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SR-VP_2-4_scaffold_141_2548329_prodigal-single.1__X__X__00171
Bact-VirSR-VP_2-4_scaffold_141_2548329_prodigal-single.1__X__X__00171
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 159-248
Domain cluster:
rep: PHAGE-A7--js4906-24-3_S18_scaffold_0_curated_closed_complete_start-adj_prodigal-single.1__X__X__00182__D525-622
CATH (57)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qnfC01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.74 | 55.0 | 4.21e-01 | 100.0% | 34.6% |
| 4kx7A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.73 | 57.0 | 4.27e-01 | 100.0% | 34.7% |
| 2x9zA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.72 | 63.0 | 5.25e-01 | 100.0% | 57.0% |
| 2vbkA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.71 | 52.0 | 3.26e-01 | 100.0% | 13.9% |
| 8begA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.70 | 63.0 | 5.20e-01 | 100.0% | 67.7% |
| 1n67A01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.70 | 58.0 | 4.96e-01 | 100.0% | 57.4% |
| 4b60A01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.69 | 57.0 | 4.88e-01 | 100.0% | 56.6% |
| 4p0dA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.68 | 61.0 | 4.97e-01 | 100.0% | 54.1% |
| 1c7sA01 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.68 | 50.0 | 4.27e-01 | 100.0% | 49.3% |
| 3v10A02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.67 | 58.0 | 4.96e-01 | 100.0% | 59.6% |
| 3oq3B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 51.0 | 4.94e-01 | 97.8% | 74.0% |
| 2okmA00 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 58.0 | 4.99e-01 | 100.0% | 61.0% |
| 4en2A02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.65 | 51.0 | 4.86e-01 | 100.0% | 71.2% |
| 4mtmA01 | 2.60.40.3940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 52.0 | 5.13e-01 | 100.0% | 81.2% |
| 2oezA01 | 2.60.440.10 | Mainly Beta › Sandwich › YacF-like › YacF-like domains | 0.65 | 46.0 | 4.88e-01 | 97.8% | 85.9% |
| 4gaaA01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.65 | 50.0 | 3.91e-01 | 100.0% | 38.9% |
| 2cw5A02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.64 | 54.0 | 5.45e-01 | 96.7% | 94.4% |
| 5b6iA02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.63 | 55.0 | 5.24e-01 | 97.8% | 93.5% |
| 4j3vA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.63 | 44.0 | 4.73e-01 | 98.9% | 85.7% |
| 4i0wD02 | 2.60.120.1290 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 55.0 | 4.96e-01 | 100.0% | 76.2% |
| 6sl4A00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.62 | 56.0 | 4.74e-01 | 100.0% | 64.0% |
| 2zbvC02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.62 | 53.0 | 5.11e-01 | 95.6% | 94.1% |
| 1cwpA00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.61 | 55.0 | 4.68e-01 | 100.0% | 85.2% |
| 4b97A00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.61 | 55.0 | 4.62e-01 | 100.0% | 63.6% |
| 3jxoA00 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.61 | 38.0 | 4.01e-01 | 100.0% | 67.9% |
| 4ba0A04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 52.0 | 4.38e-01 | 96.7% | 57.0% |
| 1g43A00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.60 | 53.0 | 4.45e-01 | 100.0% | 60.6% |
| 2q6iA02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.60 | 51.0 | 4.96e-01 | 97.8% | 91.3% |
| 7q6gA01 | 3.30.1490.110 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.59 | 44.0 | 4.74e-01 | 100.0% | 93.5% |
| 4bcuA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 53.0 | 4.18e-01 | 100.0% | 90.4% |
| 4n0rA03 | 2.60.40.3950 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 52.0 | 4.90e-01 | 97.8% | 80.0% |
| 2petA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 51.0 | 4.77e-01 | 100.0% | 82.8% |
| 1o59A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 53.0 | 4.20e-01 | 100.0% | 87.6% |
| 2vecA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 45.0 | 4.33e-01 | 100.0% | 72.8% |
| 5fq0A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 45.0 | 4.27e-01 | 100.0% | 69.1% |
| 3u83A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 48.0 | 4.57e-01 | 95.6% | 86.2% |
| 1yllA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 44.0 | 4.45e-01 | 100.0% | 82.6% |
| 4aw7A03 | 2.60.120.1200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 50.0 | 4.56e-01 | 100.0% | 95.1% |
| 2o14A01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.56 | 49.0 | 4.24e-01 | 100.0% | 96.6% |
| 2crmA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 42.0 | 4.40e-01 | 96.7% | 92.4% |
| 4lr4A02 | 2.60.120.1430 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 48.0 | 4.01e-01 | 100.0% | 77.4% |
| 1a78A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 48.0 | 4.29e-01 | 100.0% | 93.3% |
| 4iykA02 | 2.60.40.2060 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 47.0 | 4.38e-01 | 100.0% | 83.9% |
| 3zghA00 | 2.60.40.3400 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 47.0 | 3.87e-01 | 100.0% | 61.0% |
| 2zf9A00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 46.0 | 3.74e-01 | 98.9% | 81.0% |
| 6nwmA01 | 2.60.120.280 | Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC | 0.53 | 42.0 | 3.57e-01 | 100.0% | 49.7% |
| 2qjvA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 45.0 | 4.19e-01 | 100.0% | 74.3% |
| 3cewA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 42.0 | 3.99e-01 | 100.0% | 70.9% |
| 1n08A00 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.53 | 46.0 | 3.94e-01 | 100.0% | 63.0% |
| 3dclA02 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.53 | 46.0 | 4.66e-01 | 100.0% | 98.9% |
| 8owfA01 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 45.0 | 4.26e-01 | 98.9% | 92.8% |
| 2vo8A00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 45.0 | 4.04e-01 | 100.0% | 85.2% |
| 3wirA01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.52 | 46.0 | 3.37e-01 | 100.0% | 44.3% |
| 3zugB02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.52 | 44.0 | 3.88e-01 | 97.8% | 68.3% |
| 1dglA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 44.0 | 3.35e-01 | 98.9% | 90.3% |
| 2p17A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 41.0 | 3.04e-01 | 100.0% | 32.7% |
| 3hbzA02 | 2.60.120.890 | Mainly Beta › Sandwich › Jelly Rolls › BT2081, beta-jelly-roll domain | 0.50 | 42.0 | 3.24e-01 | 100.0% | 60.3% |
ECOD (75)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5036760 | 11.41.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Baseplate wedge protein gp6 Ig-like domain › Baseplate wedge protein gp6 Ig-like domain | 0.86 | 81.0 | 7.81e-01 | 98.9% | 97.0% |
| 5004555 | 11.41.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Baseplate wedge protein gp6 Ig-like domain › Baseplate wedge protein gp6 Ig-like domain | 0.85 | 81.0 | 7.07e-01 | 100.0% | 96.0% |
| 3602447 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.70 | 55.0 | 4.43e-01 | 100.0% | 44.1% |
| 4944779 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.70 | 58.0 | 4.45e-01 | 100.0% | 41.0% |
| 3474520 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 54.0 | 5.17e-01 | 88.9% | 71.4% |
| 3495764 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.69 | 63.0 | 4.92e-01 | 100.0% | 51.9% |
| 5047154 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.69 | 52.0 | 3.90e-01 | 100.0% | 31.7% |
