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SR-VP_2-4_scaffold_141_1208361_prodigal-single.1__X__X__00692
Bact-VirSR-VP_2-4_scaffold_141_1208361_prodigal-single.1__X__X__00692
Identity
- Kingdom:
- phage
Quality
47.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 75-150
Domain cluster:
rep: S27_BME27_1069154_prodigal-single.1__X__X__00296__D1058-1126
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6kqsA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.78 | 65.0 | 3.96e-01 | 100.0% | 15.8% |
| 1s4nB00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.70 | 51.0 | 3.31e-01 | 100.0% | 17.6% |
| 4oj5C04 | 2.160.20.130 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.67 | 60.0 | 4.48e-01 | 100.0% | 47.0% |
| 4fixA01 | 3.90.550.60 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › | 0.67 | 50.0 | 3.18e-01 | 100.0% | 15.4% |
| 4zyaB00 | 3.30.1910.20 | Alpha Beta › 2-Layer Sandwich › so0334 like fold › asparaginyl-tRNA synthetase, N-terminal domain | 0.66 | 54.0 | 5.44e-01 | 86.8% | 89.5% |
| 1xhbA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.66 | 49.0 | 3.48e-01 | 100.0% | 25.3% |
| 3qg5C02 | 3.30.160.210 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › DNA double-strand break repair nuclease | 0.65 | 43.0 | 4.47e-01 | 100.0% | 73.2% |
| 2yk4A01 | 3.30.370.20 | Alpha Beta › 2-Layer Sandwich › Barnase; Chain D › | 0.65 | 44.0 | 4.34e-01 | 100.0% | 65.9% |
| 5hexA01 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.63 | 55.0 | 3.82e-01 | 100.0% | 79.4% |
| 6jtdA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.62 | 46.0 | 3.22e-01 | 100.0% | 22.9% |
| 3pwzA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 40.0 | 3.48e-01 | 100.0% | 41.8% |
| 3hrgA02 | 3.30.420.260 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain | 0.61 | 54.0 | 4.76e-01 | 100.0% | 71.9% |
| 3f8dA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 41.0 | 3.54e-01 | 100.0% | 43.1% |
| 2b8tA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 52.0 | 4.34e-01 | 100.0% | 56.8% |
| 1y44A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.60 | 47.0 | 3.30e-01 | 88.2% | 40.7% |
| 1yt8A01 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.59 | 50.0 | 4.68e-01 | 100.0% | 74.2% |
| 4a8jB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 52.0 | 3.73e-01 | 100.0% | 33.6% |
| 1ii7B02 | 3.30.110.80 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › DNA double-strand break repair nuclease | 0.59 | 49.0 | 4.81e-01 | 100.0% | 88.0% |
| 1yt8A03 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.59 | 47.0 | 4.52e-01 | 100.0% | 75.8% |
| 5ddtA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.57 | 49.0 | 3.50e-01 | 100.0% | 31.5% |
| 1jhdA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.57 | 46.0 | 3.41e-01 | 100.0% | 33.5% |
| 3mw8A02 | 3.40.50.10090 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 49.0 | 4.29e-01 | 100.0% | 79.0% |
| 3fojA00 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.56 | 45.0 | 4.18e-01 | 100.0% | 69.7% |
| 5ve3A02 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.55 | 45.0 | 4.06e-01 | 100.0% | 64.3% |
| 2zgyA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 47.0 | 3.66e-01 | 100.0% | 80.0% |
| 1ks9A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 48.0 | 3.73e-01 | 100.0% | 68.9% |
| 5aj3K00 | 3.30.420.80 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 | 0.53 | 45.0 | 3.86e-01 | 100.0% | 68.4% |
| 5dp2A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 45.0 | 3.81e-01 | 100.0% | 67.4% |
| 1yirA00 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.53 | 46.0 | 2.97e-01 | 100.0% | 24.9% |
| 1wiwA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.53 | 45.0 | 3.86e-01 | 100.0% | 60.2% |
| 1mgpA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 44.0 | 3.65e-01 | 100.0% | 73.5% |
| 3r3uA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 45.0 | 3.08e-01 | 100.0% | 32.6% |
| 3bzbB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 44.0 | 3.38e-01 | 100.0% | 55.0% |
