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SR-VP_2-4_scaffold_141_2548329_prodigal-single.1__X__X__00289
Bact-VirSR-VP_2-4_scaffold_141_2548329_prodigal-single.1__X__X__00289
Identity
- Kingdom:
- phage
Quality
87.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-63
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zyyX03 | 3.10.20.880 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.73 | 56.0 | 5.05e-01 | 85.2% | 90.8% |
| 1bkbA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 54.0 | 5.36e-01 | 83.6% | 100.0% |
| 8aasC01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 56.0 | 4.76e-01 | 88.5% | 70.6% |
| 1v1pB02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.70 | 54.0 | 5.11e-01 | 85.2% | 100.0% |
| 3s24A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 56.0 | 4.92e-01 | 90.2% | 79.8% |
| 1k3rA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 51.0 | 5.23e-01 | 80.3% | 96.6% |
| 2qcpX01 | 2.40.50.320 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF | 0.69 | 52.0 | 4.95e-01 | 83.6% | 100.0% |
| 1b3qA04 | 2.40.50.180 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › CheA-289, Domain 4 | 0.69 | 49.0 | 4.92e-01 | 77.0% | 100.0% |
| 2rcnA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 52.0 | 5.26e-01 | 88.5% | 100.0% |
| 2f4iA02 | 2.40.50.420 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Envelope glycoprotein gp160, DUF2291, alpha/beta domain | 0.65 | 51.0 | 4.31e-01 | 91.8% | 80.9% |
| 2xgtB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 52.0 | 4.50e-01 | 91.8% | 85.1% |
| 1bbuA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 51.0 | 4.03e-01 | 91.8% | 60.7% |
| 1ckmA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 53.0 | 4.85e-01 | 95.1% | 77.1% |
| 3r1kA03 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.57 | 33.0 | 2.91e-01 | 86.9% | 34.4% |
| 3fysA02 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.55 | 43.0 | 3.47e-01 | 91.8% | 41.9% |
| 3r7aB00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.55 | 42.0 | 2.95e-01 | 86.9% | 95.2% |
| 2g7zA02 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.55 | 44.0 | 3.54e-01 | 88.5% | 92.5% |
| 2ozgA03 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.54 | 35.0 | 3.07e-01 | 88.5% | 42.6% |
| 4i9xA00 | 2.60.40.3790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 39.0 | 2.82e-01 | 85.2% | 46.5% |
| 4ebgA00 | 3.10.450.560 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 34.0 | 2.90e-01 | 85.2% | 42.3% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4377440 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 51.0 | 5.36e-01 | 75.4% | 98.2% |
| 5001920 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.71 | 52.0 | 5.05e-01 | 78.7% | 86.8% |
| 4939053 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 56.0 | 5.40e-01 | 88.5% | 87.1% |
| 4637390 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 51.0 | 5.21e-01 | 80.3% | 86.7% |
| 3239340 | 2.1.1.126 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF272 | 0.68 | 55.0 | 5.08e-01 | 91.8% | 98.8% |
| 5015045 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 54.0 | 5.26e-01 | 91.8% | 97.1% |
| 4953995 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 53.0 | 4.31e-01 | 90.2% | 63.3% |
| 3895347 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 53.0 | 4.64e-01 | 93.4% | 68.0% |
| 4446654 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 53.0 | 5.11e-01 | 90.2% | 98.6% |
| 4493460 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.65 | 50.0 | 4.23e-01 | 86.9% | 100.0% |
| 4934074 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 49.0 | 4.15e-01 | 86.9% | 68.2% |
| 4411951 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.63 | 49.0 | 3.88e-01 | 86.9% | 82.2% |
| 3955444 | 2.8.1.1 ↗ | beta barrels › OB-fold › mu transposases-C › mu transposases-C › Mu-transpos_C | 0.61 | 49.0 | 4.89e-01 | 90.2% | 84.6% |
| 4942400 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 46.0 | 3.83e-01 | 90.2% | 74.4% |
