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SR-VP_2-4_scaffold_141_2548329_prodigal-single.1__X__X__00276
Bact-VirSR-VP_2-4_scaffold_141_2548329_prodigal-single.1__X__X__00276
Identity
- Kingdom:
- phage
Quality
93.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-65
Domain cluster:
representative
CATH (69)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4h4dA02 | 3.40.50.11270 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.74 | 64.0 | 5.59e-01 | 100.0% | 64.6% |
| 3dnfA02 | 3.40.50.11270 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.73 | 63.0 | 5.76e-01 | 100.0% | 73.5% |
| 1j5xA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.69 | 58.0 | 4.54e-01 | 100.0% | 56.7% |
| 2wtbA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.67 | 58.0 | 4.24e-01 | 100.0% | 71.1% |
| 7pcrA01 | 3.40.50.10710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Metallo-hydrolase/oxidoreductase | 0.67 | 56.0 | 4.39e-01 | 100.0% | 88.9% |
| 4bmdA02 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.67 | 57.0 | 5.02e-01 | 100.0% | 87.9% |
| 1h9cA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 58.0 | 4.94e-01 | 100.0% | 68.9% |
| 3mtjA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.67 | 59.0 | 4.25e-01 | 100.0% | 54.2% |
| 2d4aD01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.67 | 57.0 | 4.49e-01 | 100.0% | 97.2% |
| 3kloA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 57.0 | 4.45e-01 | 100.0% | 65.3% |
| 3t54A01 | 3.40.50.11950 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.66 | 57.0 | 4.73e-01 | 100.0% | 69.8% |
| 3dl2A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.66 | 57.0 | 4.49e-01 | 100.0% | 56.1% |
| 2haeA01 | 3.40.50.10380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Malic enzyme, N-terminal domain | 0.66 | 56.0 | 4.33e-01 | 100.0% | 61.8% |
| 3qhaA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.66 | 57.0 | 4.33e-01 | 100.0% | 69.2% |
| 4ziyA01 | 3.40.1390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1 › MurE/MurF, N-terminal domain | 0.66 | 43.0 | 3.87e-01 | 100.0% | 48.3% |
| 6hrdA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.66 | 56.0 | 4.08e-01 | 100.0% | 70.2% |
| 7pceA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.66 | 56.0 | 4.09e-01 | 100.0% | 46.2% |
| 5ix8A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 56.0 | 4.26e-01 | 100.0% | 62.3% |
| 5h80A01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 57.0 | 4.59e-01 | 100.0% | 77.3% |
| 1fp1D02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.65 | 52.0 | 3.56e-01 | 88.9% | 77.9% |
| 2r8rA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 56.0 | 3.94e-01 | 100.0% | 41.1% |
| 3vpbA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 54.0 | 4.79e-01 | 100.0% | 75.2% |
| 1u0tB01 | 3.40.50.10330 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 | 0.64 | 54.0 | 4.34e-01 | 100.0% | 81.3% |
| 3uenA01 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.64 | 50.0 | 4.53e-01 | 100.0% | 61.1% |
| 4xjxA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 53.0 | 3.95e-01 | 100.0% | 52.9% |
| 3i9fB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.64 | 55.0 | 4.11e-01 | 100.0% | 40.8% |
| 3tbfA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.64 | 54.0 | 4.22e-01 | 100.0% | 64.4% |
| 1fgsA01 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.63 | 54.0 | 3.54e-01 | 100.0% | 59.2% |
| 3evtA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 53.0 | 4.43e-01 | 100.0% | 70.0% |
| 3al2A01 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.63 | 52.0 | 4.29e-01 | 100.0% | 49.6% |
| 5kloA02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.63 | 52.0 | 3.84e-01 | 100.0% | 95.4% |
| 4qysA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 49.0 | 4.26e-01 | 100.0% | 53.8% |
| 4pg4A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 54.0 | 4.08e-01 | 100.0% | 61.3% |
| 2eg3A02 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.62 | 53.0 | 4.52e-01 | 100.0% | 73.9% |
| 6pnuA02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.62 | 52.0 | 3.85e-01 | 100.0% | 95.8% |
| 3wicA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 54.0 | 3.93e-01 | 100.0% | 35.0% |
| 4bu0A02 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.62 | 53.0 | 4.93e-01 | 100.0% | 91.7% |
| 2etxA02 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.62 | 51.0 | 4.60e-01 | 100.0% | 64.9% |
| 3kksB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.61 | 53.0 | 4.06e-01 | 100.0% | 52.6% |