| 1gu7A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 43.0 | 3.39e-01 | 100.0% | 79.6% |
| 2g25A03 | 3.40.50.920 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 44.0 | 3.42e-01 | 100.0% | 66.7% |
| 4eexA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 42.0 | 3.60e-01 | 100.0% | 68.6% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4969480 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.81 | 61.0 | 4.02e-01 | 100.0% | 21.1% |
| 4970380 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.81 | 61.0 | 3.91e-01 | 100.0% | 18.8% |
| 3263728 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.81 | 68.0 | 4.72e-01 | 100.0% | 29.4% |
| 2831960 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.80 | 67.0 | 3.93e-01 | 100.0% | 11.9% |
| 4211588 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.80 | 66.0 | 3.95e-01 | 100.0% | 14.4% |
| 3272834 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.79 | 61.0 | 3.54e-01 | 100.0% | 9.9% |
| 3261015 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.78 | 67.0 | 3.99e-01 | 100.0% | 13.5% |
| 2831959 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.77 | 67.0 | 3.91e-01 | 100.0% | 11.9% |
| 3250810 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.77 | 66.0 | 4.52e-01 | 100.0% | 27.9% |
| 2464818 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.76 | 69.0 | 6.44e-01 | 100.0% | 85.9% |
| 3266430 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.72 | 64.0 | 3.94e-01 | 100.0% | 18.2% |
| 3173000 | 7516.1.1.9 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_15 | 0.71 | 53.0 | 3.34e-01 | 100.0% | 15.6% |
| 3251145 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.71 | 64.0 | 3.95e-01 | 100.0% | 17.7% |
| 3517947 | 1089.1.1.1 ↗ | a+b two layers › Asparaginal-tRNA synthetase N-terminal domain › Asparaginal-tRNA synthetase N-terminal domain › Asparaginal-tRNA synthetase N-terminal domain › AsnRS_N | 0.69 | 55.0 | 5.35e-01 | 85.5% | 80.0% |
| 1563527 | 3979.1.1.4 ↗ | a+b four layers › Mre11 nuclease C-terminal domain › Mre11 nuclease C-terminal domain › Mre11 nuclease C-terminal domain › Mre11_2nd | 0.68 | 47.0 | 5.07e-01 | 100.0% | 90.3% |
| 1285029 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.67 | 60.0 | 3.52e-01 | 100.0% | 14.5% |
| 3484831 | 1089.1.1.1 ↗ | a+b two layers › Asparaginal-tRNA synthetase N-terminal domain › Asparaginal-tRNA synthetase N-terminal domain › Asparaginal-tRNA synthetase N-terminal domain › AsnRS_N | 0.66 | 54.0 | 5.45e-01 | 85.5% | 89.3% |
| 3671730 | 7516.1.1.16 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_43 | 0.66 | 47.0 | 3.20e-01 | 100.0% | 20.4% |
| 4941784 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.66 | 51.0 | 4.22e-01 | 100.0% | 47.4% |
| 4459913 | 2007.1.19.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › SAT | 0.65 | 58.0 | 3.88e-01 | 100.0% | 94.2% |
| 4053783 | 247.1.1.33 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B, Lactamase_B_2, Anti-Pycsar_Apyc1 | 0.64 | 49.0 | 3.29e-01 | 100.0% | 21.4% |
| 3761168 | 1089.1.1.1 ↗ | a+b two layers › Asparaginal-tRNA synthetase N-terminal domain › Asparaginal-tRNA synthetase N-terminal domain › Asparaginal-tRNA synthetase N-terminal domain › AsnRS_N | 0.64 | 51.0 | 4.64e-01 | 84.2% | 67.0% |
| 5054288 | 247.1.1.30 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Anti-Pycsar_Apyc1 | 0.64 | 48.0 | 3.21e-01 | 100.0% | 20.0% |
| 3896831 | 1089.1.1.0 ↗ | a+b two layers › Asparaginal-tRNA synthetase N-terminal domain › Asparaginal-tRNA synthetase N-terminal domain › Asparaginal-tRNA synthetase N-terminal domain | 0.63 | 51.0 | 3.61e-01 | 85.5% | 31.2% |
| None | — | 0.63 | 48.0 | 3.17e-01 | 100.0% | 20.0% | |
| 3939653 | 1089.1.1.1 ↗ | a+b two layers › Asparaginal-tRNA synthetase N-terminal domain › Asparaginal-tRNA synthetase N-terminal domain › Asparaginal-tRNA synthetase N-terminal domain › AsnRS_N | 0.62 | 49.0 | 4.98e-01 | 84.2% | 88.0% |
