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SR-VP_2-4_scaffold_141_1208361_prodigal-single.1__X__X__00588
Bact-VirSR-VP_2-4_scaffold_141_1208361_prodigal-single.1__X__X__00588
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-158
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02627.26 best | CMD | 29.3 | 9.40e-07 | 44.3% | 76.2% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gu9C00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.86 | 62.0 | 6.10e-01 | 73.4% | 86.9% |
| 2gmyD00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.86 | 65.0 | 6.77e-01 | 77.2% | 84.1% |
| 2prrA02 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.85 | 65.0 | 7.21e-01 | 79.1% | 96.9% |
| 2oyoA02 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.85 | 65.0 | 7.27e-01 | 81.6% | 99.2% |
| 3lvyE01 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.85 | 64.0 | 6.35e-01 | 78.5% | 74.5% |
| 2vkjA00 | 1.20.58.2030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 26.0 | 3.22e-01 | 77.2% | 77.4% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3278427 | 608.1.1.0 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like | 0.90 | 75.0 | 7.02e-01 | 85.4% | 73.5% |
| 3279371 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.90 | 67.0 | 6.99e-01 | 75.9% | 85.5% |
| 3942592 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.88 | 64.0 | 6.87e-01 | 74.7% | 85.5% |
| 5040056 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.87 | 67.0 | 6.36e-01 | 78.5% | 68.9% |
| 3945481 | 608.1.1.0 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like | 0.87 | 58.0 | 5.95e-01 | 75.9% | 69.7% |
| 4676175 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.86 | 65.0 | 6.87e-01 | 76.6% | 86.4% |
| 2492347 | 608.1.1.0 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like | 0.86 | 67.0 | 6.30e-01 | 80.4% | 67.9% |
| 4272840 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.86 | 64.0 | 6.00e-01 | 75.9% | 82.7% |
| 3233 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.86 | 68.0 | 6.32e-01 | 82.3% | 67.9% |
| 3231 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.85 | 65.0 | 6.78e-01 | 78.5% | 84.4% |
| 3232 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.85 | 67.0 | 6.32e-01 | 84.2% | 69.4% |
| 3969303 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.83 | 64.0 | 6.14e-01 | 81.6% | 70.0% |
| 3956659 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.83 | 65.0 | 6.18e-01 | 80.4% | 71.1% |
| 4975143 | 608.1.1.0 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like | 0.73 | 51.0 | 5.52e-01 | 82.9% | 83.0% |
| 4494285 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.60 | 43.0 | 4.82e-01 | 82.3% | 94.4% |
| 3888840 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.58 | 41.0 | 3.25e-01 | 72.2% | 61.6% |
| 3785501 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 37.0 | 2.57e-01 | 73.4% | 33.4% |
| None | — | 0.51 | 41.0 | 3.27e-01 | 84.8% | 51.9% |