| 3do5A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 51.0 | 3.83e-01 | 100.0% | 74.7% |
| 7oufB01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.60 | 53.0 | 4.06e-01 | 100.0% | 57.0% |
| 1asuA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.60 | 52.0 | 3.93e-01 | 100.0% | 52.5% |
| 3kl7A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.60 | 47.0 | 3.37e-01 | 92.1% | 88.6% |
| 2npoA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 52.0 | 4.98e-01 | 98.4% | 94.4% |
| 1yqgA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 50.0 | 3.92e-01 | 98.4% | 69.8% |
| 7p0jA01 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.59 | 49.0 | 4.49e-01 | 98.4% | 88.9% |
| 5iceA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 48.0 | 3.37e-01 | 100.0% | 63.3% |
| 6vr7A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 49.0 | 4.41e-01 | 100.0% | 93.8% |
| 6zpkA01 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.59 | 50.0 | 4.60e-01 | 100.0% | 98.8% |
| 1j6uA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 48.0 | 4.49e-01 | 100.0% | 100.0% |
| 5u95B01 | 3.40.50.980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 50.0 | 3.73e-01 | 100.0% | 63.4% |
| 2i7xA01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.58 | 46.0 | 3.09e-01 | 90.5% | 74.9% |
| 6i6lA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 48.0 | 3.35e-01 | 100.0% | 36.8% |
| 3e1sA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 47.0 | 3.83e-01 | 100.0% | 53.2% |
| 3lstA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 48.0 | 3.33e-01 | 100.0% | 63.2% |
| 5rl9B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 47.0 | 3.74e-01 | 100.0% | 44.3% |
| 6uutB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 47.0 | 3.47e-01 | 100.0% | 85.6% |
| 1auqA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.56 | 46.0 | 3.40e-01 | 100.0% | 77.4% |
| 4ncbA05 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 48.0 | 3.74e-01 | 100.0% | 78.2% |
| 3pi7A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 46.0 | 3.71e-01 | 100.0% | 87.1% |
| 3pp8A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 46.0 | 3.86e-01 | 100.0% | 95.2% |
| 3tpfA02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.56 | 46.0 | 3.59e-01 | 100.0% | 69.6% |
| 5tz8A01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.56 | 48.0 | 3.33e-01 | 100.0% | 82.4% |
| 1hf2A01 | 3.30.750.50 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › Cell-division inhibitor MinC, N-terminal domain | 0.55 | 49.0 | 4.40e-01 | 100.0% | 86.7% |
| 1vq2A00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.54 | 46.0 | 3.44e-01 | 100.0% | 85.5% |
| 3gvxB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 46.0 | 3.89e-01 | 100.0% | 64.6% |
| 4gudB00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.53 | 43.0 | 3.22e-01 | 100.0% | 85.1% |
| 2ch5B02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 42.0 | 3.11e-01 | 100.0% | 97.0% |
| 4lubB01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 42.0 | 3.73e-01 | 100.0% | 90.0% |
ECOD (69)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4205896 | 7588.1.1.1 ↗ | a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB | 0.78 | 68.0 | 5.86e-01 | 100.0% | 62.0% |
| 4591767 | 7588.1.1.1 ↗ | a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB | 0.74 | 63.0 | 5.41e-01 | 100.0% | 59.0% |
| 4077855 | 7588.1.1.1 ↗ | a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB | 0.73 | 64.0 | 5.63e-01 | 100.0% | 66.3% |
| 4247276 | 7588.1.1.1 ↗ | a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB | 0.73 | 63.0 | 5.36e-01 | 100.0% | 59.0% |
| 4166395 | 7588.1.1.1 ↗ | a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB | 0.73 | 63.0 | 5.47e-01 | 100.0% | 65.0% |
| 4453329 | 7588.1.1.1 ↗ | a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB | 0.72 | 61.0 | 5.52e-01 | 100.0% | 68.9% |
| 4618292 | 7588.1.1.1 ↗ | a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB | 0.71 | 61.0 | 5.37e-01 | 100.0% | 65.3% |
| 3269650 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.69 | 61.0 | 5.20e-01 | 100.0% | 62.0% |
| 3912673 | 7568.1.1.5 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › LIG3_BRCT | 0.68 | 60.0 | 5.28e-01 | 100.0% | 66.3% |
| 4098337 | 2488.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot | 0.68 | 58.0 | 4.35e-01 | 100.0% | 51.8% |
| 4589287 | 2488.1.1.9 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Ribo_biogen_C | 0.68 | 59.0 | 4.36e-01 | 100.0% | 51.2% |
| 4162837 | 2493.1.1.1 ↗ | a/b three-layered sandwiches › MurF and HprK N-domain-like › MurF and HprK N-domain-like › MurF and HprK N-domain-like › Mur_ligase | 0.68 | 44.0 | 3.98e-01 | 100.0% | 49.4% |