| 3175624 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.61 | 48.0 | 3.51e-01 | 100.0% | 29.1% |
| 4627871 | 247.1.1.35 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2, Lactamase_B_4, Anti-Pycsar_Apyc1 | 0.61 | 50.0 | 3.32e-01 | 89.5% | 36.4% |
| 4930722 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.61 | 49.0 | 3.47e-01 | 89.5% | 42.9% |
| 3928154 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.60 | 51.0 | 3.73e-01 | 100.0% | 59.1% |
| None | — | 0.60 | 49.0 | 3.23e-01 | 89.5% | 34.6% | |
| 4024248 | 2008.3.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Eukaryotic RPB5 N-terminal domain › Eukaryotic RPB5 N-terminal domain › RNA_pol_Rpb5_N | 0.60 | 45.0 | 3.93e-01 | 84.2% | 63.2% |
| 4229347 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.59 | 53.0 | 4.69e-01 | 100.0% | 82.7% |
| 4508616 | 247.1.1.29 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2, Anti-Pycsar_Apyc1 | 0.59 | 48.0 | 3.20e-01 | 89.5% | 35.7% |
| 4258093 | 247.1.1.33 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B, Lactamase_B_2, Anti-Pycsar_Apyc1 | 0.59 | 48.0 | 3.21e-01 | 89.5% | 36.4% |
| 4218750 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.59 | 47.0 | 3.19e-01 | 89.5% | 36.5% |
| 5026554 | 247.1.1.30 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Anti-Pycsar_Apyc1 | 0.59 | 46.0 | 3.11e-01 | 88.2% | 32.6% |
| 4307646 | 247.1.1.33 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B, Lactamase_B_2, Anti-Pycsar_Apyc1 | 0.57 | 46.0 | 3.13e-01 | 89.5% | 34.8% |
| 3591357 | 2003.1.1.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Slo-like_RCK | 0.57 | 51.0 | 3.76e-01 | 100.0% | 38.5% |
| 5021827 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 51.0 | 3.67e-01 | 100.0% | 34.5% |
| 3672771 | 2004.1.1.56 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC | 0.56 | 48.0 | 3.15e-01 | 100.0% | 22.2% |
| 5052011 | 2007.2.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins | 0.56 | 48.0 | 3.91e-01 | 100.0% | 56.8% |
| 3454559 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.56 | 49.0 | 4.24e-01 | 100.0% | 79.2% |
| 4941175 | 3979.1.1.0 ↗ | a+b four layers › Mre11 nuclease C-terminal domain › Mre11 nuclease C-terminal domain › Mre11 nuclease C-terminal domain | 0.55 | 45.0 | 4.60e-01 | 100.0% | 97.3% |
| 4230235 | 2007.1.8.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Uroporphyrinogen III synthase (U3S, HemD) › HEM4 | 0.55 | 48.0 | 4.17e-01 | 100.0% | 85.8% |
| 3207633 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.55 | 47.0 | 3.20e-01 | 100.0% | 69.8% |
| 3744040 | 2007.2.5.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese | 0.55 | 48.0 | 3.94e-01 | 100.0% | 68.5% |
| 4068562 | 247.1.1.29 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2, Anti-Pycsar_Apyc1 | 0.54 | 43.0 | 2.97e-01 | 89.5% | 36.6% |
| 169095 | 2007.2.1.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_4 | 0.54 | 45.0 | 3.74e-01 | 100.0% | 90.7% |
| 3508348 | 2007.2.5.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese | 0.54 | 46.0 | 3.99e-01 | 100.0% | 69.6% |
| 4986412 | 7550.1.1.1 ↗ | a/b three-layered sandwiches › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › TP_methylase | 0.53 | 45.0 | 3.85e-01 | 100.0% | 77.0% |
| 4994001 | 2007.1.8.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Uroporphyrinogen III synthase (U3S, HemD) › HEM4 | 0.53 | 46.0 | 3.91e-01 | 100.0% | 81.5% |
| 2877581 | 2484.1.1.95 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase-T7_RNaseH-like | 0.53 | 45.0 | 3.21e-01 | 100.0% | 33.1% |
| 3224308 | 2484.1.1.39 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Fumble | 0.52 | 44.0 | 3.81e-01 | 100.0% | 75.4% |
| 3936700 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.51 | 41.0 | 3.31e-01 | 100.0% | 88.4% |
D2
high
residues 156-248
Domain cluster:
rep: SR-VP_2-4_scaffold_141_2548329_prodigal-single.1__X__X__00138__D61-144
CATH (52)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6tdyD01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.75 | 57.0 | 6.22e-01 | 95.7% | 98.7% |