| 5056154 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.69 | 49.0 | 4.08e-01 | 100.0% | 43.2% |
| 3969488 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.69 | 43.0 | 3.42e-01 | 100.0% | 32.6% |
| 4135206 | 11.1.1.33 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arch_flagellin | 0.69 | 61.0 | 5.05e-01 | 98.9% | 73.8% |
| 3399519 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.68 | 53.0 | 4.73e-01 | 95.6% | 58.5% |
| 3783233 | 4081.1.1.7 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I | 0.67 | 54.0 | 4.26e-01 | 100.0% | 41.5% |
| 3498171 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 60.0 | 4.62e-01 | 100.0% | 52.5% |
| 4978952 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 57.0 | 5.60e-01 | 98.9% | 87.4% |
| 3580755 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.65 | 59.0 | 4.96e-01 | 100.0% | 94.7% |
| 3403934 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.65 | 50.0 | 5.05e-01 | 100.0% | 83.3% |
| 5041423 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.64 | 48.0 | 4.26e-01 | 100.0% | 54.1% |
| 3408444 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.64 | 55.0 | 5.17e-01 | 95.6% | 87.3% |
| 5011401 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.64 | 57.0 | 5.41e-01 | 98.9% | 89.5% |
| 3892135 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 55.0 | 5.22e-01 | 100.0% | 80.9% |
| 5033534 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.63 | 54.0 | 5.26e-01 | 95.6% | 95.0% |
| 4977728 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 46.0 | 4.71e-01 | 94.4% | 82.4% |
| 4996262 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.62 | 54.0 | 5.17e-01 | 96.7% | 92.4% |
| 3215936 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 54.0 | 5.06e-01 | 97.8% | 78.2% |
| 3899153 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.62 | 53.0 | 5.27e-01 | 98.9% | 90.5% |
| 4322227 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.62 | 54.0 | 5.12e-01 | 97.8% | 91.8% |
| 4952405 | 10.1.2.194 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Lectin_like | 0.62 | 48.0 | 4.77e-01 | 100.0% | 78.9% |
| 4934509 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.62 | 53.0 | 5.12e-01 | 94.4% | 94.0% |
| 4981128 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 54.0 | 5.12e-01 | 96.7% | 89.5% |
| 4963327 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.62 | 53.0 | 5.25e-01 | 95.6% | 94.7% |
| 331482 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.62 | 53.0 | 5.16e-01 | 95.6% | 97.0% |
| 3224553 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 55.0 | 4.71e-01 | 100.0% | 64.8% |
| 4995158 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.61 | 53.0 | 5.27e-01 | 96.7% | 98.9% |
| 1066946 | 11.1.5.8 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_3 | 0.61 | 55.0 | 4.45e-01 | 100.0% | 56.5% |
| 4930219 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.61 | 53.0 | 5.16e-01 | 96.7% | 91.9% |
| 5035333 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.61 | 52.0 | 5.08e-01 | 97.8% | 93.0% |
| 4986214 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.61 | 53.0 | 5.22e-01 | 96.7% | 94.7% |
| 5040611 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.60 | 51.0 | 4.94e-01 | 94.4% | 93.0% |
| 4973676 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.60 | 52.0 | 5.08e-01 | 96.7% | 96.0% |
| 5048248 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.60 | 48.0 | 4.93e-01 | 100.0% | 91.8% |
| 4000993 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.59 | 51.0 | 4.60e-01 | 100.0% | 69.6% |
| 4356528 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.59 | 51.0 | 5.03e-01 | 96.7% | 96.8% |
| 3922212 | 11.1.1.134 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL12p40_C | 0.59 | 46.0 | 4.39e-01 | 97.8% | 72.4% |
| 3832688 | 4081.1.1.7 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I | 0.59 | 52.0 | 4.04e-01 | 100.0% | 44.9% |
| 4942483 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 51.0 | 4.47e-01 | 96.7% | 100.0% |
| 3559539 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.58 | 49.0 | 4.30e-01 | 100.0% | 61.4% |
| 3875538 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.58 | 51.0 | 4.66e-01 | 100.0% | 80.0% |
| 3653845 | 10.32.1.198 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PP2 | 0.58 | 52.0 | 4.21e-01 | 100.0% | 61.2% |
| 5057553 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.58 | 48.0 | 4.89e-01 | 95.6% | 96.7% |
| 3432142 | 10.32.1.198 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PP2 | 0.57 | 50.0 | 3.82e-01 | 98.9% | 80.0% |
| 3966002 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.57 | 44.0 | 4.77e-01 | 98.9% | 100.0% |
| 5007278 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.57 | 47.0 | 4.20e-01 | 100.0% | 63.8% |
| 3724672 | 10.32.1.42 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PINIT | 0.56 | 48.0 | 4.23e-01 | 97.8% | 91.4% |
| 4499275 | 11.1.1.1287 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DoxA | 0.56 | 49.0 | 4.39e-01 | 100.0% | 85.0% |
| 3668002 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.56 | 50.0 | 4.01e-01 | 100.0% | 86.7% |
| 3858692 | 4081.1.1.7 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I | 0.56 | 49.0 | 3.88e-01 | 100.0% | 45.6% |
| 1179927 | 10.12.1.28 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HutD | 0.56 | 44.0 | 4.56e-01 | 100.0% | 89.5% |
| 1280305 | 10.12.1.59 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Pirin_C_2 | 0.55 | 43.0 | 4.23e-01 | 100.0% | 78.4% |
| 3302463 | 207.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 | 0.55 | 50.0 | 3.14e-01 | 100.0% | 23.7% |
| 3476326 | 10.30.1.0 ↗ | beta sandwiches › jelly-roll › Latrophilin 1 gal_lectin domain › Latrophilin 1 gal_lectin domain | 0.55 | 49.0 | 4.46e-01 | 100.0% | 95.8% |
| 3588172 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.55 | 41.0 | 3.54e-01 | 98.9% | 48.7% |
| 5005733 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.54 | 48.0 | 3.88e-01 | 100.0% | 55.6% |
| 4615428 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 47.0 | 4.43e-01 | 100.0% | 83.5% |
| 3622545 | 10.40.1.1 ↗ | beta sandwiches › jelly-roll › PHR domain › PHR domain › PHR | 0.54 | 47.0 | 3.94e-01 | 100.0% | 60.6% |
| 3269110 | 10.20.1.0 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease | 0.53 | 45.0 | 4.30e-01 | 100.0% | 80.0% |
| 4990898 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 46.0 | 4.56e-01 | 97.8% | 98.9% |
| 3590736 | 10.12.1.63 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MPI_cupin_dom | 0.53 | 39.0 | 3.95e-01 | 98.9% | 78.9% |
| 3480708 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.53 | 46.0 | 4.10e-01 | 98.9% | 84.6% |
| 4014581 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.53 | 45.0 | 3.58e-01 | 100.0% | 43.9% |
| 1885 | 11.1.5.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Cohesin | 0.52 | 45.0 | 4.04e-01 | 100.0% | 85.2% |
| 5055413 | 10.20.1.0 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease | 0.52 | 45.0 | 4.04e-01 | 100.0% | 68.5% |
| 3791166 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 45.0 | 4.14e-01 | 100.0% | 91.9% |
| 3818454 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 44.0 | 3.41e-01 | 100.0% | 98.2% |
