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SR-VP_2-4_scaffold_141_2952615_prodigal-single.1__X__X__00080
Bact-VirSR-VP_2-4_scaffold_141_2952615_prodigal-single.1__X__X__00080
Identity
- Kingdom:
- phage
Quality
70.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 131-197
Domain cluster:
representative
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xmoA02 | 1.10.246.180 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.87 | 63.0 | 5.74e-01 | 80.6% | 59.3% |
| 1c9bA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.78 | 56.0 | 4.72e-01 | 74.6% | 84.0% |
| 2f2cA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.78 | 55.0 | 4.66e-01 | 77.6% | 46.2% |
| 4mk6A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.74 | 66.0 | 4.78e-01 | 100.0% | 36.2% |
| 3lwjA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.72 | 62.0 | 4.48e-01 | 97.0% | 76.2% |
| 3mvpA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.70 | 61.0 | 4.70e-01 | 97.0% | 44.3% |
| 3h4cA02 | 1.10.472.110 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.70 | 48.0 | 4.04e-01 | 71.6% | 45.5% |
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.69 | 47.0 | 4.45e-01 | 79.1% | 58.0% |
| 2h8pC00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 50.0 | 5.35e-01 | 89.6% | 91.2% |
| 6ldiF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 50.0 | 4.49e-01 | 85.1% | 55.2% |
| 2a6hF01 | 1.20.120.1810 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.66 | 55.0 | 4.06e-01 | 94.0% | 70.5% |
| 4m70B00 | 1.10.246.200 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain | 0.66 | 48.0 | 4.41e-01 | 82.1% | 58.2% |
| 3l1nA01 | 6.10.140.790 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 42.0 | 4.68e-01 | 73.1% | 84.3% |
| 4dxwA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.65 | 49.0 | 4.15e-01 | 80.6% | 73.2% |
| 2efeA01 | 1.10.246.120 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.65 | 49.0 | 4.69e-01 | 95.5% | 69.1% |
| 2fm8C01 | 1.10.4150.10 | Mainly Alpha › Orthogonal Bundle › SipA N-terminal domain-like › SipA N-terminal domain-like | 0.65 | 49.0 | 3.49e-01 | 82.1% | 27.3% |
| 4k5yA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.65 | 47.0 | 3.18e-01 | 77.6% | 96.0% |
| 2g8lB01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.63 | 43.0 | 4.31e-01 | 89.6% | 71.6% |
| 6mh4A03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.62 | 42.0 | 4.05e-01 | 76.1% | 59.5% |
| 5hwoA00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.62 | 55.0 | 3.38e-01 | 100.0% | 69.6% |
| 2b5uA02 | 1.10.287.620 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins | 0.62 | 47.0 | 3.60e-01 | 83.6% | 91.3% |
| 2i5uA00 | 1.10.10.630 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DnaD domain-like | 0.61 | 43.0 | 4.12e-01 | 73.1% | 63.6% |
| 3bhqA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 52.0 | 3.78e-01 | 100.0% | 77.2% |
| 2bskB00 | 1.10.287.810 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains | 0.61 | 45.0 | 4.61e-01 | 85.1% | 83.1% |
| 4nooB00 | 1.10.8.1160 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.60 | 48.0 | 4.23e-01 | 85.1% | 84.2% |
| 1z6oM00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.60 | 45.0 | 3.28e-01 | 80.6% | 51.3% |
| 4yzgA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.60 | 44.0 | 2.92e-01 | 79.1% | 26.5% |
| 1lb3A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.60 | 45.0 | 3.38e-01 | 80.6% | 56.3% |
| 2pbxA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 49.0 | 3.69e-01 | 100.0% | 79.2% |
| 3nzpB03 | 1.20.58.930 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 39.0 | 3.69e-01 | 73.1% | 57.0% |
| 1m6nA04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.59 | 44.0 | 3.58e-01 | 92.5% | 40.0% |
| 3cswC01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.58 | 38.0 | 3.30e-01 | 85.1% | 42.5% |
| 1ekrA00 | 3.30.70.640 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Molybdopterin cofactor biosynthesis C (MoaC) domain | 0.57 | 47.0 | 3.74e-01 | 95.5% | 43.4% |
| 2l3lA01 | 1.20.58.1250 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain | 0.57 | 41.0 | 3.52e-01 | 77.6% | 47.2% |
| 3kp9A01 | 1.20.1440.130 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › VKOR domain | 0.57 | 44.0 | 3.32e-01 | 82.1% | 77.2% |