| 3974395 | 2.8.1.0 ↗ | beta barrels › OB-fold › mu transposases-C › mu transposases-C | 0.58 | 46.0 | 4.55e-01 | 91.8% | 87.7% |
| 5062579 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 44.0 | 4.19e-01 | 86.9% | 90.7% |
| 3608202 | 77.3.1.3 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN | 0.55 | 33.0 | 2.60e-01 | 82.0% | 28.8% |
| 4034423 | 4.8.1.26 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › bPH_8 | 0.55 | 42.0 | 3.91e-01 | 88.5% | 64.7% |
| 4992633 | 4312.1.1.15 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 | 0.54 | 34.0 | 3.23e-01 | 88.5% | 52.0% |
| 4948172 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.54 | 42.0 | 3.69e-01 | 86.9% | 75.8% |
| 3411809 | 309.1.2.1 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › tRNA_SAD | 0.53 | 43.0 | 3.19e-01 | 93.4% | 37.7% |
| 3340221 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 45.0 | 2.79e-01 | 100.0% | 32.2% |
| 3266046 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.52 | 35.0 | 3.55e-01 | 93.4% | 68.3% |
| 4976409 | 283.1.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase | 0.52 | 43.0 | 3.64e-01 | 96.7% | 99.1% |
| 3788192 | 325.1.8.5 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › CSL4_N | 0.52 | 36.0 | 3.25e-01 | 73.8% | 94.3% |
| 3290271 | 268.1.1.3 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2_2 | 0.50 | 32.0 | 2.73e-01 | 86.9% | 36.2% |
D2
high
residues 65-178
Domain cluster:
rep: SR-VP_0-2_scaffold_141_4750547_curated_closed_complete_prodigal-single.1__X__X__00620__D90-195
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ckmA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 39.0 | 4.52e-01 | 86.8% | 75.9% |
| 3s24A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 40.0 | 4.41e-01 | 87.7% | 81.9% |
| 8aasC01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 38.0 | 3.99e-01 | 85.1% | 70.6% |
| 3j7aV00 | 2.40.50.1000 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 47.0 | 4.32e-01 | 88.6% | 82.9% |
| 4ifdI02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 42.0 | 3.96e-01 | 81.6% | 77.1% |
| 4mlgG00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 38.0 | 2.77e-01 | 71.9% | 89.5% |
| 3c7fA02 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.54 | 38.0 | 2.78e-01 | 72.8% | 87.5% |
| 4gnxA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 40.0 | 4.11e-01 | 89.5% | 83.3% |
| 6eugA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 36.0 | 2.61e-01 | 70.2% | 87.9% |
| 3kf8B00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 38.0 | 3.79e-01 | 86.8% | 75.8% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5015043 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 37.0 | 4.90e-01 | 85.1% | 100.0% |
| 3310146 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.63 | 42.0 | 2.90e-01 | 89.5% | 20.8% |
| 4600806 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.60 | 42.0 | 4.33e-01 | 71.9% | 76.4% |
| 3169095 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.60 | 41.0 | 4.75e-01 | 71.1% | 100.0% |
| 3953025 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 37.0 | 4.23e-01 | 83.3% | 88.7% |
| 4942314 | 2.1.1.11 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a | 0.58 | 42.0 | 4.17e-01 | 87.7% | 70.8% |
| 5027788 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 37.0 | 4.05e-01 | 88.6% | 78.5% |
| 4948008 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 40.0 | 4.49e-01 | 85.1% | 90.0% |
| 4323154 | 2.1.1.341 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30208 | 0.58 | 38.0 | 3.80e-01 | 86.8% | 65.2% |
| 4932551 | 2.1.1.11 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a | 0.57 | 41.0 | 4.60e-01 | 87.7% | 94.4% |
| 5067743 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 40.0 | 4.35e-01 | 86.0% | 86.3% |
| 3235739 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 47.0 | 4.67e-01 | 96.5% | 85.8% |
| 4943416 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 42.0 | 4.40e-01 | 88.6% | 85.4% |
| 3266828 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.56 | 41.0 | 4.16e-01 | 75.4% | 86.1% |