| 4941305 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 44.0 | 4.18e-01 | 100.0% | 97.3% |
| 3922028 | 10.32.1.181 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TMEM145_N | 0.50 | 43.0 | 3.81e-01 | 96.7% | 100.0% |
D2
medium
residues 13-65
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kr9A02 | 1.10.287.1890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.74 | 48.0 | 4.61e-01 | 71.7% | 59.0% |
| 1hw1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 47.0 | 4.22e-01 | 77.4% | 53.3% |
| 1e2aA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.66 | 45.0 | 3.63e-01 | 75.5% | 37.3% |
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.65 | 47.0 | 4.25e-01 | 98.1% | 56.3% |
| 2aswA00 | 1.10.8.500 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › HAMP domain in histidine kinase | 0.64 | 41.0 | 4.04e-01 | 88.7% | 62.5% |
| 2optA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.64 | 55.0 | 4.09e-01 | 100.0% | 99.3% |
| 1e6cA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 51.0 | 3.70e-01 | 100.0% | 79.4% |
| 7eq1R01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.62 | 51.0 | 3.24e-01 | 96.2% | 50.4% |
| 3purA03 | 1.20.58.1360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 45.0 | 3.49e-01 | 77.4% | 40.0% |
| 6lo8F01 | 1.10.287.810 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains | 0.61 | 48.0 | 4.47e-01 | 90.6% | 82.6% |
| 3l1nA01 | 6.10.140.790 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 47.0 | 4.77e-01 | 98.1% | 88.2% |
| 8b6jF01 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.60 | 47.0 | 4.43e-01 | 88.7% | 92.5% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.59 | 47.0 | 3.65e-01 | 86.8% | 76.3% |
| 2e5yA02 | 1.20.5.440 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain | 0.59 | 46.0 | 5.03e-01 | 98.1% | 100.0% |
| 2j3tD01 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.57 | 47.0 | 3.56e-01 | 94.3% | 36.6% |
| 1yewB00 | 1.20.1450.10 | Mainly Alpha › Up-down Bundle › particulate methane monooxygenase, chain B › Ammonia/particulate methane monooxygenase, subunit A | 0.57 | 46.0 | 3.04e-01 | 92.5% | 29.0% |
| 1m62A00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.57 | 47.0 | 4.00e-01 | 98.1% | 55.2% |
| 2c35A00 | 1.20.1250.40 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › RNA Polymerase II, Rpb4 subunit | 0.57 | 38.0 | 2.95e-01 | 73.6% | 29.7% |
| 1i6zA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.56 | 46.0 | 3.46e-01 | 98.1% | 36.3% |
| 1xt9A00 | 3.40.395.10 | Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A | 0.56 | 45.0 | 3.12e-01 | 94.3% | 91.8% |
| 1b06A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.56 | 43.0 | 3.98e-01 | 83.0% | 70.1% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 48.0 | 3.95e-01 | 98.1% | 54.3% |
| 2fb5A01 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.55 | 45.0 | 4.05e-01 | 92.5% | 65.3% |
| 1m6nA04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.54 | 47.0 | 3.51e-01 | 98.1% | 43.0% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.54 | 46.0 | 4.04e-01 | 98.1% | 64.9% |
| 1k07A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.54 | 47.0 | 3.05e-01 | 100.0% | 58.8% |
| 5nohA00 | 1.20.120.1350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pneumovirus matrix protein 2 (M2), zinc-binding domain | 0.54 | 48.0 | 3.85e-01 | 100.0% | 99.0% |
| 2a3qA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.54 | 45.0 | 3.46e-01 | 90.6% | 67.3% |
| 1ij5A01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 46.0 | 4.09e-01 | 96.2% | 68.4% |
| 4e4eA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.52 | 41.0 | 3.79e-01 | 92.5% | 66.2% |
| 1s35A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 45.0 | 3.67e-01 | 98.1% | 54.5% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 45.0 | 3.64e-01 | 98.1% | 55.9% |
| 3lyeA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.51 | 42.0 | 2.76e-01 | 98.1% | 86.3% |
| 2qkdA04 | 2.60.120.1040 | Mainly Beta › Sandwich › Jelly Rolls › ZPR1, A/B domain | 0.51 | 42.0 | 3.23e-01 | 94.3% | 56.7% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5002735 | 1049.2.1.0 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain | 0.92 | 81.0 | 6.50e-01 | 96.2% | 52.6% |
| 4988108 | 1049.2.1.0 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain | 0.90 | 79.0 | 6.14e-01 | 96.2% | 47.6% |
| 3973303 | 1049.2.1.3 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › PF26776 | 0.87 | 77.0 | 5.86e-01 | 96.2% | 44.3% |
| 3389329 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.76 | 64.0 | 3.89e-01 | 92.5% | 15.3% |
| 4123079 | 4168.1.1.0 ↗ | alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain | 0.74 | 45.0 | 4.47e-01 | 98.1% | 60.0% |
| 3978919 | 604.10.1.1 ↗ | alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac › PTS_IIA | 0.68 | 46.0 | 3.60e-01 | 75.5% | 34.5% |
| 3760989 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.66 | 55.0 | 5.21e-01 | 98.1% | 86.2% |
| 4165011 | 192.6.1.1 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATP-synt_DE | 0.65 | 47.0 | 4.87e-01 | 92.5% | 81.6% |
| 3537848 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.65 | 50.0 | 3.15e-01 | 94.3% | 15.3% |
| 4465072 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.62 | 50.0 | 3.86e-01 | 98.1% | 40.0% |
| 3462746 | 109.4.1.360 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Spatacsin_C | 0.62 | 48.0 | 2.99e-01 | 84.9% | 33.3% |
| 4441061 | 5058.1.1.16 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 | 0.60 | 52.0 | 4.27e-01 | 96.2% | 60.0% |
| 1770995 | 223.2.1.8 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Sybindin | 0.59 | 46.0 | 3.14e-01 | 86.8% | 23.8% |
| 4014292 | 5076.1.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier | 0.59 | 47.0 | 3.02e-01 | 94.3% | 16.3% |
| 3608485 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.58 | 49.0 | 3.73e-01 | 98.1% | 41.7% |
| 4946656 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.58 | 50.0 | 3.85e-01 | 96.2% | 94.2% |
| 4957771 | 5069.1.3.137 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › DUF7521 | 0.58 | 47.0 | 4.12e-01 | 100.0% | 85.6% |
| 4178707 | 192.6.1.1 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATP-synt_DE | 0.57 | 48.0 | 4.93e-01 | 98.1% | 96.0% |
| 3412831 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.56 | 47.0 | 3.44e-01 | 100.0% | 33.3% |
| 4942997 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.56 | 43.0 | 2.73e-01 | 83.0% | 22.2% |
| 3218065 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.55 | 47.0 | 3.48e-01 | 96.2% | 81.4% |
| 3386452 | 5050.1.1.21 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › FTR1 | 0.55 | 47.0 | 3.47e-01 | 98.1% | 77.9% |
| 3614525 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.55 | 49.0 | 3.82e-01 | 98.1% | 48.2% |
| 3611416 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 45.0 | 2.87e-01 | 92.5% | 19.2% |
| 3219593 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.54 | 46.0 | 4.29e-01 | 98.1% | 76.9% |
| 3724003 | 622.1.1.0 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain | 0.53 | 46.0 | 3.70e-01 | 98.1% | 50.0% |
| 3970898 | 6119.1.1.0 ↗ | alpha bundles › Helical bundle domain in CusB › Helical bundle domain in CusB › Helical bundle domain in CusB | 0.53 | 44.0 | 4.51e-01 | 92.5% | 100.0% |