| 3517301 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.67 | 57.0 | 5.02e-01 | 100.0% | 93.0% |
| 1828345 | 2488.1.1.9 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Ribo_biogen_C | 0.67 | 57.0 | 4.20e-01 | 100.0% | 47.8% |
| 4682202 | 2003.1.1.120 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD-bd_HRPKS_sdrA | 0.67 | 59.0 | 4.38e-01 | 100.0% | 45.5% |
| 4018237 | 2003.1.10.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › PPIP5K2_N | 0.67 | 57.0 | 4.90e-01 | 100.0% | 93.3% |
| 3922252 | 7568.1.1.2 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › PTCB-BRCT | 0.67 | 54.0 | 4.90e-01 | 100.0% | 64.4% |
| 3616604 | 7568.1.1.1 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT | 0.67 | 57.0 | 4.60e-01 | 100.0% | 66.2% |
| 4961483 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.66 | 59.0 | 4.04e-01 | 100.0% | 74.5% |
| 4886165 | 2003.1.8.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › Mur_ligase | 0.66 | 43.0 | 4.30e-01 | 100.0% | 64.6% |
| 3456872 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.66 | 57.0 | 4.95e-01 | 100.0% | 79.0% |
| 3230059 | 7568.1.1.1 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT | 0.66 | 57.0 | 4.75e-01 | 100.0% | 54.8% |
| 3924805 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 58.0 | 3.69e-01 | 100.0% | 56.8% |
| 3730516 | 7568.1.1.2 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › PTCB-BRCT | 0.66 | 55.0 | 4.84e-01 | 100.0% | 63.2% |
| 3659373 | 7568.1.1.4 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT_2 | 0.66 | 56.0 | 4.92e-01 | 100.0% | 79.0% |
| 3948010 | 2003.1.1.36 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 3HCDH_N | 0.66 | 57.0 | 4.07e-01 | 100.0% | 68.2% |
| 5025568 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.65 | 56.0 | 3.71e-01 | 100.0% | 63.6% |
| 4533113 | 2493.1.1.1 ↗ | a/b three-layered sandwiches › MurF and HprK N-domain-like › MurF and HprK N-domain-like › MurF and HprK N-domain-like › Mur_ligase | 0.65 | 42.0 | 3.84e-01 | 100.0% | 49.4% |
| 4020400 | 2003.1.10.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain | 0.65 | 56.0 | 4.47e-01 | 100.0% | 76.3% |
| 4944431 | 2003.1.1.374 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Asp_DH_C | 0.65 | 55.0 | 4.46e-01 | 100.0% | 67.7% |
| 3210518 | 7568.1.1.2 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › PTCB-BRCT | 0.64 | 54.0 | 4.83e-01 | 100.0% | 86.3% |
| 3275618 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.64 | 49.0 | 4.51e-01 | 100.0% | 61.8% |
| 3380599 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.64 | 54.0 | 4.79e-01 | 100.0% | 64.2% |
| 3447755 | 7568.1.1.1 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT | 0.63 | 53.0 | 4.33e-01 | 100.0% | 64.6% |
| 4991289 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.63 | 53.0 | 3.98e-01 | 100.0% | 52.6% |
| 4975411 | 2488.1.1.9 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Ribo_biogen_C | 0.63 | 53.0 | 3.90e-01 | 98.4% | 45.9% |
| 3597565 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.63 | 52.0 | 4.76e-01 | 100.0% | 70.2% |
| 4981292 | 7584.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins | 0.63 | 54.0 | 3.34e-01 | 100.0% | 27.2% |
| 3278693 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.62 | 55.0 | 4.55e-01 | 100.0% | 81.7% |
| 4981535 | 2007.2.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_5 | 0.62 | 52.0 | 4.17e-01 | 100.0% | 75.7% |
| 5061975 | 7584.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding | 0.62 | 52.0 | 3.85e-01 | 100.0% | 58.4% |
| 4003880 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.62 | 51.0 | 3.34e-01 | 100.0% | 43.3% |
| 3689687 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.62 | 54.0 | 3.53e-01 | 100.0% | 41.4% |
| 3449541 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.62 | 51.0 | 4.76e-01 | 100.0% | 75.0% |
| 3473373 | 7568.1.1.1 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT | 0.62 | 51.0 | 4.26e-01 | 100.0% | 52.2% |
| 3598543 | 7568.1.1.6 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › RTT107_BRCT_5 | 0.61 | 51.0 | 4.19e-01 | 100.0% | 50.0% |
| 4982525 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 53.0 | 3.73e-01 | 100.0% | 41.9% |
| 3281709 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.61 | 50.0 | 3.47e-01 | 100.0% | 41.5% |
| 4600970 | 2003.1.8.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like | 0.61 | 50.0 | 4.42e-01 | 100.0% | 81.9% |