| 3595342 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 45.0 | 4.36e-01 | 97.4% | 76.8% |
| 3583375 | 2.1.1.259 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29495 | 0.54 | 39.0 | 4.04e-01 | 85.1% | 81.0% |
| 3699623 | 2.1.1.43 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_3 | 0.53 | 41.0 | 4.32e-01 | 88.6% | 90.5% |
| 3274510 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.52 | 33.0 | 3.90e-01 | 82.5% | 97.3% |
| 3557100 | 206.1.3.16 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Ins134_P3_kin | 0.51 | 38.0 | 3.01e-01 | 77.2% | 71.5% |
| 3470119 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.50 | 45.0 | 3.42e-01 | 99.1% | 70.9% |
| None | — | 0.50 | 42.0 | 2.89e-01 | 89.5% | 27.8% |
D3
high
residues 214-315
Domain cluster:
rep: SR-VP_0-2_scaffold_141_4750547_curated_closed_complete_prodigal-single.1__X__X__00620__D208-282
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2arhA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.68 | 51.0 | 4.44e-01 | 80.4% | 98.1% |
| 2fgeA01 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.65 | 50.0 | 3.75e-01 | 82.4% | 97.2% |
| 4p78C00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.62 | 38.0 | 4.49e-01 | 96.1% | 93.9% |
| 1e5tA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.62 | 45.0 | 3.00e-01 | 73.5% | 34.6% |
| 2eqmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 32.0 | 4.17e-01 | 75.5% | 92.5% |
| 3f6gA01 | 3.30.160.740 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 34.0 | 4.41e-01 | 76.5% | 96.6% |
| 3u1wA01 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 44.0 | 3.64e-01 | 77.5% | 80.9% |
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 42.0 | 3.81e-01 | 74.5% | 95.0% |
| 2ltrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 38.0 | 3.78e-01 | 83.3% | 63.8% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 38.0 | 4.28e-01 | 87.3% | 90.8% |
| 1yr2A02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.57 | 41.0 | 2.86e-01 | 74.5% | 31.4% |
| 1z24A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 43.0 | 3.51e-01 | 79.4% | 59.8% |
| 2oap101 | 3.30.450.380 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.57 | 40.0 | 3.16e-01 | 73.5% | 92.6% |
| 2dmyA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 39.0 | 4.06e-01 | 96.1% | 75.3% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 42.0 | 3.82e-01 | 78.4% | 63.6% |
| 1pbyA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.56 | 42.0 | 4.19e-01 | 80.4% | 93.4% |
| 8hpoK01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 40.0 | 2.62e-01 | 74.5% | 33.5% |
| 1pixA03 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.55 | 48.0 | 3.52e-01 | 100.0% | 84.9% |
| 1omoA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.55 | 41.0 | 3.65e-01 | 80.4% | 79.9% |
| 1di2A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 36.0 | 4.18e-01 | 100.0% | 100.0% |
| 2ffsA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 44.0 | 3.96e-01 | 89.2% | 87.6% |
| 1uhzA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 39.0 | 4.10e-01 | 100.0% | 85.4% |
| 2nugB02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 36.0 | 4.11e-01 | 99.0% | 100.0% |
| 1vybA00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.53 | 46.0 | 3.54e-01 | 95.1% | 90.3% |
| 3fljA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 44.0 | 3.97e-01 | 89.2% | 81.6% |
| 7r97A02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 35.0 | 4.04e-01 | 95.1% | 100.0% |
| 3tfzB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 46.0 | 3.98e-01 | 100.0% | 76.4% |
| 2l33A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 38.0 | 4.02e-01 | 99.0% | 86.8% |
| 3htyA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 40.0 | 4.17e-01 | 81.4% | 93.6% |
| 2d4rA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 46.0 | 4.12e-01 | 100.0% | 78.1% |
| 4aieA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 31.0 | 3.55e-01 | 85.3% | 84.7% |
| 1cbiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 40.0 | 3.71e-01 | 85.3% | 69.1% |
| 6c1zA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 40.0 | 3.69e-01 | 85.3% | 67.4% |