| 1jvmB00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 45.0 | 4.05e-01 | 91.0% | 78.0% |
| 1lkvX02 | 1.10.220.30 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain | 0.56 | 44.0 | 3.65e-01 | 91.0% | 75.0% |
| 1f14A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 47.0 | 3.37e-01 | 94.0% | 39.8% |
| 1s35A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 39.0 | 3.41e-01 | 100.0% | 50.5% |
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.54 | 43.0 | 4.04e-01 | 94.0% | 75.9% |
| 1wcrA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.53 | 44.0 | 3.78e-01 | 89.6% | 70.9% |
| 4f0jA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 40.0 | 2.70e-01 | 86.6% | 23.7% |
| 1cqxA01 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.53 | 43.0 | 3.48e-01 | 100.0% | 42.7% |
| 3pr6A00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.52 | 38.0 | 3.16e-01 | 83.6% | 97.9% |
| 2yfaB01 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.52 | 43.0 | 3.63e-01 | 92.5% | 71.4% |
| 3nbxX03 | 1.20.58.1510 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 44.0 | 3.84e-01 | 94.0% | 68.3% |
| 3vkgB04 | 1.10.8.710 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Dynein motor, AAA1 domain, small subdomain | 0.51 | 39.0 | 3.27e-01 | 83.6% | 85.2% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3534849 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.87 | 63.0 | 5.08e-01 | 79.1% | 43.5% |
| 3507767 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.86 | 56.0 | 4.90e-01 | 71.6% | 47.4% |
| 3517691 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.86 | 59.0 | 4.76e-01 | 76.1% | 40.0% |
| 3649730 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.85 | 62.0 | 5.58e-01 | 77.6% | 56.7% |
| 3742618 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.84 | 57.0 | 4.75e-01 | 74.6% | 43.5% |
| 4986197 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.84 | 61.0 | 5.45e-01 | 76.1% | 80.0% |
| 3535287 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.83 | 57.0 | 5.43e-01 | 74.6% | 62.7% |
| 3909404 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.81 | 58.0 | 4.87e-01 | 76.1% | 47.6% |
| 3568720 | 101.1.10.17 ↗ | alpha arrays › HTH › HTH › Cyclin-like › CycT2-like_C | 0.80 | 58.0 | 4.86e-01 | 76.1% | 47.6% |
| 3623358 | 101.1.10.14 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C_2 | 0.80 | 54.0 | 4.97e-01 | 74.6% | 55.3% |
| 5001330 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.80 | 55.0 | 4.53e-01 | 76.1% | 41.7% |
| 4033886 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.79 | 58.0 | 5.04e-01 | 79.1% | 52.0% |
| 2972075 | 3759.1.1.1 ↗ | alpha arrays › Antitermination protein Q helical domain › Antitermination protein Q helical domain › Antitermination protein Q helical domain › Antiterm | 0.79 | 63.0 | 6.17e-01 | 91.0% | 80.3% |
| 3283105 | 191.1.1.48 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_46 | 0.78 | 71.0 | 5.58e-01 | 100.0% | 50.4% |
| 3278820 | 191.1.1.48 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_46 | 0.78 | 69.0 | 5.65e-01 | 98.5% | 58.3% |
| 4964463 | 3896.1.1.2 ↗ | alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase › DUF92 | 0.73 | 54.0 | 3.77e-01 | 86.6% | 24.1% |
| 4629067 | 633.24.1.5 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › PF29080 | 0.73 | 56.0 | 5.22e-01 | 94.0% | 65.9% |
| 4964111 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.72 | 61.0 | 5.15e-01 | 91.0% | 84.8% |
| 3732633 | 5051.1.1.3 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SSF | 0.71 | 59.0 | 3.47e-01 | 94.0% | 46.6% |
| 3398929 | 5041.1.1.32 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › TMEM141 | 0.71 | 55.0 | 4.98e-01 | 89.6% | 62.2% |
| 3279139 | 191.1.1.35 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_35 | 0.70 | 62.0 | 5.06e-01 | 100.0% | 56.0% |
| 3961309 | 191.1.1.48 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_46 | 0.70 | 61.0 | 5.02e-01 | 100.0% | 54.4% |
| 3786413 | 5051.1.1.3 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SSF | 0.69 | 57.0 | 3.35e-01 | 94.0% | 44.6% |
| 4031085 | 3826.1.1.79 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › DUF1024 | 0.68 | 50.0 | 4.79e-01 | 86.6% | 67.9% |
| 3500715 | 633.24.1.2 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601 | 0.68 | 52.0 | 4.96e-01 | 94.0% | 70.0% |