| 5023842 | 601.19.1.62 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › SpoIIM | 0.53 | 46.0 | 3.13e-01 | 96.2% | 51.9% |
| 3621263 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.53 | 48.0 | 4.24e-01 | 100.0% | 77.3% |
| 3947894 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.52 | 44.0 | 3.72e-01 | 88.7% | 78.8% |
| 4110261 | 3748.1.1.2 ↗ | extended segments › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › CSN5_C | 0.52 | 45.0 | 3.89e-01 | 98.1% | 61.2% |
| 4942098 | 5042.1.1.1 ↗ | extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › CorA | 0.52 | 41.0 | 3.91e-01 | 94.3% | 86.8% |
| 3256598 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.52 | 46.0 | 3.77e-01 | 98.1% | 55.8% |
| 3935293 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.51 | 39.0 | 3.40e-01 | 100.0% | 55.0% |
D3
medium
residues 93-158_249-291
Domain cluster:
rep: NC_049498.1__YP_009887297.1__HYQ28_gp31__00031__D90-184
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04865.20 best | Baseplate_J | 25.4 | 2.30e-05 | 85.3% | 87.5% |
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.76 | 41.0 | 4.50e-01 | 72.5% | 64.4% |
| 6oauA02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.65 | 51.0 | 4.92e-01 | 89.0% | 74.6% |
| 3fhwA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 33.0 | 3.48e-01 | 75.2% | 53.5% |
| 7bysA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.64 | 44.0 | 4.27e-01 | 89.9% | 63.1% |
| 2i45D00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 35.0 | 3.69e-01 | 88.1% | 58.6% |
| 1f60A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 52.0 | 5.31e-01 | 89.9% | 99.1% |
| 1o5uA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 26.0 | 2.87e-01 | 89.0% | 46.6% |
| 3wndA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 49.0 | 5.20e-01 | 87.2% | 97.9% |
| 2f4pA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 37.0 | 3.48e-01 | 90.8% | 47.8% |
| 3mcaA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 51.0 | 5.27e-01 | 89.9% | 97.1% |
| 3p26A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.61 | 51.0 | 5.14e-01 | 90.8% | 100.0% |
| 1w0nA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 42.0 | 4.11e-01 | 89.9% | 65.0% |
| 1o59A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 41.0 | 3.83e-01 | 88.1% | 54.7% |
| 1r5bA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.60 | 50.0 | 4.99e-01 | 90.8% | 97.3% |
| 4qawH03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 42.0 | 3.94e-01 | 89.0% | 59.7% |
| 4k7jA02 | 2.60.120.1360 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 34.0 | 3.35e-01 | 97.2% | 49.6% |
| 3bcwA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 32.0 | 3.27e-01 | 91.7% | 54.8% |
| 3butA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 45.0 | 4.34e-01 | 85.3% | 82.4% |
| 3seeA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 46.0 | 3.77e-01 | 89.0% | 61.7% |
| 7zvmA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 33.0 | 3.40e-01 | 89.9% | 58.8% |
| 2vm9A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 40.0 | 3.66e-01 | 86.2% | 54.5% |
| 3m1hD00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 45.0 | 3.87e-01 | 92.7% | 58.5% |
| 4gwmA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 41.0 | 3.64e-01 | 90.8% | 55.5% |
| 2jiiA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 40.0 | 4.04e-01 | 79.8% | 99.1% |
| 5z6pA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.53 | 41.0 | 3.59e-01 | 86.2% | 65.7% |
| 4zxeC00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 37.0 | 3.51e-01 | 86.2% | 59.6% |
| 4ohvA01 | 2.60.120.1030 | Mainly Beta › Sandwich › Jelly Rolls › Clp1, DNA binding domain | 0.52 | 34.0 | 3.78e-01 | 86.2% | 88.7% |
| 4bq2D01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.52 | 43.0 | 3.62e-01 | 90.8% | 61.4% |
| 2ls6A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 38.0 | 3.37e-01 | 87.2% | 52.4% |
| 2zxqA04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 41.0 | 3.67e-01 | 88.1% | 62.9% |
| 8owfA01 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 39.0 | 3.93e-01 | 82.6% | 82.9% |
| 4kq7A02 | 2.60.120.1390 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF2961 | 0.51 | 42.0 | 3.45e-01 | 92.7% | 55.5% |
| 2wmpB00 | 2.60.40.1090 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain | 0.51 | 36.0 | 3.55e-01 | 76.1% | 81.3% |
| 1tg7A05 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 41.0 | 3.56e-01 | 90.8% | 75.6% |
| 3el6A00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.50 | 38.0 | 2.86e-01 | 79.8% | 79.0% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3977754 | 1.1.8.21 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Baseplate_J | 0.87 | 73.0 | 7.78e-01 | 92.7% | 100.0% |
| 3946545 | 1.1.8.21 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Baseplate_J | 0.87 | 65.0 | 7.36e-01 | 90.8% | 100.0% |
| 3947742 | 1.1.8.21 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Baseplate_J | 0.86 | 65.0 | 7.28e-01 | 91.7% | 100.0% |
| 4514735 | 1049.2.1.4 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › Baseplate_J | 0.85 | 71.0 | 5.78e-01 | 100.0% | 50.5% |
| 4957576 | 1.1.8.21 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Baseplate_J | 0.82 | 69.0 | 7.36e-01 | 90.8% | 100.0% |
| 4580145 | 1.1.8.21 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Baseplate_J | 0.79 | 59.0 | 6.56e-01 | 89.9% | 100.0% |
| 1562394 | 1.1.8.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GlxA | 0.78 | 67.0 | 6.79e-01 | 90.8% | 100.0% |
| 4983877 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.68 | 52.0 | 5.61e-01 | 90.8% | 97.8% |
| 4990285 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.68 | 51.0 | 5.52e-01 | 89.9% | 96.6% |
| 3928362 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.67 | 54.0 | 5.61e-01 | 91.7% | 94.9% |
| 3567573 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.67 | 55.0 | 5.32e-01 | 91.7% | 79.2% |
| 5046884 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.67 | 52.0 | 5.60e-01 | 90.8% | 100.0% |
| 4268152 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.66 | 53.0 | 5.15e-01 | 89.9% | 78.3% |
| 4961202 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.65 | 49.0 | 5.30e-01 | 85.3% | 96.7% |
| 4981853 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 51.0 | 4.81e-01 | 86.2% | 71.4% |
| 3594503 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.62 | 54.0 | 5.17e-01 | 96.3% | 91.2% |
| 1563513 | 1.1.8.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Ski7_3rd | 0.62 | 50.0 | 5.09e-01 | 88.1% | 90.7% |
| 140913 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.62 | 51.0 | 5.30e-01 | 89.9% | 99.0% |
| 3729551 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.62 | 51.0 | 5.07e-01 | 90.8% | 96.5% |
| 4943569 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.61 | 51.0 | 5.18e-01 | 89.9% | 99.0% |
| 3476488 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.60 | 51.0 | 5.10e-01 | 91.7% | 99.1% |
| 2756432 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.60 | 51.0 | 4.71e-01 | 92.7% | 78.6% |
| 3309702 | 207.1.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 | 0.60 | 50.0 | 3.26e-01 | 92.7% | 27.0% |
| 2700769 | 10.32.1.12 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_6 | 0.60 | 42.0 | 4.09e-01 | 90.8% | 64.5% |
