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SR-VP_2-4_scaffold_141_2952615_prodigal-single.1__X__X__00143
Bact-VirSR-VP_2-4_scaffold_141_2952615_prodigal-single.1__X__X__00143
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-213
Domain cluster:
rep: hypothetical_protein_psal_cds_310__YP_008436986__Pandoravirus_salinus__1349410__D56-163_204-331
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2acaA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.82 | 65.0 | 7.14e-01 | 93.3% | 98.3% |
| 2eenA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.79 | 65.0 | 7.08e-01 | 93.3% | 100.0% |
| 7emfR01 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.77 | 61.0 | 6.67e-01 | 81.4% | 100.0% |
| 2hzmB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.75 | 66.0 | 6.44e-01 | 91.9% | 95.6% |
| 3c0tA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.75 | 63.0 | 6.52e-01 | 88.1% | 100.0% |
| 4pn0C00 | 3.20.100.10 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like | 0.70 | 57.0 | 5.32e-01 | 84.3% | 85.5% |
| 4ckbD02 | 3.20.100.20 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › | 0.64 | 52.0 | 5.31e-01 | 84.3% | 90.7% |
| 3i4pA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.63 | 26.0 | 3.91e-01 | 88.6% | 90.5% |
| 1xszA03 | 3.30.310.140 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › sec7 domains | 0.61 | 37.0 | 4.19e-01 | 88.1% | 79.6% |
| 3bn7A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 30.0 | 4.11e-01 | 88.6% | 96.1% |
| 3tupA02 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.55 | 26.0 | 3.63e-01 | 86.7% | 94.8% |
| 1wnhA01 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 24.0 | 3.48e-01 | 77.1% | 92.0% |
| 5zc1D00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 23.0 | 3.26e-01 | 74.3% | 86.7% |
| 2ns9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 34.0 | 3.98e-01 | 84.3% | 94.6% |
| 2pcsA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 35.0 | 4.12e-01 | 88.1% | 99.3% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5035338 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.85 | 67.0 | 7.47e-01 | 91.0% | 99.4% |
| 5044050 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.84 | 65.0 | 7.28e-01 | 91.0% | 99.4% |
| 3388799 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.84 | 67.0 | 7.20e-01 | 91.4% | 93.5% |
| 4983274 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.84 | 68.0 | 7.44e-01 | 91.9% | 99.4% |
| 3937294 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.84 | 68.0 | 7.36e-01 | 93.3% | 97.2% |
| 3932045 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.83 | 67.0 | 7.24e-01 | 93.3% | 97.2% |
| 5042040 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.82 | 64.0 | 7.08e-01 | 93.3% | 98.8% |
| 5016100 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.81 | 69.0 | 7.33e-01 | 93.3% | 98.9% |
| 4946177 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.81 | 63.0 | 6.91e-01 | 91.4% | 96.0% |
| 4996503 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.79 | 68.0 | 7.21e-01 | 97.1% | 98.9% |
| 5052357 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.79 | 66.0 | 6.92e-01 | 94.8% | 95.3% |
| 4971308 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.79 | 62.0 | 6.53e-01 | 93.3% | 89.5% |
| 4996916 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.77 | 70.0 | 7.16e-01 | 95.2% | 98.5% |
| 3389726 | 868.1.1.5 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med18 | 0.76 | 65.0 | 6.63e-01 | 88.1% | 91.7% |
| 3886674 | 868.1.1.5 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med18 | 0.76 | 66.0 | 6.69e-01 | 92.9% | 91.3% |
| 3362111 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.75 | 60.0 | 6.22e-01 | 95.7% | 87.0% |
| 5029530 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.75 | 63.0 | 6.74e-01 | 93.3% | 99.5% |