| 4038545 | 2003.1.8.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › Mur_ligase | 0.61 | 52.0 | 4.70e-01 | 100.0% | 95.6% |
| 3252479 | 7568.1.1.1 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT | 0.60 | 50.0 | 4.66e-01 | 100.0% | 74.1% |
| 3608913 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.60 | 51.0 | 4.12e-01 | 100.0% | 48.0% |
| None | — | 0.60 | 51.0 | 3.78e-01 | 100.0% | 47.8% | |
| 3613441 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.60 | 52.0 | 4.57e-01 | 100.0% | 92.6% |
| 3410319 | 7568.1.1.6 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › RTT107_BRCT_5 | 0.59 | 47.0 | 3.95e-01 | 100.0% | 49.6% |
| 5032949 | 2003.1.1.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog | 0.58 | 50.0 | 3.66e-01 | 100.0% | 66.7% |
| 3632223 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 50.0 | 3.82e-01 | 100.0% | 41.3% |
| 3498223 | 206.1.3.55 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › TTL, ATPgrasp_YheCD | 0.57 | 49.0 | 3.03e-01 | 100.0% | 75.0% |
| 3963151 | 7568.1.1.1 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT | 0.57 | 49.0 | 4.66e-01 | 100.0% | 86.7% |
| 4992778 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.57 | 48.0 | 3.33e-01 | 96.8% | 87.7% |
| 3687397 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.56 | 47.0 | 3.16e-01 | 100.0% | 42.1% |
| 3222704 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.56 | 45.0 | 3.13e-01 | 100.0% | 46.4% |
| 1492343 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.56 | 47.0 | 3.49e-01 | 100.0% | 60.9% |
| 11458 | 2495.1.1.1 ↗ | a/b three-layered sandwiches › Cell-division inhibitor MinC, N-terminal domain › Cell-division inhibitor MinC, N-terminal domain › Cell-division inhibitor MinC, N-terminal domain › MinC_N | 0.55 | 49.0 | 4.42e-01 | 100.0% | 87.6% |
| 3924907 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.55 | 44.0 | 3.40e-01 | 100.0% | 58.9% |
| 5004763 | 7563.1.1.4 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › YpsA | 0.55 | 45.0 | 3.57e-01 | 100.0% | 98.7% |
| 3935365 | 2007.1.3.27 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Glyco_tran_10_N | 0.54 | 45.0 | 3.80e-01 | 100.0% | 75.8% |
| 4028106 | 2488.1.1.9 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Ribo_biogen_C | 0.52 | 43.0 | 3.28e-01 | 100.0% | 47.4% |
| 3720527 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.51 | 40.0 | 3.13e-01 | 100.0% | 36.4% |
D2
high
residues 68-84_169-266
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14243.12 best | R2K_3 | 66.5 | 4.50e-18 | 93.9% | 51.5% |
| PF18299.7 | R2K_2 | 62.6 | 5.40e-17 | 82.6% | 55.8% |
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tiiB02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.76 | 70.0 | 5.97e-01 | 100.0% | 92.3% |
| 3df7A02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.74 | 67.0 | 6.33e-01 | 97.4% | 94.2% |
| 3orqA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.73 | 67.0 | 5.45e-01 | 100.0% | 65.4% |
| 3vpbB03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.73 | 58.0 | 5.94e-01 | 85.2% | 94.6% |
| 1iowA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.72 | 66.0 | 6.03e-01 | 99.1% | 96.6% |
| 3r5xD02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.72 | 66.0 | 5.95e-01 | 100.0% | 93.5% |
| 6dgiA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.72 | 64.0 | 5.92e-01 | 96.5% | 97.2% |
| 1e4eB01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.72 | 65.0 | 5.87e-01 | 100.0% | 97.4% |
| 3votB02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.72 | 65.0 | 4.83e-01 | 100.0% | 67.2% |
| 1gsoA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.72 | 57.0 | 5.35e-01 | 84.3% | 87.8% |
| 2i87B02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.71 | 65.0 | 5.83e-01 | 100.0% | 86.8% |
| 5dmxB02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.71 | 61.0 | 5.52e-01 | 93.0% | 98.7% |
| 1ehiA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.70 | 56.0 | 5.18e-01 | 85.2% | 90.3% |
| 4e4tA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.70 | 56.0 | 4.62e-01 | 85.2% | 56.9% |
| 3wnzA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.69 | 55.0 | 5.13e-01 | 85.2% | 79.9% |
| 2z04B03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.69 | 55.0 | 4.68e-01 | 85.2% | 59.1% |
| 5h80B03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.69 | 55.0 | 4.24e-01 | 85.2% | 47.4% |
| 3k5iA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.68 | 54.0 | 4.52e-01 | 85.2% | 57.6% |
| 1auvA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.68 | 54.0 | 5.60e-01 | 83.5% | 98.1% |