| 3598857 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.60 | 51.0 | 4.96e-01 | 93.6% | 92.5% |
| 4054625 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.60 | 45.0 | 3.96e-01 | 89.9% | 52.4% |
| 3868560 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.59 | 48.0 | 4.55e-01 | 91.7% | 73.8% |
| 5060627 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.59 | 48.0 | 4.89e-01 | 87.2% | 100.0% |
| 4491119 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.59 | 36.0 | 2.88e-01 | 90.8% | 31.0% |
| 3732427 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.59 | 38.0 | 3.25e-01 | 92.7% | 40.2% |
| 4932663 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.58 | 49.0 | 4.96e-01 | 91.7% | 97.3% |
| 3805853 | 10.32.1.192 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID | 0.58 | 48.0 | 4.03e-01 | 91.7% | 52.8% |
| 1279989 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.58 | 37.0 | 2.93e-01 | 91.7% | 29.9% |
| 3824427 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.58 | 50.0 | 3.33e-01 | 96.3% | 23.6% |
| 4998421 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.58 | 33.0 | 3.30e-01 | 88.1% | 53.6% |
| 1731073 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.57 | 47.0 | 4.22e-01 | 89.0% | 78.6% |
| 3830721 | 207.1.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 | 0.57 | 46.0 | 3.06e-01 | 89.0% | 22.6% |
| 3195147 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.57 | 37.0 | 3.16e-01 | 92.7% | 38.9% |
| 3734469 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.56 | 36.0 | 3.17e-01 | 92.7% | 41.2% |
| 5041729 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 39.0 | 3.63e-01 | 89.9% | 57.0% |
| 4001842 | 10.32.1.1 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Laminin_B | 0.56 | 44.0 | 3.85e-01 | 86.2% | 60.0% |
| 5046609 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 38.0 | 3.95e-01 | 89.0% | 74.3% |
| 4942056 | 11.4.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › Antigen MPT63/MPB63 (immunoprotective extracellular protein) | 0.55 | 46.0 | 4.28e-01 | 92.7% | 72.1% |
| 4000645 | 10.32.1.1 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Laminin_B | 0.55 | 44.0 | 3.79e-01 | 87.2% | 57.2% |
| 4304353 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.55 | 43.0 | 3.83e-01 | 92.7% | 58.1% |
| 3345756 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.55 | 45.0 | 3.49e-01 | 93.6% | 42.2% |
| 4950590 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.55 | 33.0 | 3.13e-01 | 91.7% | 47.4% |
| 3222246 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.55 | 37.0 | 3.74e-01 | 91.7% | 69.1% |
| 3759212 | 10.32.1.1 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Laminin_B | 0.54 | 43.0 | 3.71e-01 | 87.2% | 57.3% |
| 3764995 | 11.2.1.43 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2+FerI | 0.54 | 47.0 | 4.01e-01 | 96.3% | 73.3% |
| 4304839 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.54 | 34.0 | 3.06e-01 | 94.5% | 42.6% |
| 4959031 | 11.4.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › Antigen MPT63/MPB63 (immunoprotective extracellular protein) | 0.54 | 41.0 | 3.99e-01 | 88.1% | 72.0% |
| 3780283 | 10.32.1.1 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Laminin_B | 0.53 | 46.0 | 3.72e-01 | 100.0% | 97.4% |
| 3720434 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.53 | 34.0 | 2.89e-01 | 94.5% | 36.8% |
| 4681454 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.53 | 34.0 | 2.93e-01 | 94.5% | 38.9% |
| 3941824 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.53 | 43.0 | 3.81e-01 | 90.8% | 60.0% |
| 3997291 | 10.32.1.1 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Laminin_B | 0.53 | 43.0 | 3.79e-01 | 90.8% | 64.8% |
| 3920761 | 11.2.1.43 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2+FerI | 0.52 | 44.0 | 3.89e-01 | 95.4% | 80.0% |
| 3759214 | 10.32.1.1 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Laminin_B | 0.51 | 40.0 | 3.49e-01 | 87.2% | 56.2% |
| 4028719 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.51 | 42.0 | 3.94e-01 | 95.4% | 98.6% |
D4
medium
residues 292-345_597-647
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3e7wA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.70 | 48.0 | 4.78e-01 | 82.9% | 67.6% |
| 5o5jC01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.67 | 45.0 | 4.85e-01 | 82.9% | 81.1% |
| 5u89A01 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.67 | 42.0 | 4.45e-01 | 82.9% | 71.7% |
| 1lqlA02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.67 | 52.0 | 5.25e-01 | 81.9% | 93.2% |
| 3gkuC02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.65 | 48.0 | 5.19e-01 | 86.7% | 91.0% |
| 1gpmA03 | 3.30.300.10 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.64 | 49.0 | 4.93e-01 | 81.9% | 87.0% |
| 4oycB00 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.63 | 45.0 | 4.87e-01 | 81.9% | 87.6% |
| 4at7A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.62 | 48.0 | 4.27e-01 | 82.9% | 84.2% |
| 4s3nA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.61 | 47.0 | 4.25e-01 | 82.9% | 77.6% |
| 2omlA02 | 3.30.70.1560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Alpha-L RNA-binding motif | 0.53 | 40.0 | 4.00e-01 | 83.8% | 79.0% |
| 1bdgA01 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.53 | 43.0 | 3.18e-01 | 87.6% | 51.3% |
| 1ofuA02 | 3.30.1330.20 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain | 0.53 | 36.0 | 3.86e-01 | 80.0% | 80.6% |
| 1s3zA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 44.0 | 4.04e-01 | 100.0% | 76.2% |
| 1un2A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 37.0 | 3.08e-01 | 77.1% | 100.0% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5004556 | 327.20.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Baseplate structural protein gp6 C-terminal domain I › Baseplate structural protein gp6 C-terminal domain I › PF26078 | 0.82 | 74.0 | 7.59e-01 | 100.0% | 99.0% |
| 3956496 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.75 | 51.0 | 5.54e-01 | 81.9% | 82.2% |
| 5009414 | 327.5.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C_2 | 0.75 | 48.0 | 5.13e-01 | 82.9% | 75.6% |
| 5083491 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.74 | 51.0 | 5.57e-01 | 81.9% | 87.1% |
| 4432583 | 327.4.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N | 0.71 | 51.0 | 5.53e-01 | 81.9% | 90.6% |
| 4473930 | 327.4.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N | 0.71 | 51.0 | 5.77e-01 | 81.9% | 98.8% |
| 3722096 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.70 | 52.0 | 5.58e-01 | 81.9% | 90.0% |
| 5003241 | 102.7.1.1 ↗ | alpha arrays › HhH/H2TH › Baseplate wedge protein gp7 domain IV › Baseplate wedge protein gp7 domain IV › Tail_P2_I | 0.68 | 53.0 | 5.19e-01 | 96.2% | 74.8% |
| 2444062 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.68 | 48.0 | 5.33e-01 | 81.9% | 91.7% |
| 5016235 | 327.13.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system | 0.68 | 50.0 | 5.36e-01 | 82.9% | 90.0% |
| 5022204 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.68 | 52.0 | 5.43e-01 | 81.9% | 88.4% |
| 3856390 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.66 | 51.0 | 4.25e-01 | 82.9% | 66.5% |
