Kdo | 0.54 | 46.0 | 3.37e-01 | 96.3% | 69.9% |
| 4793345 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.54 | 43.0 | 3.90e-01 | 98.8% | 65.4% |
| 5000011 | 205.1.1.16 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 | 0.53 | 45.0 | 4.10e-01 | 93.8% | 92.7% |
| 4556083 | 9.2.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Avidin | 0.52 | 41.0 | 3.53e-01 | 98.8% | 53.1% |
| 3732444 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.52 | 41.0 | 3.43e-01 | 100.0% | 49.0% |
| 4500806 | 12.3.1.6 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N | 0.51 | 46.0 | 3.09e-01 | 98.8% | 65.0% |
| 3287191 | 243.1.1.71 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF8176 | 0.51 | 44.0 | 3.89e-01 | 96.3% | 100.0% |