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SR-VP_2-4_scaffold_141_2952615_prodigal-single.1__X__X__00082
Bact-VirSR-VP_2-4_scaffold_141_2952615_prodigal-single.1__X__X__00082
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-104
Domain cluster:
rep: GWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00571__D3-97
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3eb8B01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.67 | 32.0 | 4.02e-01 | 99.0% | 73.8% |
| 2i06A01 | 3.50.14.10 | Alpha Beta › 3-Layer(bba) Sandwich › Replication Terminator Protein (Tus); Chain A, domain 1 › Replication terminator Tus, domain 1 superfamily/Replication terminator Tus | 0.54 | 39.0 | 3.01e-01 | 74.0% | 88.3% |
| 1h54A03 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.54 | 30.0 | 3.49e-01 | 94.0% | 74.3% |
| 1xa6A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.52 | 31.0 | 3.06e-01 | 100.0% | 54.8% |
| 3ossC00 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 28.0 | 3.41e-01 | 88.0% | 84.6% |
| 7bwfA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.51 | 33.0 | 3.47e-01 | 98.0% | 73.6% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3420734 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.60 | 42.0 | 3.26e-01 | 73.0% | 56.6% |
| 4000199 | 3794.1.1.3 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › ACCA_BT | 0.57 | 34.0 | 3.73e-01 | 74.0% | 72.5% |
| 3205626 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 43.0 | 3.36e-01 | 100.0% | 38.6% |
| 4994722 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.54 | 41.0 | 2.78e-01 | 100.0% | 21.9% |
| 3726485 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.54 | 47.0 | 3.05e-01 | 98.0% | 71.0% |
| 4122483 | 4018.1.1.1 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › FBPase | 0.54 | 36.0 | 3.20e-01 | 70.0% | 50.3% |
| 3465990 | 5.1.4.404 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_IP5PC_F | 0.53 | 39.0 | 2.74e-01 | 100.0% | 23.9% |
| 4330494 | 5.1.3.19 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira | 0.52 | 47.0 | 3.51e-01 | 100.0% | 82.4% |
| 3279724 | 3794.1.1.0 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit | 0.52 | 37.0 | 3.44e-01 | 74.0% | 96.9% |
| 3797457 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.52 | 41.0 | 2.93e-01 | 100.0% | 28.1% |
| 4203230 | 5.1.3.19 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira | 0.52 | 46.0 | 3.75e-01 | 98.0% | 100.0% |
| 3709300 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 44.0 | 2.65e-01 | 96.0% | 15.8% |
| 3326962 | 3794.1.1.3 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › ACCA_BT | 0.51 | 36.0 | 3.31e-01 | 74.0% | 91.1% |