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SR-VP_2-4_scaffold_141_2548329_prodigal-single.1__X__X__00301
Bact-VirSR-VP_2-4_scaffold_141_2548329_prodigal-single.1__X__X__00301
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 211-255_293-317
Domain cluster:
rep: PLM4_65_coex_sep16_scaffold_0_prodigal-single.1__X__X__00459__D177-276
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3goxA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.86 | 57.0 | 6.64e-01 | 100.0% | 94.1% |
| 2e70A00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.86 | 54.0 | 5.40e-01 | 100.0% | 63.4% |
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.85 | 53.0 | 6.19e-01 | 100.0% | 88.2% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.83 | 54.0 | 6.44e-01 | 97.1% | 100.0% |
| 2jngA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 56.0 | 5.45e-01 | 100.0% | 64.9% |
| 2ckkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 55.0 | 6.22e-01 | 100.0% | 94.3% |
| 2d9tA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 53.0 | 6.20e-01 | 100.0% | 98.0% |
| 1x6gA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.79 | 61.0 | 5.84e-01 | 100.0% | 70.4% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.79 | 50.0 | 5.69e-01 | 100.0% | 86.5% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 51.0 | 5.09e-01 | 100.0% | 64.4% |
| 4fssB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.78 | 60.0 | 6.43e-01 | 100.0% | 93.4% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.78 | 58.0 | 6.31e-01 | 100.0% | 93.2% |
| 1n27A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 55.0 | 4.97e-01 | 100.0% | 54.2% |
| 1yn8A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.77 | 59.0 | 6.34e-01 | 100.0% | 94.9% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.77 | 57.0 | 5.52e-01 | 100.0% | 69.6% |
| 2v1qA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.76 | 59.0 | 6.31e-01 | 100.0% | 95.0% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.76 | 57.0 | 6.00e-01 | 100.0% | 87.5% |
| 2fpeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.76 | 57.0 | 6.07e-01 | 100.0% | 90.3% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.75 | 58.0 | 5.96e-01 | 100.0% | 86.6% |
| 6vlfA03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 56.0 | 6.04e-01 | 100.0% | 96.6% |
| 4fw1A02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.74 | 47.0 | 5.30e-01 | 100.0% | 85.2% |
| 3i35A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 55.0 | 5.99e-01 | 100.0% | 98.2% |
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 47.0 | 4.92e-01 | 100.0% | 73.0% |
| 5ygbA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 53.0 | 5.06e-01 | 100.0% | 66.3% |
| 2yrvA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 54.0 | 4.58e-01 | 100.0% | 48.7% |
| 5f3yA05 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.71 | 57.0 | 5.58e-01 | 100.0% | 79.2% |
| 4ld6A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 53.0 | 4.34e-01 | 100.0% | 47.0% |
| 1zuuA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 52.0 | 5.65e-01 | 98.6% | 100.0% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 53.0 | 5.29e-01 | 100.0% | 79.2% |
| 3pvlA05 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 54.0 | 5.27e-01 | 100.0% | 77.6% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 53.0 | 5.45e-01 | 100.0% | 89.7% |
| 1k1zA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 56.0 | 5.38e-01 | 100.0% | 80.8% |
| 7u32F02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.67 | 46.0 | 5.23e-01 | 100.0% | 100.0% |
| 3upuA03 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 57.0 | 4.66e-01 | 100.0% | 93.9% |
| 1pnjA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 57.0 | 5.31e-01 | 100.0% | 83.7% |
| 2pw9A01 | 4.10.80.30 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › DNA polymerase; domain 6 | 0.62 | 26.0 | 3.43e-01 | 92.9% | 96.0% |
| 2ztbA03 | 2.60.40.3040 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 28.0 | 3.23e-01 | 78.6% | 60.4% |