| 2y4rA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.58 | 43.0 | 4.42e-01 | 78.3% | 99.1% |
| 3ix3A00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.53 | 39.0 | 3.48e-01 | 77.4% | 85.9% |
| 2a9sB00 | 3.90.950.20 | Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like | 0.52 | 35.0 | 3.20e-01 | 70.4% | 84.2% |
ECOD (95)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3830939 | 206.1.3.18 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › D123 | 0.82 | 76.0 | 5.47e-01 | 97.4% | 83.0% |
| 3542430 | 206.1.3.18 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › D123 | 0.81 | 74.0 | 5.31e-01 | 96.5% | 77.6% |
| 3288472 | 206.1.3.32 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › R2K_3 | 0.81 | 75.0 | 6.07e-01 | 98.3% | 99.5% |
| 3971603 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.78 | 73.0 | 5.27e-01 | 100.0% | 83.1% |
| 3256013 | 206.1.3.12 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › TTL | 0.77 | 71.0 | 5.00e-01 | 99.1% | 83.0% |
| 4412811 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.77 | 72.0 | 5.29e-01 | 100.0% | 71.8% |
| 5050960 | 206.1.3.16 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Ins134_P3_kin | 0.77 | 71.0 | 5.74e-01 | 100.0% | 91.9% |
| 2797621 | 206.1.3.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GSH-S_ATP | 0.77 | 68.0 | 5.74e-01 | 94.8% | 99.5% |
| 4233261 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.76 | 71.0 | 5.22e-01 | 100.0% | 67.1% |
| 5011065 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.76 | 70.0 | 5.75e-01 | 100.0% | 94.6% |
| 5046855 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.76 | 70.0 | 5.76e-01 | 100.0% | 97.0% |
| 4192663 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.76 | 68.0 | 5.40e-01 | 96.5% | 89.3% |
| 4937607 | 206.1.3.8 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_3 | 0.76 | 70.0 | 5.73e-01 | 100.0% | 100.0% |
| None | — | 0.76 | 70.0 | 5.60e-01 | 100.0% | 90.5% | |
| 5033884 | 206.1.3.40 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATPgrasp_YheCD | 0.76 | 67.0 | 5.32e-01 | 94.8% | 100.0% |
| 4928041 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.76 | 70.0 | 5.21e-01 | 100.0% | 71.8% |
| 4880373 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.76 | 69.0 | 5.87e-01 | 98.3% | 100.0% |
| 4928453 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.76 | 70.0 | 5.16e-01 | 100.0% | 71.1% |
| 4948293 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.75 | 70.0 | 5.13e-01 | 100.0% | 70.1% |
| 5017878 | 206.1.3.25 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_4 | 0.75 | 68.0 | 4.87e-01 | 98.3% | 68.4% |
| 4060053 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.75 | 68.0 | 5.32e-01 | 97.4% | 84.8% |
| 5041479 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.75 | 69.0 | 5.79e-01 | 100.0% | 98.4% |
| 3979044 | 206.1.3.40 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATPgrasp_YheCD | 0.74 | 66.0 | 5.23e-01 | 96.5% | 100.0% |
| 4966381 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.74 | 68.0 | 4.77e-01 | 100.0% | 65.2% |
| 4212312 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.74 | 68.0 | 5.15e-01 | 100.0% | 85.3% |
| 3278175 | 206.1.3.97 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_4, LAL_C2 | 0.74 | 67.0 | 4.90e-01 | 98.3% | 71.3% |
| 3962156 | 206.1.3.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CPSase_L_D2 | 0.74 | 68.0 | 5.26e-01 | 100.0% | 86.9% |
| 3599869 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.74 | 68.0 | 5.02e-01 | 100.0% | 74.4% |
| 5075262 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.74 | 67.0 | 4.76e-01 | 100.0% | 66.7% |
| 4031327 | 206.1.3.102 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › PF30763 | 0.74 | 63.0 | 5.05e-01 | 91.3% | 88.8% |
| None | — | 0.74 | 66.0 | 5.05e-01 | 98.3% | 85.4% | |
| 5020794 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.73 | 67.0 | 5.15e-01 | 100.0% | 89.8% |
| 5053262 | 206.1.3.8 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_3 | 0.73 | 65.0 | 4.80e-01 | 96.5% | 72.2% |
| 4251336 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.73 | 67.0 | 5.50e-01 | 100.0% | 99.5% |
| 4580640 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.73 | 67.0 | 4.93e-01 | 100.0% | 69.2% |
| 4928000 | 206.1.3.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CPSase_L_D2 | 0.73 | 67.0 | 4.52e-01 | 100.0% | 47.0% |
| 4673494 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.73 | 66.0 | 4.99e-01 | 99.1% | 72.6% |
| 4932969 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.73 | 67.0 | 5.22e-01 | 100.0% | 95.8% |