| 7nkdA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.75 | 46.0 | 4.98e-01 | 100.0% | 74.0% |
| 4hn7A00 | 2.40.50.650 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.72 | 39.0 | 4.12e-01 | 96.8% | 58.8% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.72 | 56.0 | 6.08e-01 | 96.8% | 97.5% |
| 3dclA02 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.70 | 60.0 | 6.10e-01 | 100.0% | 94.5% |
| 4ac9C04 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.69 | 53.0 | 5.66e-01 | 100.0% | 95.0% |
| 1r5bA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.69 | 59.0 | 6.07e-01 | 98.9% | 95.5% |
| 2lp6A00 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.67 | 58.0 | 5.95e-01 | 100.0% | 96.7% |
| 2m5sA00 | 2.40.30.240 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.67 | 61.0 | 5.51e-01 | 100.0% | 99.2% |
| 3op1A02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.66 | 53.0 | 5.03e-01 | 96.8% | 73.9% |
| 4g6iB01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.65 | 56.0 | 5.79e-01 | 100.0% | 98.9% |
| 3p26B02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.65 | 60.0 | 5.81e-01 | 100.0% | 93.1% |
| 3h0gH00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 38.0 | 3.48e-01 | 100.0% | 44.4% |
| 2crvA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.64 | 58.0 | 5.81e-01 | 100.0% | 100.0% |
| 2yweA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.64 | 56.0 | 5.54e-01 | 98.9% | 90.0% |
| 4x8iA02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.63 | 53.0 | 5.55e-01 | 95.7% | 100.0% |
| 2lssA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 37.0 | 4.12e-01 | 100.0% | 75.7% |
| 2dy3D01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.63 | 55.0 | 5.05e-01 | 100.0% | 73.2% |
| 4tkoB01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.63 | 55.0 | 5.54e-01 | 100.0% | 97.8% |
| 1kzlA02 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.63 | 51.0 | 5.02e-01 | 100.0% | 82.2% |
| 4zciA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 55.0 | 5.41e-01 | 98.9% | 89.1% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 32.0 | 4.02e-01 | 94.6% | 82.1% |
| 2qtlA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 53.0 | 5.12e-01 | 94.6% | 100.0% |
| 2xnjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 53.0 | 5.18e-01 | 98.9% | 99.0% |
| 1v0fB03 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.62 | 52.0 | 5.38e-01 | 97.8% | 100.0% |
| 2wzpR01 | 2.30.300.20 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Phage tail base-plate attachment protein, domain D1/D2 | 0.62 | 52.0 | 4.07e-01 | 91.4% | 74.5% |
| 2eixA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 54.0 | 5.25e-01 | 100.0% | 94.3% |
| 7k98B01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 37.0 | 3.46e-01 | 97.8% | 49.1% |
| 6c6sD02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 37.0 | 4.32e-01 | 97.8% | 93.3% |
| 1vx7N01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 36.0 | 3.73e-01 | 97.8% | 65.9% |
| 1m1gB03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 36.0 | 4.07e-01 | 71.0% | 88.9% |
| 4f7uG00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 40.0 | 4.43e-01 | 72.0% | 100.0% |
| 1b9mA03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.57 | 34.0 | 3.78e-01 | 100.0% | 76.1% |
| 2e6zA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 34.0 | 4.00e-01 | 71.0% | 91.5% |
| 4kbxA01 | 2.40.37.30 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › | 0.57 | 51.0 | 3.84e-01 | 100.0% | 83.0% |
| 4m7dA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 38.0 | 4.33e-01 | 72.0% | 100.0% |
| 4paaA05 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.57 | 39.0 | 4.13e-01 | 87.1% | 82.3% |
| 4dkaC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 33.0 | 3.47e-01 | 98.9% | 61.6% |
| 4tkoB02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.56 | 32.0 | 3.68e-01 | 96.8% | 77.3% |
| 4ytlA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 32.0 | 3.98e-01 | 71.0% | 100.0% |