| 2kieA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.57 | 47.0 | 3.94e-01 | 94.3% | 68.5% |
| 2dt4A00 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.55 | 45.0 | 3.76e-01 | 100.0% | 50.3% |
| 4i1sB00 | 4.10.80.340 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › | 0.53 | 29.0 | 3.25e-01 | 81.4% | 67.3% |
| 4p2iA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.52 | 38.0 | 3.21e-01 | 77.1% | 76.9% |
| 6pqmA01 | 2.60.260.20 | Mainly Beta › Sandwich › HSP40/DNAj peptide-binding domain › Urease metallochaperone UreE, N-terminal domain | 0.51 | 36.0 | 3.77e-01 | 84.3% | 82.5% |
| 2k75A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 37.0 | 3.34e-01 | 80.0% | 71.8% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1108894 | 4.1.1.122 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_17 | 0.86 | 57.0 | 6.45e-01 | 100.0% | 88.9% |
| 3669492 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.84 | 53.0 | 4.08e-01 | 100.0% | 32.1% |
| 3842631 | 4.1.1.243 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa | 0.83 | 58.0 | 5.85e-01 | 100.0% | 72.9% |
| 3408588 | 4.1.1.243 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa | 0.83 | 57.0 | 5.75e-01 | 100.0% | 71.4% |
| 3935130 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 54.0 | 6.01e-01 | 100.0% | 85.5% |
| 3429682 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 51.0 | 5.04e-01 | 100.0% | 60.0% |
| 3888349 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.81 | 56.0 | 4.44e-01 | 100.0% | 38.5% |
| 3911348 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 56.0 | 4.45e-01 | 100.0% | 38.5% |
| 3890893 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.79 | 59.0 | 6.57e-01 | 97.1% | 100.0% |
| 3797477 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 64.0 | 6.66e-01 | 100.0% | 93.8% |
| 4026957 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 50.0 | 5.40e-01 | 100.0% | 76.7% |
| 3170397 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.78 | 59.0 | 5.68e-01 | 100.0% | 70.0% |
| 3921563 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.78 | 59.0 | 5.65e-01 | 100.0% | 70.0% |
| 3469800 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.78 | 57.0 | 5.46e-01 | 98.6% | 67.5% |
| 3917464 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 61.0 | 6.34e-01 | 100.0% | 89.2% |
| 3482868 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.77 | 58.0 | 6.40e-01 | 100.0% | 100.0% |
| 3612090 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 54.0 | 5.85e-01 | 100.0% | 85.0% |
| 3570230 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.77 | 62.0 | 5.71e-01 | 100.0% | 67.8% |
| 3846212 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.76 | 57.0 | 5.47e-01 | 100.0% | 70.0% |
| 4229837 | 4.1.1.354 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY, PF28930 | 0.75 | 67.0 | 4.90e-01 | 98.6% | 38.4% |
| 3550248 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.75 | 54.0 | 4.77e-01 | 100.0% | 53.0% |
| 3784968 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.74 | 64.0 | 6.09e-01 | 100.0% | 81.2% |
| 4138935 | 4.1.1.241 ↗ | beta barrels › SH3 › SH3 › SH3 › NifZ | 0.74 | 64.0 | 6.31e-01 | 100.0% | 88.0% |
| 3554670 | 4.1.1.340 ↗ | beta barrels › SH3 › SH3 › SH3 › PF28930 | 0.74 | 67.0 | 6.05e-01 | 100.0% | 75.8% |
| 3914462 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.74 | 60.0 | 5.48e-01 | 100.0% | 67.8% |
| 3172122 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.74 | 58.0 | 6.20e-01 | 100.0% | 98.3% |
| 3477037 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.73 | 59.0 | 5.96e-01 | 100.0% | 87.1% |
| 3491618 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 51.0 | 5.58e-01 | 87.1% | 92.7% |
| 3929372 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.72 | 57.0 | 5.55e-01 | 97.1% | 77.3% |
| 3585452 | 4.1.1.334 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 | 0.70 | 59.0 | 5.96e-01 | 100.0% | 90.0% |
| 3221547 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 58.0 | 5.56e-01 | 100.0% | 78.8% |