| 4036608 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.73 | 67.0 | 4.81e-01 | 100.0% | 68.0% |
| 3510399 | 206.1.3.9 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Synapsin_C | 0.73 | 67.0 | 5.40e-01 | 100.0% | 91.6% |
| None | — | 0.73 | 67.0 | 5.27e-01 | 99.1% | 95.6% | |
| 5050758 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.73 | 66.0 | 5.17e-01 | 100.0% | 89.0% |
| 5063412 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.73 | 66.0 | 4.76e-01 | 100.0% | 69.5% |
| 4947584 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.73 | 64.0 | 5.11e-01 | 96.5% | 97.8% |
| 4093838 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.73 | 66.0 | 5.60e-01 | 99.1% | 98.9% |
| 4677601 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.73 | 66.0 | 5.37e-01 | 100.0% | 99.1% |
| None | — | 0.73 | 66.0 | 4.76e-01 | 100.0% | 68.0% | |
| None | — | 0.73 | 66.0 | 5.09e-01 | 100.0% | 83.5% | |
| 1411389 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.73 | 59.0 | 4.77e-01 | 87.0% | 96.3% |
| 4984286 | 206.1.3.41 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATPgrasp_Ter | 0.73 | 66.0 | 5.21e-01 | 100.0% | 88.5% |
| 5078717 | 206.1.3.41 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATPgrasp_Ter | 0.73 | 64.0 | 5.09e-01 | 96.5% | 89.6% |
| 4157290 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.72 | 66.0 | 5.11e-01 | 100.0% | 88.4% |
| 3290898 | 206.1.3.25 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_4 | 0.72 | 65.0 | 4.77e-01 | 97.4% | 68.8% |
| 5058265 | 206.1.3.3 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › PPDK_N | 0.72 | 54.0 | 4.13e-01 | 78.3% | 94.6% |
| None | — | 0.72 | 66.0 | 5.20e-01 | 100.0% | 91.1% | |
| 4996083 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.72 | 64.0 | 5.08e-01 | 96.5% | 98.7% |
| 4276290 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.72 | 66.0 | 5.09e-01 | 100.0% | 92.4% |
| 5058364 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.72 | 64.0 | 5.17e-01 | 96.5% | 99.5% |
| 4062153 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.72 | 66.0 | 4.85e-01 | 100.0% | 72.5% |
| None | — | 0.72 | 66.0 | 5.18e-01 | 100.0% | 91.9% | |
| 4588934 | 206.1.3.25 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_4 | 0.72 | 65.0 | 4.77e-01 | 97.4% | 72.8% |
| 3987360 | 206.1.3.84 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › R2K_2 | 0.72 | 64.0 | 5.53e-01 | 93.9% | 93.5% |
| None | — | 0.72 | 66.0 | 5.15e-01 | 100.0% | 88.7% | |
| 3761616 | 206.1.3.45 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Biotin_carb_C+CPSase_L_D2 | 0.72 | 62.0 | 4.39e-01 | 93.9% | 60.3% |
| None | — | 0.72 | 65.0 | 5.01e-01 | 100.0% | 83.8% | |
| 4414843 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.72 | 64.0 | 5.26e-01 | 98.3% | 100.0% |
| None | — | 0.72 | 65.0 | 5.22e-01 | 99.1% | 95.5% | |
| 4999001 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.72 | 64.0 | 4.78e-01 | 97.4% | 65.4% |
| None | — | 0.72 | 65.0 | 4.79e-01 | 100.0% | 70.0% | |
| 3451180 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.72 | 64.0 | 4.74e-01 | 97.4% | 69.3% |
| 4115841 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.72 | 65.0 | 5.20e-01 | 100.0% | 95.1% |
| None | — | 0.72 | 63.0 | 4.97e-01 | 96.5% | 98.7% | |
| 4464826 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.72 | 65.0 | 5.01e-01 | 100.0% | 83.9% |
| 3607229 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.72 | 64.0 | 5.09e-01 | 98.3% | 98.3% |
| 4568153 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.72 | 65.0 | 5.07e-01 | 100.0% | 92.2% |
| None | — | 0.71 | 64.0 | 5.13e-01 | 97.4% | 97.3% | |
| 4931724 | 206.1.3.36 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATPgrasp_TupA | 0.71 | 64.0 | 4.76e-01 | 98.3% | 78.9% |
| None | — | 0.71 | 61.0 | 5.03e-01 | 93.9% | 100.0% | |
| 4158188 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.71 | 63.0 | 5.04e-01 | 97.4% | 100.0% |
| 4319133 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.71 | 65.0 | 5.05e-01 | 100.0% | 88.2% |
| 4505183 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.71 | 63.0 | 5.11e-01 | 96.5% | 100.0% |
| None | — | 0.71 | 64.0 | 5.20e-01 | 99.1% | 96.7% | |
| 5042836 | 206.1.3.41 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATPgrasp_Ter | 0.71 | 64.0 | 5.30e-01 | 100.0% | 85.9% |
| 4560677 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.71 | 65.0 | 5.14e-01 | 100.0% | 87.4% |
| 3387349 | 206.1.3.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CPSase_L_D2 | 0.71 | 61.0 | 4.94e-01 | 93.9% | 94.1% |