| 3593769 | 327.9.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Probable GTPase Der, C-terminal domain › Probable GTPase Der, C-terminal domain | 0.65 | 46.0 | 5.02e-01 | 80.0% | 91.8% |
| 3714139 | 327.9.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Probable GTPase Der, C-terminal domain › Probable GTPase Der, C-terminal domain › KH_dom-like | 0.64 | 48.0 | 5.09e-01 | 82.9% | 91.1% |
| 3385859 | 327.6.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › NifU | 0.64 | 50.0 | 5.41e-01 | 85.7% | 100.0% |
| 3487312 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.63 | 57.0 | 3.86e-01 | 100.0% | 66.8% |
| 4163850 | 327.4.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N | 0.63 | 47.0 | 5.14e-01 | 81.0% | 98.8% |
| 4145503 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.61 | 40.0 | 3.38e-01 | 82.9% | 37.8% |
| 3602518 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.61 | 51.0 | 4.81e-01 | 91.4% | 86.0% |
| 5063391 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.61 | 51.0 | 4.79e-01 | 91.4% | 84.6% |
| 4967170 | 3261.1.1.0 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb | 0.60 | 45.0 | 4.83e-01 | 82.9% | 93.3% |
| 5033721 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.60 | 47.0 | 4.79e-01 | 90.5% | 84.8% |
| 5033079 | 7584.1.1.11 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › PF27533 | 0.57 | 51.0 | 3.37e-01 | 100.0% | 49.3% |
| 3732125 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.54 | 48.0 | 4.12e-01 | 100.0% | 74.6% |
| 5065713 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.54 | 48.0 | 3.47e-01 | 100.0% | 95.2% |
| 4641347 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.53 | 40.0 | 3.25e-01 | 83.8% | 41.4% |
| 11066 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.51 | 44.0 | 4.04e-01 | 100.0% | 76.2% |
| 3682165 | 2484.1.1.153 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 | 0.50 | 33.0 | 2.79e-01 | 81.9% | 37.8% |
D5
medium
residues 346-440_534-596
Domain cluster:
representative
CATH (76)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pmsC00 | 6.10.140.920 | Special › Helix non-globular › Helix Hairpins › | 0.86 | 42.0 | 5.04e-01 | 72.8% | 68.8% |
| 7p3rA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.85 | 80.0 | 6.18e-01 | 100.0% | 63.1% |
| 2dq0A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.85 | 48.0 | 5.83e-01 | 74.7% | 83.2% |
| 2ch7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.84 | 79.0 | 6.17e-01 | 100.0% | 71.5% |
| 1quuA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 43.0 | 4.76e-01 | 87.3% | 64.3% |
| 8ek4A01 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.81 | 47.0 | 5.11e-01 | 97.5% | 68.4% |
| 6r1nA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.80 | 44.0 | 5.42e-01 | 81.0% | 82.5% |
| 1qu7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.80 | 73.0 | 6.39e-01 | 96.2% | 82.8% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.80 | 46.0 | 5.94e-01 | 97.5% | 100.0% |
| 3lbxB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.80 | 38.0 | 4.65e-01 | 92.4% | 68.2% |
| 3uumA00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.79 | 46.0 | 5.19e-01 | 96.2% | 73.8% |
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.79 | 39.0 | 4.31e-01 | 86.7% | 57.1% |
| 2v0xA01 | 1.10.287.3160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.79 | 52.0 | 5.11e-01 | 86.7% | 62.5% |
| 3ok8A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.78 | 62.0 | 5.54e-01 | 100.0% | 59.8% |
| 1wdzA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.78 | 62.0 | 5.43e-01 | 100.0% | 57.1% |
| 2rd0B00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.78 | 59.0 | 6.30e-01 | 92.4% | 89.2% |
| 6grjB01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.77 | 70.0 | 5.54e-01 | 97.5% | 67.9% |
| 4lwsA00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.77 | 49.0 | 5.99e-01 | 89.2% | 100.0% |
| 2wb7A03 | 1.20.120.870 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › pT26-6p, five-helical bundle domain | 0.77 | 35.0 | 3.80e-01 | 91.1% | 50.0% |
| 2gl2B00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.77 | 48.0 | 5.72e-01 | 85.4% | 90.8% |
| 3tulB00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.77 | 46.0 | 4.96e-01 | 94.9% | 69.9% |
| 3u0cA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.76 | 57.0 | 5.90e-01 | 89.9% | 81.5% |
| 3g67A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.76 | 71.0 | 6.38e-01 | 100.0% | 84.0% |
| 6gy8A01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.75 | 64.0 | 4.94e-01 | 89.2% | 58.7% |
| 1wleA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.75 | 45.0 | 5.33e-01 | 80.4% | 83.3% |
| 4nqiD00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.74 | 60.0 | 5.22e-01 | 94.9% | 57.3% |
| 3qweA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.74 | 62.0 | 5.18e-01 | 100.0% | 53.5% |
| 3na7A00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.74 | 58.0 | 5.01e-01 | 89.2% | 54.4% |
| 7zdtD01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.74 | 46.0 | 3.52e-01 | 75.3% | 29.8% |
| 4fzsA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.74 | 50.0 | 4.57e-01 | 94.3% | 52.2% |
| 3vkgA12 | 1.10.287.2610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.74 | 66.0 | 5.92e-01 | 96.2% | 100.0% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.73 | 42.0 | 4.90e-01 | 83.5% | 78.6% |
| 2v0oB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.73 | 53.0 | 4.30e-01 | 82.9% | 42.8% |
| 4dylA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.73 | 67.0 | 5.73e-01 | 100.0% | 74.8% |
| 2dw4A03 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.72 | 46.0 | 5.60e-01 | 90.5% | 100.0% |
| 1avoB00 | 1.20.120.180 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain | 0.72 | 44.0 | 4.70e-01 | 98.7% | 67.9% |
| 4mycA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.72 | 51.0 | 4.03e-01 | 91.1% | 35.1% |
| 2b5uA02 | 1.10.287.620 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins | 0.72 | 59.0 | 5.93e-01 | 100.0% | 85.1% |
| 4fwvA02 | 1.20.120.1680 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.72 | 40.0 | 4.34e-01 | 81.0% | 64.2% |
| 4mh6A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.71 | 65.0 | 6.56e-01 | 97.5% | 98.1% |
| 4cqiA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 40.0 | 4.69e-01 | 96.8% | 79.4% |
| 8a1gC01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.71 | 54.0 | 5.20e-01 | 88.6% | 69.6% |
| 1y1uA01 | 1.20.1050.20 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain | 0.70 | 52.0 | 4.83e-01 | 99.4% | 61.5% |
| 4iloA00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.70 | 54.0 | 4.68e-01 | 98.7% | 53.4% |
| 3wmeA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.70 | 49.0 | 3.86e-01 | 82.9% | 35.4% |
| 3k66A01 | 1.20.120.770 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Amyloid precursor protein, E2 domain | 0.69 | 48.0 | 4.36e-01 | 76.6% | 53.6% |
| 4dylA02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.69 | 42.0 | 5.21e-01 | 99.4% | 100.0% |
| 3k29A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.69 | 60.0 | 5.98e-01 | 93.0% | 91.3% |
| 1kmiZ02 | 1.10.287.500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.68 | 54.0 | 5.82e-01 | 99.4% | 100.0% |
| 4ke2A00 | 6.10.140.1860 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 62.0 | 5.74e-01 | 99.4% | 98.0% |