| 3739064 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 52.0 | 5.42e-01 | 100.0% | 86.2% |
| 3572647 | 4.1.1.227 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP_KDM3B | 0.68 | 52.0 | 4.79e-01 | 100.0% | 63.3% |
| 3763497 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.66 | 55.0 | 5.43e-01 | 100.0% | 84.0% |
| 3617677 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 56.0 | 5.34e-01 | 98.6% | 82.5% |
| 1233328 | 4.1.1.116 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_14 | 0.64 | 57.0 | 4.64e-01 | 100.0% | 94.6% |
| 4976092 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 48.0 | 4.38e-01 | 100.0% | 63.3% |
| 3842361 | 1.1.5.76 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › CABIT | 0.61 | 53.0 | 4.86e-01 | 100.0% | 75.8% |
| 3501741 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.60 | 42.0 | 4.53e-01 | 98.6% | 88.3% |
| 3270284 | 3529.1.1.1 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault | 0.58 | 38.0 | 4.04e-01 | 100.0% | 78.3% |
| 4079740 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.57 | 44.0 | 3.98e-01 | 88.6% | 100.0% |
| 4602887 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 38.0 | 3.78e-01 | 72.9% | 71.6% |
| 3828614 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.55 | 50.0 | 4.25e-01 | 100.0% | 74.5% |
| 5054152 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.54 | 47.0 | 3.95e-01 | 100.0% | 58.4% |
| 4964819 | 4.15.1.2 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 | 0.53 | 46.0 | 4.04e-01 | 100.0% | 69.1% |
| 4133267 | 4076.3.1.3 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › SLD5_C | 0.53 | 34.0 | 3.66e-01 | 95.7% | 81.8% |
| 3559265 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.52 | 38.0 | 3.07e-01 | 77.1% | 75.2% |
| 4620869 | 1.1.5.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Mycop_pep_DUF31 | 0.52 | 42.0 | 2.79e-01 | 95.7% | 32.4% |
| 3655450 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.51 | 42.0 | 2.56e-01 | 97.1% | 13.1% |
| 5035282 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.50 | 42.0 | 3.61e-01 | 100.0% | 64.8% |
D2
high
residues 332-347_361-485
Domain cluster:
rep: NC_021330__YP_008059651.1__M202-gp129__00089__D21-171
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00004.36 best | AAA | 59.6 | 6.40e-16 | 84.4% | 97.7% |
D3
high
residues 490-567
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3whkA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.85 | 71.0 | 7.41e-01 | 89.7% | 97.2% |
| 5ubvA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.84 | 72.0 | 7.49e-01 | 92.3% | 100.0% |
| 4a3vB01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.83 | 70.0 | 7.27e-01 | 91.0% | 98.6% |
| 6b5cA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.80 | 65.0 | 6.30e-01 | 87.2% | 97.7% |
| 7swlB02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.79 | 72.0 | 6.53e-01 | 98.7% | 100.0% |
| 4d81A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.77 | 69.0 | 6.50e-01 | 98.7% | 89.4% |
| 2x8aA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.76 | 66.0 | 6.56e-01 | 93.6% | 95.0% |
| 1w5sA01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.76 | 62.0 | 5.95e-01 | 88.5% | 87.5% |
| 2l09A01 | 1.10.8.550 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B | 0.75 | 49.0 | 5.77e-01 | 73.1% | 100.0% |
| 2ly8A00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.74 | 59.0 | 5.12e-01 | 87.2% | 88.4% |
| 1fnnA01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.72 | 59.0 | 5.47e-01 | 91.0% | 81.2% |
| 4zpxA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.72 | 59.0 | 5.56e-01 | 88.5% | 94.6% |
| 3uk6A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.71 | 63.0 | 6.21e-01 | 100.0% | 94.0% |
| 1khyD00 | 1.10.1780.10 | Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain | 0.70 | 52.0 | 4.21e-01 | 76.9% | 89.2% |
| 2c9oB03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.70 | 60.0 | 5.98e-01 | 98.7% | 96.4% |