| 4023307 | 183.1.1.0 ↗ | alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain | 0.68 | 53.0 | 5.14e-01 | 98.5% | 76.0% |
| 3590532 | 1075.1.2.13 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › CNNM | 0.67 | 57.0 | 4.29e-01 | 95.5% | 64.2% |
| 3913300 | 3755.3.1.303 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF21A_4th | 0.66 | 44.0 | 3.40e-01 | 71.6% | 30.7% |
| 5079354 | 101.1.2.927 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7347 | 0.66 | 51.0 | 3.45e-01 | 85.1% | 41.6% |
| 4996484 | 7064.1.1.1 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › VIT1 | 0.64 | 47.0 | 3.58e-01 | 85.1% | 33.1% |
| 4944233 | 3718.1.1.0 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT | 0.64 | 43.0 | 4.28e-01 | 77.6% | 67.1% |
| 4139865 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.63 | 47.0 | 3.23e-01 | 80.6% | 22.1% |
| 3735463 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.62 | 52.0 | 4.64e-01 | 89.6% | 92.2% |
| 4472949 | 101.11.1.0 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 | 0.62 | 48.0 | 4.44e-01 | 88.1% | 65.9% |
| 5012500 | 3843.1.1.6 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › MrpF_PhaF | 0.61 | 44.0 | 4.04e-01 | 77.6% | 58.8% |
| 3601717 | 524.1.1.0 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p | 0.61 | 44.0 | 3.12e-01 | 80.6% | 23.9% |
| 4991390 | 5058.1.1.16 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 | 0.61 | 46.0 | 4.10e-01 | 85.1% | 55.8% |
| 4056158 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.61 | 40.0 | 3.36e-01 | 73.1% | 40.0% |
| 3738950 | 604.38.1.5 ↗ | alpha bundles › Spectrin repeat-like › Legionella effector SdeA 3-helical bundle › Legionella effector SdeA 3-helical bundle › TMD_POM152 | 0.60 | 47.0 | 4.27e-01 | 100.0% | 63.2% |
| 4944477 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 44.0 | 3.21e-01 | 80.6% | 28.6% |
| 3712624 | 604.12.1.46 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DGF-1_C | 0.59 | 43.0 | 4.09e-01 | 77.6% | 65.0% |
| 3286008 | 5050.1.1.52 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › CNNM | 0.59 | 46.0 | 3.63e-01 | 91.0% | 64.8% |
| 5045531 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.58 | 43.0 | 3.97e-01 | 79.1% | 61.2% |
| 3215295 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.58 | 45.0 | 4.27e-01 | 86.6% | 70.0% |
| 3822 | 604.4.1.1 ↗ | alpha bundles › Spectrin repeat-like › Alpha-hemoglobin stabilizing protein AHSP › Alpha-hemoglobin stabilizing protein AHSP › AHSP | 0.58 | 45.0 | 4.18e-01 | 94.0% | 65.6% |
| 3636033 | 192.15.1.101 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Choline_transpo | 0.57 | 48.0 | 3.01e-01 | 98.5% | 60.2% |
| 4953697 | 3843.1.1.6 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › MrpF_PhaF | 0.57 | 40.0 | 3.90e-01 | 79.1% | 65.3% |
| 4943027 | 7064.1.1.1 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › VIT1 | 0.57 | 47.0 | 3.69e-01 | 94.0% | 78.7% |
| 4930533 | 3843.1.1.6 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › MrpF_PhaF | 0.57 | 39.0 | 3.77e-01 | 76.1% | 61.3% |
| 3468013 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.57 | 45.0 | 3.94e-01 | 98.5% | 57.0% |
| 4241107 | 101.1.2.90 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_9 | 0.57 | 49.0 | 3.41e-01 | 98.5% | 40.0% |
| 4030915 | 3563.1.1.1 ↗ | alpha bundles › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › TatC | 0.57 | 43.0 | 3.14e-01 | 92.5% | 27.0% |
| 3875442 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.57 | 43.0 | 3.87e-01 | 82.1% | 76.8% |
| 5004790 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.56 | 44.0 | 4.01e-01 | 97.0% | 64.4% |
| 3284192 | 3563.1.1.1 ↗ | alpha bundles › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › TatC | 0.56 | 48.0 | 3.30e-01 | 100.0% | 27.6% |
| 3401272 | 174.1.1.29 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF4728 | 0.56 | 45.0 | 3.42e-01 | 100.0% | 35.9% |
| 4987541 | 611.8.1.0 ↗ | alpha bundles › N-cbl like › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 | 0.55 | 38.0 | 3.30e-01 | 74.6% | 43.6% |
| 4928705 | 212.1.1.22 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Topo-VIb_trans | 0.54 | 45.0 | 3.25e-01 | 95.5% | 59.0% |
| 3980245 | 5050.1.1.10 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_2 | 0.52 | 41.0 | 3.06e-01 | 97.0% | 88.2% |