| 4383558 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.71 | 65.0 | 5.13e-01 | 100.0% | 92.2% |
| 980877 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.71 | 61.0 | 5.22e-01 | 93.0% | 100.0% |
| 4986756 | 206.1.3.9 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Synapsin_C | 0.71 | 64.0 | 4.84e-01 | 100.0% | 66.9% |
| 1837665 | 206.1.3.25 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_4 | 0.71 | 61.0 | 5.07e-01 | 94.8% | 95.1% |
| 4441337 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.70 | 61.0 | 5.00e-01 | 94.8% | 98.1% |
| 136748 | 206.1.3.7 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp | 0.70 | 62.0 | 5.11e-01 | 97.4% | 96.6% |
| 4973439 | 206.1.3.8 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_3 | 0.69 | 61.0 | 5.11e-01 | 97.4% | 87.2% |
| 5027371 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.66 | 50.0 | 4.29e-01 | 80.0% | 98.9% |
| None | — | 0.63 | 55.0 | 4.61e-01 | 95.7% | 82.6% | |
| 4944112 | 206.1.3.3 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › PPDK_N | 0.61 | 53.0 | 4.12e-01 | 93.0% | 95.1% |
D3
high
residues 90-154
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dhaA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.61 | 44.0 | 3.57e-01 | 76.9% | 87.0% |
| 5uznA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 43.0 | 4.06e-01 | 80.0% | 98.8% |
| 4c7qA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 43.0 | 4.06e-01 | 84.6% | 98.8% |
| 2jx2A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 43.0 | 4.03e-01 | 84.6% | 94.3% |
| 2dnzA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 42.0 | 3.84e-01 | 81.5% | 87.1% |
| 2dy1A03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.57 | 42.0 | 4.08e-01 | 81.5% | 93.4% |
| 5tipA02 | 2.70.9.20 | Mainly Beta › Distorted Sandwich › Adenovirus Type 2 Hexon; domain 4 › Major capsid protein Vp54 | 0.57 | 48.0 | 3.45e-01 | 100.0% | 84.7% |
| 3smzA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 42.0 | 3.61e-01 | 81.5% | 75.0% |
| 1wi8A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 40.0 | 3.88e-01 | 78.5% | 100.0% |
| 2wv3A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 47.0 | 4.30e-01 | 95.4% | 80.7% |
| 2disA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 40.0 | 3.75e-01 | 78.5% | 100.0% |
| 1hx6A02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 46.0 | 3.75e-01 | 100.0% | 83.0% |
| 2g4bA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 40.0 | 3.68e-01 | 81.5% | 93.5% |
| 2cpdA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 40.0 | 3.86e-01 | 81.5% | 98.7% |
| 5mmjv00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 39.0 | 3.73e-01 | 80.0% | 100.0% |
| 4qu7A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 38.0 | 3.65e-01 | 78.5% | 93.8% |
| 2cqpA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 40.0 | 3.60e-01 | 84.6% | 83.7% |
| 2cpyA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 40.0 | 3.74e-01 | 81.5% | 97.6% |
| 2mgzA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 40.0 | 3.70e-01 | 87.7% | 86.2% |
| 2dgwA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 38.0 | 3.66e-01 | 81.5% | 100.0% |
| 2ws9201 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 46.0 | 3.34e-01 | 100.0% | 62.6% |
| 2rvjA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 38.0 | 3.50e-01 | 83.1% | 90.8% |
| 2cpxA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 40.0 | 3.87e-01 | 87.7% | 100.0% |
| 2if7A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 43.0 | 3.80e-01 | 96.9% | 87.5% |
| 2rilA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 39.0 | 3.59e-01 | 86.2% | 95.8% |
| 2dnnA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 38.0 | 3.61e-01 | 83.1% | 97.6% |
| 2vmhA00 | 2.60.120.1060 | Mainly Beta › Sandwich › Jelly Rolls › NPCBM/NEW2 domain | 0.52 | 43.0 | 3.46e-01 | 100.0% | 78.2% |
| 2okqB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 39.0 | 3.26e-01 | 83.1% | 91.5% |
| 1h2vZ00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 41.0 | 3.80e-01 | 98.5% | 93.5% |
| 5w0hA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 39.0 | 3.72e-01 | 87.7% | 100.0% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3288472 | 206.1.3.32 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › R2K_3 | 0.84 | 78.0 | 5.35e-01 | 100.0% | 40.5% |
| 4947584 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.75 | 68.0 | 4.58e-01 | 100.0% | 28.7% |
| 5075262 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.74 | 67.0 | 4.17e-01 | 100.0% | 19.1% |