| 4nftC00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.69 | 59.0 | 4.54e-01 | 94.9% | 98.3% |
| 2qbyA01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.69 | 60.0 | 5.45e-01 | 96.2% | 81.6% |
| 3h4cA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.67 | 50.0 | 4.71e-01 | 79.5% | 69.8% |
| 2l5aA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.67 | 55.0 | 4.05e-01 | 93.6% | 96.4% |
| 2kruA01 | 1.10.8.550 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B | 0.63 | 41.0 | 4.85e-01 | 71.8% | 100.0% |
| 1iuqA01 | 1.10.1200.50 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glycerol-3-phosphate acyltransferase, alpha helical bundle, N-terminal | 0.60 | 42.0 | 4.27e-01 | 73.1% | 86.8% |
| 1r4gA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.59 | 38.0 | 4.28e-01 | 71.8% | 96.2% |
| 5y27A00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.58 | 37.0 | 3.46e-01 | 100.0% | 50.0% |
| 6lcuA02 | 1.10.10.470 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Maltooligosyl trehalose synthase; domain 4 | 0.57 | 36.0 | 3.31e-01 | 88.5% | 47.6% |
| 3b0cW00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.54 | 44.0 | 4.52e-01 | 97.4% | 93.2% |
| 6lpiD03 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.54 | 44.0 | 3.42e-01 | 89.7% | 99.4% |
| 5x8tT00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.51 | 39.0 | 3.20e-01 | 82.1% | 63.9% |
| 3d1uA03 | 1.20.1270.240 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.51 | 38.0 | 3.56e-01 | 83.3% | 83.2% |
| 2fcwA00 | 1.20.81.10 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › RAP domain | 0.50 | 36.0 | 3.29e-01 | 75.6% | 98.1% |
ECOD (93)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5030441 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.88 | 80.0 | 7.82e-01 | 100.0% | 90.6% |
| 4989650 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.87 | 81.0 | 7.72e-01 | 100.0% | 88.9% |
| 4012006 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.87 | 80.0 | 7.82e-01 | 100.0% | 95.3% |
| 3610493 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.87 | 79.0 | 7.91e-01 | 97.4% | 97.5% |
| 4963148 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.87 | 80.0 | 7.56e-01 | 100.0% | 85.6% |
| 3720816 | 148.1.3.212 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_13 | 0.86 | 78.0 | 7.29e-01 | 98.7% | 89.5% |
| 3318092 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.86 | 74.0 | 7.61e-01 | 92.3% | 96.0% |
| 4666971 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.85 | 74.0 | 7.55e-01 | 92.3% | 96.0% |
| 3413919 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.85 | 79.0 | 7.58e-01 | 100.0% | 88.6% |
| 4020947 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.85 | 79.0 | 7.51e-01 | 100.0% | 87.6% |
| 3610034 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.85 | 78.0 | 7.50e-01 | 100.0% | 87.6% |
| 4395479 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.85 | 78.0 | 7.30e-01 | 100.0% | 82.1% |
| 3695484 | 148.1.3.212 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_13 | 0.85 | 78.0 | 6.90e-01 | 100.0% | 75.5% |
| 5002766 | 148.1.3.413 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF30665 | 0.85 | 71.0 | 7.24e-01 | 88.5% | 93.3% |
| 3600972 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.85 | 78.0 | 7.57e-01 | 100.0% | 91.8% |
| 5067203 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.85 | 71.0 | 7.48e-01 | 91.0% | 100.0% |
| 3877790 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.85 | 75.0 | 7.40e-01 | 96.2% | 94.0% |
| 3575738 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.84 | 78.0 | 6.75e-01 | 100.0% | 67.8% |
| 3584100 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.84 | 71.0 | 7.25e-01 | 89.7% | 100.0% |
| 3336203 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.84 | 78.0 | 7.42e-01 | 100.0% | 86.7% |
| 3605789 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.84 | 77.0 | 7.52e-01 | 97.4% | 91.6% |
| 3488593 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.84 | 71.0 | 7.12e-01 | 91.0% | 95.0% |