| 1fpoC02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.68 | 30.0 | 3.81e-01 | 89.9% | 69.2% |
| 3i2wA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.68 | 51.0 | 4.24e-01 | 84.8% | 47.3% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 41.0 | 5.26e-01 | 72.8% | 100.0% |
| 3cazB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.67 | 52.0 | 4.78e-01 | 98.1% | 61.4% |
| 4gnkE00 | 1.20.1230.10 | Mainly Alpha › Up-down Bundle › Phospholipase C Beta; Chain: A › Phospholipase C beta, distal C-terminal domain | 0.67 | 55.0 | 4.80e-01 | 86.1% | 65.5% |
| 1x04A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.67 | 53.0 | 4.88e-01 | 81.6% | 69.5% |
| 3syvA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.67 | 52.0 | 4.42e-01 | 86.7% | 51.4% |
| 2efkA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.67 | 58.0 | 4.84e-01 | 91.1% | 69.8% |
| 4wpeA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.67 | 61.0 | 5.01e-01 | 97.5% | 71.6% |
| 1ciiA01 | 1.20.250.10 | Mainly Alpha › Up-down Bundle › Colicin Ia; domain 1 › Colicin Ia, domain 1 | 0.67 | 61.0 | 4.66e-01 | 97.5% | 45.1% |
| 4wjg400 | 1.20.1260.80 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.66 | 57.0 | 4.80e-01 | 100.0% | 55.6% |
| 7aalA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.65 | 60.0 | 4.99e-01 | 98.1% | 72.6% |
| 2ficB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.65 | 51.0 | 4.71e-01 | 100.0% | 64.2% |
| 6iknD01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.65 | 59.0 | 4.93e-01 | 100.0% | 58.1% |
| 6v9zA02 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.65 | 46.0 | 3.67e-01 | 89.2% | 35.4% |
| 8i3jA01 | 1.20.920.20 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.64 | 59.0 | 4.99e-01 | 97.5% | 100.0% |
| 1uruA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.64 | 56.0 | 5.10e-01 | 98.1% | 71.3% |
| 3ofnY00 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.64 | 45.0 | 5.17e-01 | 92.4% | 99.1% |
| 6q45G01 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.64 | 54.0 | 5.59e-01 | 89.2% | 99.3% |
| 3s84A02 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.63 | 41.0 | 4.12e-01 | 94.9% | 63.7% |
| 3ajwA00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 50.0 | 5.39e-01 | 88.0% | 100.0% |
| 1i4dA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.62 | 52.0 | 4.91e-01 | 92.4% | 75.0% |
| 6xj1A01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.58 | 52.0 | 4.53e-01 | 100.0% | 67.8% |
| 5y06A01 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 50.0 | 4.48e-01 | 99.4% | 71.2% |
| 3pltA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.55 | 48.0 | 4.40e-01 | 98.1% | 70.6% |
| 6tqfA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.55 | 41.0 | 3.12e-01 | 86.7% | 31.7% |
ECOD (90)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5026993 | 3758.1.1.0 ↗ | alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins | 0.90 | 86.0 | 6.58e-01 | 100.0% | 81.2% |
| 5007124 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.87 | 82.0 | 6.55e-01 | 100.0% | 67.6% |
| 3968781 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.81 | 71.0 | 7.46e-01 | 98.7% | 100.0% |
| 4457393 | 5067.1.1.4 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › MMPL | 0.80 | 75.0 | 4.53e-01 | 98.7% | 24.4% |
| 3964486 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.80 | 73.0 | 7.35e-01 | 100.0% | 95.6% |
| 3715936 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.80 | 67.0 | 6.47e-01 | 88.0% | 96.6% |
| 3956602 | 3755.4.1.20 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › MMPL | 0.79 | 74.0 | 6.77e-01 | 98.7% | 98.0% |
| 5066104 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.79 | 75.0 | 5.01e-01 | 100.0% | 41.3% |
| 3699472 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.79 | 68.0 | 4.66e-01 | 91.1% | 43.4% |
| 3785314 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.79 | 66.0 | 5.65e-01 | 88.6% | 74.3% |
| 3921802 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.78 | 69.0 | 6.80e-01 | 92.4% | 98.2% |
| 3593058 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.78 | 68.0 | 5.58e-01 | 93.7% | 64.3% |
| 3889547 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.78 | 70.0 | 6.58e-01 | 96.8% | 98.9% |
| 4955963 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.77 | 72.0 | 6.65e-01 | 100.0% | 98.0% |
| 3954586 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.77 | 71.0 | 6.90e-01 | 96.8% | 99.4% |
| 3739544 | 2004.1.1.433 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 | 0.77 | 61.0 | 3.94e-01 | 96.8% | 19.4% |
| 3366371 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.77 | 67.0 | 5.49e-01 | 100.0% | 53.7% |
| 5036915 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.77 | 73.0 | 5.94e-01 | 100.0% | 59.6% |
| 4392204 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.76 | 72.0 | 6.35e-01 | 100.0% | 91.8% |
| 5056871 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.76 | 71.0 | 5.60e-01 | 100.0% | 65.5% |
| 4993050 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.76 | 62.0 | 5.64e-01 | 86.7% | 98.6% |
| 4371230 | 2004.1.1.615 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_23, AAA_29 | 0.76 | 71.0 | 4.50e-01 | 100.0% | 50.5% |
| 4259224 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.76 | 61.0 | 6.21e-01 | 94.9% | 85.8% |
| 3512620 | 3755.4.1.1 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › PI3K_P85_iSH2 | 0.76 | 61.0 | 6.08e-01 | 90.5% | 81.9% |
| 5047075 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.76 | 70.0 | 5.40e-01 | 100.0% | 57.4% |
| 5010596 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.75 | 72.0 | 6.31e-01 | 100.0% | 91.8% |
| 4943562 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.75 | 71.0 | 6.43e-01 | 98.7% | 98.5% |
| 1097271 | 3755.1.1.1 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › YscO | 0.75 | 63.0 | 6.48e-01 | 94.3% | 93.2% |
| 3731612 | 2004.1.1.567 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_23 | 0.74 | 66.0 | 4.17e-01 | 94.9% | 22.1% |
| 3482286 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.74 | 68.0 | 6.25e-01 | 99.4% | 97.5% |
| 3165834 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.73 | 68.0 | 5.70e-01 | 100.0% | 96.2% |
| 3598168 | 3755.1.1.0 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related | 0.73 | 68.0 | 6.69e-01 | 99.4% | 100.0% |
| 3962493 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.73 | 67.0 | 6.63e-01 | 97.5% | 98.8% |
| 3737723 | 4177.1.1.5 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Vps5 | 0.73 | 60.0 | 5.40e-01 | 100.0% | 64.8% |
| 4992667 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.72 | 65.0 | 5.39e-01 | 97.5% | 68.0% |
| 3843224 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.72 | 66.0 | 5.73e-01 | 100.0% | 86.3% |
| 3812652 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.72 | 55.0 | 5.09e-01 | 96.8% | 64.1% |
| 3949633 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.72 | 67.0 | 6.13e-01 | 100.0% | 79.0% |
| 3504942 | 5086.1.1.107 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › Dcst2 | 0.71 | 60.0 | 6.04e-01 | 90.5% | 86.9% |
| 5025381 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.71 | 66.0 | 5.13e-01 | 100.0% | 61.8% |