| 5058364 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.72 | 63.0 | 4.37e-01 | 100.0% | 29.8% |
| 4935496 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.71 | 61.0 | 4.14e-01 | 100.0% | 27.0% |
| 5050933 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.65 | 49.0 | 4.59e-01 | 81.5% | 97.5% |
| 3935560 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.59 | 45.0 | 4.11e-01 | 84.6% | 91.1% |
| 3737558 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.59 | 44.0 | 4.03e-01 | 81.5% | 86.7% |
| 3432348 | 304.9.1.106 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28977 | 0.58 | 47.0 | 3.91e-01 | 95.4% | 91.5% |
| 4002716 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 44.0 | 3.31e-01 | 84.6% | 45.0% |
| 4418803 | 304.110.1.4 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › UPF0176_N | 0.58 | 44.0 | 3.82e-01 | 83.1% | 81.0% |
| 3389867 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.58 | 46.0 | 4.17e-01 | 95.4% | 92.0% |
| 3533042 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.58 | 43.0 | 3.89e-01 | 83.1% | 85.3% |
| 3598804 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.58 | 43.0 | 3.99e-01 | 81.5% | 97.6% |
| 3328441 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.57 | 43.0 | 3.83e-01 | 83.1% | 86.0% |
| 3798229 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.57 | 42.0 | 3.77e-01 | 80.0% | 83.2% |
| 3267079 | 304.9.1.86 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF26088 | 0.57 | 42.0 | 3.81e-01 | 81.5% | 80.0% |
| 3176921 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.57 | 44.0 | 3.83e-01 | 90.8% | 80.9% |
| 3495038 | 304.9.1.77 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28441 | 0.57 | 41.0 | 3.72e-01 | 80.0% | 83.2% |
| 3794213 | 304.9.1.99 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF29396 | 0.56 | 41.0 | 3.76e-01 | 80.0% | 88.9% |
| 3220778 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.56 | 46.0 | 4.25e-01 | 96.9% | 96.7% |
| 3168803 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.56 | 40.0 | 3.30e-01 | 80.0% | 82.1% |
| 3717420 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.56 | 41.0 | 3.61e-01 | 83.1% | 77.3% |
| 3675857 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.56 | 42.0 | 3.14e-01 | 84.6% | 49.2% |
| 2507517 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.56 | 41.0 | 3.87e-01 | 81.5% | 95.2% |
| 4222883 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.56 | 41.0 | 3.51e-01 | 83.1% | 71.7% |
| 3390434 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.56 | 44.0 | 3.92e-01 | 93.8% | 84.8% |
| 3706084 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.56 | 41.0 | 3.71e-01 | 81.5% | 87.4% |
| 3926456 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.55 | 44.0 | 3.77e-01 | 92.3% | 75.7% |
| 3305359 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.55 | 40.0 | 3.80e-01 | 80.0% | 96.2% |
| 3496351 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.55 | 40.0 | 3.49e-01 | 83.1% | 86.1% |
| 3899627 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.55 | 41.0 | 3.64e-01 | 86.2% | 81.9% |
| 3707719 | 304.9.1.77 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28441 | 0.55 | 39.0 | 3.46e-01 | 80.0% | 72.7% |
| 3798337 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 39.0 | 3.67e-01 | 80.0% | 93.2% |
| 3599679 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.54 | 41.0 | 3.26e-01 | 84.6% | 60.7% |
| 3397461 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.54 | 40.0 | 3.72e-01 | 81.5% | 97.6% |
| 3234998 | 304.9.1.77 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28441 | 0.54 | 38.0 | 3.51e-01 | 80.0% | 85.3% |
| 3253559 | 304.9.1.11 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Nup35_RRM | 0.54 | 42.0 | 3.76e-01 | 93.8% | 81.0% |
| 3689828 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 41.0 | 3.79e-01 | 89.2% | 86.3% |
| 3202439 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.54 | 38.0 | 3.19e-01 | 81.5% | 60.7% |
| 3937170 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.53 | 39.0 | 3.71e-01 | 83.1% | 88.2% |
| 3623286 | 304.9.1.77 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28441 | 0.53 | 39.0 | 3.54e-01 | 84.6% | 84.0% |
| 3216279 | 304.9.1.65 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_ESF1 | 0.53 | 41.0 | 3.34e-01 | 93.8% | 88.7% |
| 3993841 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.53 | 41.0 | 3.62e-01 | 90.8% | 73.3% |
| 3737842 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.52 | 39.0 | 2.42e-01 | 84.6% | 29.2% |