| 4936778 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.84 | 77.0 | 5.22e-01 | 100.0% | 30.6% |
| 3619127 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.84 | 73.0 | 7.06e-01 | 92.3% | 84.7% |
| 3699521 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.84 | 70.0 | 6.56e-01 | 89.7% | 95.8% |
| 4946868 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.84 | 77.0 | 7.51e-01 | 100.0% | 91.8% |
| 3838010 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.84 | 70.0 | 7.41e-01 | 93.6% | 100.0% |
| 4929924 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.83 | 74.0 | 7.23e-01 | 97.4% | 88.2% |
| 3734971 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.83 | 72.0 | 7.00e-01 | 92.3% | 84.7% |
| 3593416 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.83 | 72.0 | 5.81e-01 | 92.3% | 96.4% |
| 4026670 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.83 | 72.0 | 6.99e-01 | 92.3% | 84.7% |
| 4920635 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.83 | 65.0 | 6.85e-01 | 83.3% | 91.5% |
| 4327043 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.83 | 72.0 | 7.13e-01 | 93.6% | 90.0% |
| 3926386 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.83 | 71.0 | 6.94e-01 | 92.3% | 87.1% |
| 3598631 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.83 | 71.0 | 6.78e-01 | 92.3% | 98.9% |
| 4392993 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.83 | 70.0 | 7.16e-01 | 93.6% | 94.7% |
| 3250030 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.83 | 70.0 | 7.11e-01 | 91.0% | 93.3% |
| 4932596 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.83 | 76.0 | 7.41e-01 | 100.0% | 91.8% |
| 3605402 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.83 | 70.0 | 6.69e-01 | 91.0% | 96.7% |
| 4999188 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.83 | 71.0 | 7.06e-01 | 92.3% | 96.2% |
| 3596693 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.82 | 71.0 | 7.25e-01 | 92.3% | 96.0% |
| 4916303 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.82 | 64.0 | 6.95e-01 | 82.1% | 100.0% |
| 3300054 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.82 | 70.0 | 7.17e-01 | 92.3% | 94.7% |
| 3171757 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.82 | 72.0 | 6.54e-01 | 93.6% | 74.0% |
| 3442812 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.82 | 74.0 | 7.18e-01 | 100.0% | 89.4% |
| 3232045 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.82 | 75.0 | 7.23e-01 | 100.0% | 88.6% |
| 3520608 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.82 | 74.0 | 7.21e-01 | 100.0% | 90.6% |
| 3305472 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.82 | 73.0 | 6.81e-01 | 96.2% | 81.1% |
| 1871534 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.82 | 75.0 | 6.68e-01 | 100.0% | 74.8% |
| 3456399 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.82 | 73.0 | 5.75e-01 | 96.2% | 51.3% |
| 3301182 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.81 | 70.0 | 7.19e-01 | 96.2% | 97.3% |
| 5082057 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.81 | 71.0 | 4.50e-01 | 94.9% | 25.0% |
| 3332753 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.81 | 64.0 | 5.26e-01 | 92.3% | 48.9% |
| 3391392 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.80 | 70.0 | 7.03e-01 | 96.2% | 96.2% |
| 5006795 | 148.1.3.114 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_PRS2_C | 0.79 | 62.0 | 6.51e-01 | 82.1% | 91.4% |
| 5048226 | 148.1.3.114 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_PRS2_C | 0.78 | 71.0 | 7.11e-01 | 98.7% | 96.2% |
| 3627865 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.78 | 67.0 | 6.88e-01 | 100.0% | 98.7% |
| 3064123 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.78 | 58.0 | 6.00e-01 | 78.2% | 100.0% |
| 5036997 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.77 | 71.0 | 6.92e-01 | 100.0% | 94.0% |
| 4876716 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.77 | 62.0 | 6.35e-01 | 88.5% | 91.9% |
