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SR-VP_2-4_scaffold_141_1208361_prodigal-single.1__X__X__00462
Bact-VirSR-VP_2-4_scaffold_141_1208361_prodigal-single.1__X__X__00462
Identity
- Kingdom:
- phage
Quality
66.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 37-93
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ci0J01 | 3.10.610.10 | Alpha Beta › Roll › Pili subunits › GSPII I/J protein-like | 0.54 | 36.0 | 3.01e-01 | 70.2% | 76.9% |
| 7wa9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 36.0 | 2.72e-01 | 70.2% | 40.4% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5008603 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.57 | 36.0 | 2.55e-01 | 75.4% | 18.4% |
| 3193266 | 227.1.1.11 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 | 0.57 | 38.0 | 2.93e-01 | 70.2% | 49.7% |
| 3591346 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 45.0 | 2.77e-01 | 100.0% | 57.6% |
| 4947640 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.54 | 35.0 | 2.30e-01 | 100.0% | 14.5% |
| 3262164 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.54 | 35.0 | 2.31e-01 | 100.0% | 14.6% |
| 3238782 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.54 | 36.0 | 2.62e-01 | 71.9% | 88.4% |
| 3377087 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 41.0 | 2.63e-01 | 93.0% | 82.2% |
| 4999755 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 35.0 | 2.73e-01 | 75.4% | 27.1% |
| 3195503 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.52 | 44.0 | 2.61e-01 | 96.5% | 53.6% |
| 3697960 | 11.8.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like | 0.52 | 36.0 | 2.78e-01 | 73.7% | 29.3% |
| 3722420 | 2008.1.1.143 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF7924 | 0.51 | 36.0 | 2.71e-01 | 77.2% | 40.0% |
| 3706175 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.51 | 36.0 | 2.86e-01 | 75.4% | 97.5% |
| 3716707 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 37.0 | 2.68e-01 | 80.7% | 50.6% |
| 3833240 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.51 | 34.0 | 3.08e-01 | 73.7% | 73.1% |
| 4056691 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.51 | 43.0 | 3.46e-01 | 100.0% | 90.8% |