| 5070649 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.71 | 66.0 | 4.19e-01 | 99.4% | 50.5% |
| 3808040 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.71 | 61.0 | 5.84e-01 | 92.4% | 79.2% |
| 3686252 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.71 | 57.0 | 5.23e-01 | 92.4% | 66.0% |
| 4001186 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.71 | 65.0 | 6.06e-01 | 97.5% | 97.9% |
| 4605168 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.71 | 49.0 | 3.87e-01 | 87.3% | 33.9% |
| 3965792 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.71 | 55.0 | 4.54e-01 | 81.0% | 94.5% |
| 3495507 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.70 | 66.0 | 6.50e-01 | 100.0% | 100.0% |
| 4998236 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.70 | 62.0 | 4.51e-01 | 97.5% | 45.1% |
| 4540951 | 3755.3.1.469 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › CC_PcsB | 0.70 | 64.0 | 5.52e-01 | 100.0% | 87.2% |
| 3867942 | 3755.3.1.303 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF21A_4th | 0.69 | 64.0 | 5.58e-01 | 100.0% | 88.1% |
| 3704098 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.69 | 54.0 | 5.33e-01 | 93.0% | 75.9% |
| 3273923 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.69 | 60.0 | 4.33e-01 | 91.1% | 34.9% |
| 4583258 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.69 | 64.0 | 4.61e-01 | 100.0% | 43.7% |
| 5054541 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.69 | 63.0 | 4.31e-01 | 100.0% | 38.1% |
| 3417771 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.69 | 48.0 | 4.29e-01 | 96.2% | 49.8% |
| 3704105 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.69 | 64.0 | 6.41e-01 | 99.4% | 98.1% |
| 3251434 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.69 | 63.0 | 6.06e-01 | 98.1% | 90.0% |
| 3634628 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.69 | 57.0 | 4.18e-01 | 96.8% | 33.9% |
| 4028552 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.68 | 63.0 | 5.43e-01 | 100.0% | 73.9% |
| 3190705 | 2004.1.1.433 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 | 0.68 | 63.0 | 4.20e-01 | 100.0% | 51.4% |
| 3169381 | 874.1.1.0 ↗ | a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain | 0.68 | 61.0 | 5.63e-01 | 98.7% | 99.5% |
| 5040840 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.67 | 62.0 | 3.99e-01 | 100.0% | 22.2% |
| 5054861 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.67 | 59.0 | 4.23e-01 | 96.2% | 85.4% |
| 3712411 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.67 | 63.0 | 5.31e-01 | 100.0% | 77.2% |
| 5056869 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.66 | 61.0 | 5.92e-01 | 98.7% | 97.7% |
| 4346691 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.66 | 53.0 | 4.52e-01 | 83.5% | 53.9% |
| 4939828 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.66 | 59.0 | 4.68e-01 | 100.0% | 52.5% |
| 4086306 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.65 | 58.0 | 5.08e-01 | 93.7% | 84.0% |
| 3175351 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.65 | 57.0 | 5.87e-01 | 100.0% | 100.0% |
| 4875585 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.65 | 46.0 | 3.53e-01 | 82.9% | 32.4% |
| 4001189 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.65 | 59.0 | 4.27e-01 | 100.0% | 34.7% |
| 3624229 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.64 | 53.0 | 4.38e-01 | 100.0% | 49.1% |
| 3588781 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.64 | 44.0 | 3.47e-01 | 86.1% | 32.8% |
| 4969098 | 3926.1.1.0 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D | 0.63 | 59.0 | 5.74e-01 | 100.0% | 98.9% |
| 3520603 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.62 | 55.0 | 3.65e-01 | 94.9% | 25.8% |
| 3609437 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.62 | 47.0 | 5.03e-01 | 94.3% | 92.6% |
| 3240132 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.62 | 53.0 | 4.58e-01 | 90.5% | 61.3% |
| 5002671 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.61 | 58.0 | 5.77e-01 | 100.0% | 98.8% |
| 3920552 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.61 | 55.0 | 4.94e-01 | 96.2% | 74.8% |
| 3422920 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.61 | 42.0 | 3.73e-01 | 86.7% | 47.7% |
| 3168460 | 2004.1.1.429 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 | 0.60 | 55.0 | 3.52e-01 | 98.7% | 53.6% |
| 3252533 | 4177.1.1.8 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 | 0.60 | 44.0 | 3.99e-01 | 97.5% | 54.9% |
| 3661101 | 3755.3.1.290 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › PPI_helical | 0.60 | 53.0 | 5.38e-01 | 96.8% | 99.4% |
| 3923558 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.59 | 55.0 | 5.25e-01 | 100.0% | 87.6% |
| 3739779 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.59 | 51.0 | 4.84e-01 | 94.9% | 80.0% |
| 3774121 | 150.1.1.119 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Clusterin | 0.58 | 54.0 | 5.42e-01 | 100.0% | 100.0% |
| 3712647 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.58 | 53.0 | 4.18e-01 | 99.4% | 89.7% |
| 4177204 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.57 | 51.0 | 4.57e-01 | 97.5% | 79.1% |
| 4244210 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.56 | 52.0 | 4.91e-01 | 98.7% | 99.5% |
| 4260979 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.52 | 47.0 | 4.00e-01 | 100.0% | 62.3% |
D6
medium
residues 648-770
Domain cluster:
rep: NC_054725.1__YP_010059442.1__KHQ85_gp192__00192__D466-576
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26079.1 best | Baseplate_J_C | 27.7 | 3.50e-06 | 45.5% | 65.1% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8b6jF01 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.50 | 25.0 | 3.15e-01 | 90.2% | 82.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4957578 | 3228.1.1.2 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C | 0.92 | 66.0 | 7.68e-01 | 95.1% | 100.0% |
| 4453960 | 3228.1.1.2 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C | 0.84 | 54.0 | 6.62e-01 | 92.7% | 100.0% |
| 4093853 | 3228.1.1.2 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C | 0.83 | 55.0 | 6.66e-01 | 94.3% | 100.0% |
| 4565831 | 3228.1.1.2 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C | 0.82 | 58.0 | 6.74e-01 | 95.1% | 100.0% |
| 1870475 | 3228.1.1.2 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C | 0.81 | 58.0 | 6.63e-01 | 97.6% | 98.9% |
| 3943567 | 3228.1.1.0 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III | 0.81 | 64.0 | 7.05e-01 | 93.5% | 100.0% |
| 5004557 | 3228.1.1.0 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III | 0.79 | 68.0 | 7.21e-01 | 95.1% | 100.0% |
| 3718413 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.65 | 42.0 | 4.99e-01 | 93.5% | 100.0% |
| 3580586 | 229.1.1.4 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › Pch2_N | 0.62 | 43.0 | 4.85e-01 | 95.9% | 97.8% |
| 3927643 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.61 | 40.0 | 4.69e-01 | 92.7% | 97.6% |
| 4964054 | 2485.1.1.34 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Rdx | 0.59 | 25.0 | 3.09e-01 | 95.1% | 58.7% |
| 4952790 | 2485.4.1.1 ↗ | a+b three layers › Thioredoxin-like › Fumarate hydratase N-terminal domain › Fumarate hydratase N-terminal domain › Fumerase | 0.50 | 33.0 | 3.03e-01 | 95.9% | 48.2% |