| 5050128 | 148.1.3.50 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Cdc6_lid | 0.75 | 61.0 | 6.26e-01 | 88.5% | 96.0% |
| 4224261 | 148.1.3.114 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_PRS2_C | 0.75 | 51.0 | 5.96e-01 | 73.1% | 100.0% |
| 4089409 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.74 | 62.0 | 6.23e-01 | 94.9% | 90.0% |
| 5049514 | 148.1.3.50 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Cdc6_lid | 0.74 | 60.0 | 5.88e-01 | 88.5% | 84.7% |
| 4537789 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.73 | 63.0 | 6.08e-01 | 96.2% | 85.6% |
| 4964866 | 148.1.3.404 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PrkA | 0.73 | 65.0 | 5.15e-01 | 100.0% | 85.6% |
| 3598095 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.72 | 64.0 | 6.05e-01 | 100.0% | 83.0% |
| 4001373 | 148.1.3.18 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TIP49_C | 0.72 | 64.0 | 5.82e-01 | 100.0% | 74.3% |
| 3076071 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.72 | 64.0 | 5.91e-01 | 100.0% | 78.0% |
| 5003519 | 148.1.3.50 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Cdc6_lid | 0.72 | 60.0 | 5.84e-01 | 92.3% | 88.2% |
| 3227435 | 148.1.3.18 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TIP49_C | 0.72 | 64.0 | 5.88e-01 | 100.0% | 78.0% |
| 4345957 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.71 | 60.0 | 6.14e-01 | 93.6% | 97.3% |
| 4025082 | 148.1.3.18 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TIP49_C | 0.71 | 63.0 | 5.77e-01 | 100.0% | 74.3% |
| 5025839 | 148.1.3.50 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Cdc6_lid | 0.71 | 57.0 | 5.83e-01 | 88.5% | 96.0% |
| 5027610 | 148.1.3.50 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Cdc6_lid | 0.71 | 63.0 | 6.15e-01 | 98.7% | 95.3% |
| 3666007 | 148.1.3.18 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TIP49_C | 0.71 | 63.0 | 6.05e-01 | 100.0% | 86.7% |
| 4945941 | 148.1.3.406 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Cdc6_C | 0.71 | 60.0 | 6.03e-01 | 92.3% | 97.5% |
| 3630661 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.71 | 62.0 | 6.22e-01 | 100.0% | 96.2% |
| 4030428 | 148.1.3.18 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TIP49_C | 0.71 | 63.0 | 5.93e-01 | 100.0% | 82.1% |
| 4204294 | 148.1.3.21 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_4 | 0.71 | 58.0 | 5.95e-01 | 91.0% | 94.7% |
| 4468783 | 148.1.3.18 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TIP49_C | 0.71 | 62.0 | 5.76e-01 | 100.0% | 78.0% |
| 5061244 | 148.1.3.50 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Cdc6_lid | 0.70 | 61.0 | 6.12e-01 | 98.7% | 100.0% |
| 3098681 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.70 | 62.0 | 5.88e-01 | 100.0% | 83.0% |
| 3926437 | 148.1.3.18 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TIP49_C | 0.70 | 61.0 | 5.80e-01 | 100.0% | 85.3% |
| 4970852 | 148.1.3.18 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TIP49_C | 0.69 | 61.0 | 5.78e-01 | 100.0% | 84.0% |
| 4374130 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.69 | 59.0 | 5.80e-01 | 97.4% | 90.6% |
| 4961852 | 148.1.3.50 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Cdc6_lid | 0.69 | 59.0 | 5.94e-01 | 97.4% | 95.0% |
| 4939645 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.69 | 58.0 | 5.26e-01 | 92.3% | 69.5% |
| 3289038 | 148.1.3.55 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Mg_chelatase_C | 0.69 | 50.0 | 5.17e-01 | 78.2% | 81.3% |
| 52232 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.68 | 56.0 | 5.71e-01 | 91.0% | 100.0% |
| 4201751 | 148.1.3.21 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_4 | 0.68 | 55.0 | 5.38e-01 | 91.0% | 84.7% |
| 3455739 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.63 | 45.0 | 4.32e-01 | 74.4% | 65.6% |
| 4307412 | 181.1.1.27 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › ATP-cone | 0.58 | 43.0 | 4.20e-01 | 76.9% | 88.2% |
D4
medium
residues 90-200_256-292