| 1280917 | 868.1.1.5 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med18 | 0.75 | 63.0 | 6.52e-01 | 88.1% | 100.0% |
| 4214867 | 868.1.1.5 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med18 | 0.74 | 66.0 | 6.07e-01 | 92.9% | 100.0% |
| 3193902 | 868.1.1.5 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med18 | 0.74 | 65.0 | 5.93e-01 | 91.0% | 100.0% |
| 3255982 | 868.1.1.5 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med18 | 0.74 | 64.0 | 6.63e-01 | 90.5% | 94.0% |
| 3694694 | 868.1.1.5 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med18 | 0.74 | 66.0 | 6.32e-01 | 92.9% | 99.6% |
| 4524884 | 868.1.1.2 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase | 0.74 | 61.0 | 5.28e-01 | 84.8% | 76.4% |
| 3181662 | 868.1.1.2 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase | 0.74 | 61.0 | 5.23e-01 | 84.8% | 84.0% |
| 4063720 | 868.1.1.2 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase | 0.74 | 59.0 | 5.52e-01 | 82.9% | 87.8% |
| 4021159 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.74 | 65.0 | 6.35e-01 | 92.9% | 99.6% |
| 3196755 | 868.1.1.2 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase | 0.73 | 60.0 | 5.20e-01 | 84.8% | 84.8% |
| 3497119 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.73 | 66.0 | 6.22e-01 | 93.3% | 99.2% |
| 3788818 | 868.1.1.5 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med18 | 0.73 | 66.0 | 6.07e-01 | 94.3% | 99.6% |
| 4121982 | 868.1.1.5 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med18 | 0.73 | 64.0 | 6.25e-01 | 92.9% | 100.0% |
| 3600613 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.72 | 59.0 | 5.39e-01 | 84.8% | 88.5% |
| 3713781 | 868.1.1.9 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › RESC1_2 | 0.72 | 60.0 | 5.50e-01 | 86.2% | 90.6% |
| 3592631 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.72 | 59.0 | 5.15e-01 | 84.8% | 78.7% |
| 4956371 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.71 | 60.0 | 6.44e-01 | 93.3% | 99.5% |
| 3663192 | 868.1.1.11 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › DUF7903 | 0.71 | 52.0 | 5.33e-01 | 74.8% | 100.0% |
| 1406770 | 868.1.1.2 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase | 0.71 | 58.0 | 5.33e-01 | 84.3% | 85.4% |
| 3253396 | 868.1.1.2 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase | 0.71 | 57.0 | 5.85e-01 | 83.3% | 89.3% |
| 3677170 | 868.1.1.11 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › DUF7903 | 0.70 | 58.0 | 5.27e-01 | 86.2% | 89.2% |
| 3802153 | 868.1.1.11 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › DUF7903 | 0.68 | 54.0 | 5.14e-01 | 81.9% | 88.3% |
| 3602029 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.68 | 58.0 | 5.99e-01 | 95.2% | 95.9% |
| 4970968 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.67 | 35.0 | 4.71e-01 | 84.3% | 93.8% |
| 3729448 | 868.1.1.10 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › DUF7905 | 0.67 | 54.0 | 4.51e-01 | 84.3% | 77.1% |
| 3631881 | 868.1.1.10 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › DUF7905 | 0.65 | 54.0 | 4.63e-01 | 86.2% | 92.8% |
| 5074212 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.63 | 34.0 | 4.56e-01 | 83.3% | 98.2% |
| 3691461 | 868.1.1.3 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 | 0.63 | 55.0 | 5.13e-01 | 92.9% | 99.2% |
| 3614126 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.63 | 51.0 | 5.22e-01 | 86.7% | 86.8% |
| 3744119 | 868.1.1.3 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 | 0.60 | 52.0 | 5.42e-01 | 95.7% | 100.0% |
| 3249804 | 868.1.1.3 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 | 0.60 | 52.0 | 5.42e-01 | 93.3% | 100.0% |
| 2648443 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.55 | 24.0 | 3.61e-01 | 76.2% | 93.5% |
| 3074009 | 9.1.1.31 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › VtrC | 0.53 | 26.0 | 3.21e-01 | 75.7% | 72.2% |