| 2e70A00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 34.0 | 3.73e-01 | 71.0% | 76.1% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 36.0 | 4.19e-01 | 73.1% | 96.8% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.56 | 34.0 | 3.87e-01 | 100.0% | 83.6% |
| 2x5fA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 41.0 | 3.96e-01 | 94.6% | 68.3% |
| 2v4dE01 | 2.40.420.20 | Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › | 0.54 | 38.0 | 3.96e-01 | 91.4% | 81.0% |
| 4f0qD01 | 2.30.280.20 | Mainly Beta › Roll › PUA domain-like › | 0.53 | 47.0 | 3.47e-01 | 100.0% | 62.4% |
| 1bnkA00 | 3.10.300.10 | Alpha Beta › Roll › 3-methyladenine DNA Glycosylase; Chain A › Methylpurine-DNA glycosylase (MPG) | 0.53 | 42.0 | 3.32e-01 | 86.0% | 66.0% |
| 1d3bB00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 40.0 | 4.25e-01 | 94.6% | 93.8% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 37.0 | 3.87e-01 | 74.2% | 84.3% |
| 2kc8A00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.53 | 36.0 | 3.62e-01 | 71.0% | 92.6% |
| 2imlA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 37.0 | 3.50e-01 | 74.2% | 75.2% |
| 1gwmA00 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.52 | 37.0 | 3.25e-01 | 100.0% | 47.1% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4026674 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.75 | 58.0 | 6.21e-01 | 100.0% | 96.2% |
| 4636885 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.75 | 56.0 | 6.17e-01 | 96.8% | 98.7% |
| 2556060 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.74 | 58.0 | 6.21e-01 | 100.0% | 98.7% |
| 3596642 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.73 | 59.0 | 6.20e-01 | 100.0% | 94.1% |
| 4660673 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.73 | 57.0 | 6.00e-01 | 100.0% | 91.8% |
| 2161972 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.73 | 58.0 | 6.13e-01 | 100.0% | 95.2% |
| 4518787 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.72 | 55.0 | 6.03e-01 | 100.0% | 100.0% |
| 5026244 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 60.0 | 6.08e-01 | 98.9% | 98.9% |
| 3268226 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.67 | 60.0 | 5.78e-01 | 100.0% | 85.7% |
| 4114062 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 59.0 | 5.74e-01 | 100.0% | 89.0% |
| 2389026 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.65 | 58.0 | 5.70e-01 | 97.8% | 97.0% |
| 4940909 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.65 | 52.0 | 5.41e-01 | 96.8% | 95.3% |
| 3196339 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.65 | 59.0 | 5.23e-01 | 100.0% | 93.1% |
| 4034156 | 1.1.7.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding | 0.64 | 55.0 | 5.57e-01 | 100.0% | 95.6% |
| 3690889 | 1.1.7.112 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RRM_1 | 0.64 | 58.0 | 4.15e-01 | 98.9% | 36.4% |
| 4234560 | 1.1.12.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth | 0.63 | 54.0 | 4.79e-01 | 94.6% | 65.2% |
| 5024264 | 3613.1.1.0 ↗ | beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain | 0.62 | 44.0 | 4.78e-01 | 86.0% | 90.7% |
| 4956344 | 3613.1.1.0 ↗ | beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain | 0.62 | 45.0 | 4.96e-01 | 86.0% | 94.7% |
| 3486328 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 36.0 | 4.31e-01 | 71.0% | 90.0% |
| 3270749 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.61 | 42.0 | 4.51e-01 | 72.0% | 92.5% |
| 4395520 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.61 | 51.0 | 5.15e-01 | 100.0% | 90.5% |
| 3761689 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 54.0 | 4.70e-01 | 100.0% | 87.6% |
| 4108039 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.60 | 41.0 | 4.27e-01 | 80.6% | 76.5% |
| 3833012 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.60 | 43.0 | 4.46e-01 | 74.2% | 84.7% |
| 5057234 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 34.0 | 3.89e-01 | 97.8% | 72.9% |
