SR-VP_2-4_scaffold_141_1208361_prodigal-single.1XX__00401

Bact-Vir

SR-VP_2-4_scaffold_141_1208361_prodigal-single.1__X__X__00401

Identity

84.6 mean pLDDT

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-143

PDB

Domain cluster: rep: SR-VP_2-4_scaffold_141_1208361_prodigal-single.1__X__X__00593__D3-104

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1i39A02	1.10.10.460	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribonuclease hii. Domain 2	0.60	16.0	2.96e-01	100.0%	73.3%
3dd7C00	1.20.120.1870	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Fic/DOC protein, Fido domain	0.58	26.0	2.82e-01	99.3%	45.9%
3gw6A02	1.20.5.1240	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Endo-n-acetylneuraminidase	0.52	22.0	3.24e-01	73.8%	100.0%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4995825	101.1.17.0 ↗	alpha arrays › HTH › HTH › FF domain	0.51	27.0	3.43e-01	100.0%	95.7%
3414623	101.1.2.566 ↗	alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C	0.51	29.0	2.29e-01	100.0%	27.1%
3738891	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.50	29.0	3.62e-01	94.3%	94.1%

D2 high residues 169-280

PDB

Domain cluster: representative

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3vm9A02	6.10.140.2110	Special › Helix non-globular › Helix Hairpins ›	0.65	29.0	3.90e-01	100.0%	80.7%
2ktmA00	1.10.790.10	Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain	0.60	33.0	4.06e-01	100.0%	86.8%
3f2bA05	6.10.50.10	Special › Helix non-globular › Insulin-like, subunit E ›	0.59	26.0	3.58e-01	99.1%	87.5%
3k6qA02	3.30.160.620	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain ›	0.57	38.0	4.25e-01	100.0%	86.5%
4e12A01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.56	34.0	2.87e-01	96.4%	35.8%
2d9wA01	2.30.29.30	Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	0.53	33.0	3.42e-01	70.5%	62.7%
1zarA03	1.10.510.10	Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1	0.53	38.0	4.04e-01	92.0%	84.5%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3512559	192.1.1.37 ↗	alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › DUF7753	0.71	35.0	4.66e-01	98.2%	84.6%
4579131	140.1.1.11 ↗	alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1	0.60	35.0	2.76e-01	83.0%	28.4%
3867207	4.8.1.10 ↗	beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like	0.57	42.0	4.50e-01	83.9%	91.6%
3971108	2484.1.1.0 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like	0.56	33.0	3.61e-01	100.0%	70.0%
3283724	330.10.1.0 ↗	a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain	0.56	27.0	2.99e-01	83.9%	56.8%
5001074	2484.1.1.59 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA	0.52	45.0	3.18e-01	97.3%	83.2%