| 6bu2A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 38.0 | 3.40e-01 | 79.4% | 78.7% |
| 3p0lD00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 44.0 | 3.69e-01 | 99.0% | 62.2% |
| 1xfdA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.51 | 42.0 | 2.69e-01 | 91.2% | 19.4% |
| 3f8xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 42.0 | 3.86e-01 | 90.2% | 87.9% |
| 2e8gA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 36.0 | 3.47e-01 | 74.5% | 69.8% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5014686 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.72 | 39.0 | 5.10e-01 | 83.3% | 98.2% |
| 5014688 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.72 | 39.0 | 5.14e-01 | 87.3% | 100.0% |
| 5054047 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.69 | 48.0 | 5.46e-01 | 81.4% | 97.3% |
| 1680313 | 213.1.1.17 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF1122 | 0.67 | 50.0 | 4.07e-01 | 79.4% | 77.2% |
| 5014685 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.66 | 41.0 | 4.99e-01 | 91.2% | 98.5% |
| 3540949 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 42.0 | 3.05e-01 | 72.5% | 31.0% |
| 4155318 | 5.1.3.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b | 0.60 | 42.0 | 2.95e-01 | 72.5% | 41.2% |
| 3691332 | 5.1.3.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40 | 0.57 | 43.0 | 2.78e-01 | 78.4% | 34.7% |
| 3655368 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.57 | 39.0 | 4.41e-01 | 96.1% | 97.3% |
| 4976606 | 2008.3.1.2 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Eukaryotic RPB5 N-terminal domain › Eukaryotic RPB5 N-terminal domain › Mrr_cat | 0.56 | 44.0 | 4.16e-01 | 82.4% | 85.8% |
| 3655033 | 331.9.1.2 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › B2-adapt-app_C | 0.55 | 45.0 | 4.09e-01 | 90.2% | 65.7% |
| 5033931 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 40.0 | 2.71e-01 | 74.5% | 33.9% |
| 4024807 | 206.1.1.87 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, RIO1 | 0.55 | 45.0 | 3.22e-01 | 87.3% | 33.1% |
| 3721418 | 5.1.5.75 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, ANAPC4_WD40 | 0.55 | 41.0 | 2.68e-01 | 78.4% | 34.3% |
| 3408303 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 37.0 | 4.01e-01 | 83.3% | 88.7% |
| 4944319 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.54 | 38.0 | 2.62e-01 | 74.5% | 32.4% |
| None | — | 0.54 | 39.0 | 2.85e-01 | 76.5% | 35.2% | |
| 4872964 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.53 | 46.0 | 3.56e-01 | 96.1% | 91.0% |
| 3962450 | 9.27.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › LpqH › LpqH | 0.53 | 40.0 | 4.02e-01 | 81.4% | 91.4% |
| 5016199 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.53 | 44.0 | 4.08e-01 | 93.1% | 80.7% |
| 3837740 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 36.0 | 4.02e-01 | 70.6% | 87.5% |
| 3970915 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.53 | 40.0 | 2.84e-01 | 80.4% | 32.1% |
| 3962289 | 211.1.1.7 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase_4 | 0.52 | 40.0 | 3.69e-01 | 82.4% | 82.2% |
| 4675814 | 2484.1.1.153 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 | 0.52 | 36.0 | 2.36e-01 | 70.6% | 37.5% |
| 5019907 | 5.1.5.233 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PD40 | 0.52 | 37.0 | 2.64e-01 | 74.5% | 30.8% |
| 4994440 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 35.0 | 3.32e-01 | 70.6% | 88.8% |
| 3953943 | 9.27.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › LpqH › LpqH › Myco_19_kDa | 0.52 | 41.0 | 4.05e-01 | 87.3% | 90.9% |
| 5039195 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.52 | 38.0 | 2.94e-01 | 76.5% | 60.9% |
| 4960852 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.51 | 44.0 | 4.07e-01 | 92.2% | 95.3% |
| 4023269 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.51 | 44.0 | 4.30e-01 | 99.0% | 99.1% |
| 3987244 | 206.1.1.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase | 0.50 | 39.0 | 2.82e-01 | 82.4% | 31.2% |