| 4029093 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 35.0 | 3.01e-01 | 71.0% | 34.8% |
| 3680769 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 52.0 | 4.64e-01 | 96.8% | 90.0% |
| 3821919 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.59 | 34.0 | 4.02e-01 | 72.0% | 86.7% |
| 4101502 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.59 | 35.0 | 4.26e-01 | 71.0% | 100.0% |
| 5037792 | 3613.1.1.0 ↗ | beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain | 0.59 | 47.0 | 4.93e-01 | 86.0% | 95.3% |
| 3264809 | 4.1.1.251 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5 | 0.58 | 35.0 | 4.34e-01 | 98.9% | 100.0% |
| 3777241 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 36.0 | 3.49e-01 | 97.8% | 52.7% |
| 3440094 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.58 | 36.0 | 4.28e-01 | 96.8% | 98.3% |
| 4357819 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.58 | 34.0 | 3.85e-01 | 71.0% | 77.1% |
| 3268892 | 4.1.1.15 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L6e | 0.58 | 38.0 | 2.86e-01 | 74.2% | 26.4% |
| 3237859 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 34.0 | 4.13e-01 | 96.8% | 98.2% |
| 5036498 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.57 | 36.0 | 3.94e-01 | 96.8% | 77.3% |
| 3484006 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 38.0 | 2.87e-01 | 74.2% | 27.2% |
| 5029770 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 34.0 | 3.29e-01 | 71.0% | 50.5% |
| 3786067 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.57 | 39.0 | 4.15e-01 | 71.0% | 90.0% |
| 3710540 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.57 | 40.0 | 4.28e-01 | 73.1% | 98.7% |
| 3415020 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.57 | 34.0 | 3.68e-01 | 97.8% | 68.8% |
| 3486357 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 40.0 | 4.19e-01 | 73.1% | 96.2% |
| 3598654 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 37.0 | 2.99e-01 | 73.1% | 32.6% |
| 3660923 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 33.0 | 3.66e-01 | 72.0% | 74.3% |
| 3604750 | 4.1.1.15 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L6e | 0.56 | 37.0 | 3.00e-01 | 73.1% | 33.5% |
| 4112177 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.56 | 36.0 | 4.11e-01 | 93.5% | 92.3% |
| 5042892 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.56 | 36.0 | 4.20e-01 | 72.0% | 98.3% |
| 3222146 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.56 | 33.0 | 3.83e-01 | 96.8% | 83.1% |
| 4659299 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 32.0 | 3.76e-01 | 96.8% | 85.0% |
| 5051313 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 36.0 | 4.13e-01 | 94.6% | 95.4% |
| 4059465 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.55 | 36.0 | 4.09e-01 | 94.6% | 89.7% |
| 4956443 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 36.0 | 4.17e-01 | 96.8% | 100.0% |
| 3226662 | 7502.1.1.2 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Brix | 0.55 | 45.0 | 3.41e-01 | 90.3% | 72.2% |
| 3619215 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 33.0 | 3.25e-01 | 71.0% | 55.0% |
| 3820064 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.54 | 32.0 | 3.43e-01 | 97.8% | 66.3% |
| 4024769 | 9.11.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like | 0.53 | 34.0 | 3.86e-01 | 86.0% | 90.8% |
| 2721517 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 33.0 | 3.32e-01 | 72.0% | 60.2% |
| 3593865 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 44.0 | 4.13e-01 | 97.8% | 78.3% |
| 5075469 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.51 | 31.0 | 3.59e-01 | 96.8% | 86.2% |
| 3712189 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.51 | 39.0 | 4.00e-01 | 100.0% | 86.7% |
| 3249113 | 11.1.1.698 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TgrO1 | 0.51 | 39.0 | 3.95e-01 | 93.5% | 84.2% |
| 4029199 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 40.0 | 2.37e-01 | 100.0% | 9.8% |
D3
medium
residues 251-477