←Back to structures
SR-VP_2-4_scaffold_141_2952615_prodigal-single.1__X__X__00179
Bact-VirSR-VP_2-4_scaffold_141_2952615_prodigal-single.1__X__X__00179
Identity
- Kingdom:
- phage
Quality
73.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-72_87-126
Domain cluster:
representative
CATH (53)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3w1eA01 | 3.30.1660.40 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › FlgT, N-terminal domain | 0.82 | 71.0 | 6.73e-01 | 91.1% | 98.9% |
| 4kzsA01 | 3.10.28.20 | Alpha Beta › Roll › Endonuclease I-creI › Acetamidase/Formamidase-like domains | 0.79 | 64.0 | 6.63e-01 | 84.8% | 97.3% |
| 2vxaA00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.72 | 56.0 | 6.01e-01 | 93.7% | 98.5% |
| 4evuB00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.70 | 47.0 | 4.96e-01 | 86.1% | 79.4% |
| 2fpoC00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.70 | 39.0 | 2.97e-01 | 88.6% | 24.3% |
| 4hvzA01 | 3.30.110.170 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Protein of unknown function (DUF541), domain 1 | 0.69 | 60.0 | 5.48e-01 | 94.9% | 100.0% |
| 2wcrB00 | 3.10.129.140 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Helicobacter TNF-alpha-Inducing protein | 0.68 | 55.0 | 4.58e-01 | 91.1% | 82.9% |
| 3ibwA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.66 | 44.0 | 4.46e-01 | 96.2% | 68.4% |
| 2nwaA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.64 | 43.0 | 4.44e-01 | 87.3% | 73.3% |
| 2f4lA03 | 3.10.28.20 | Alpha Beta › Roll › Endonuclease I-creI › Acetamidase/Formamidase-like domains | 0.64 | 50.0 | 5.03e-01 | 87.3% | 83.7% |
| 2qrrA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 44.0 | 4.13e-01 | 96.2% | 59.8% |
| 3eeeA00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.63 | 45.0 | 3.38e-01 | 92.4% | 31.4% |
| 3ayhB01 | 3.30.1490.120 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain | 0.63 | 54.0 | 5.49e-01 | 96.2% | 98.7% |
| 3qkbA00 | 3.30.110.70 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B | 0.62 | 54.0 | 5.10e-01 | 96.2% | 86.2% |
| 2bddA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.61 | 52.0 | 4.50e-01 | 96.2% | 97.6% |
| 1j5uA01 | 3.55.10.10 | Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain | 0.60 | 48.0 | 4.27e-01 | 87.3% | 100.0% |
| 1vr4E00 | 3.30.110.70 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B | 0.60 | 51.0 | 4.91e-01 | 94.9% | 86.0% |
| 1go3E02 | 3.30.1490.120 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain | 0.60 | 51.0 | 5.13e-01 | 98.7% | 93.8% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.60 | 42.0 | 3.51e-01 | 81.0% | 41.9% |
| 2jnaA01 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.60 | 42.0 | 4.43e-01 | 88.6% | 84.1% |
| 3pcoB06 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.59 | 46.0 | 4.36e-01 | 94.9% | 71.3% |
| 4nnzA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.58 | 41.0 | 3.07e-01 | 73.4% | 71.2% |
| 2b3zA02 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.58 | 41.0 | 2.94e-01 | 87.3% | 25.8% |
| 3vsjA00 | 3.40.830.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like | 0.57 | 47.0 | 3.22e-01 | 88.6% | 100.0% |
| 1cl7I00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 39.0 | 3.95e-01 | 93.7% | 69.5% |
| 1b7yB06 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.57 | 42.0 | 4.11e-01 | 97.5% | 72.1% |
| 3u2gA02 | 2.60.98.40 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › DU1608 C-terminal domain | 0.57 | 48.0 | 4.10e-01 | 93.7% | 84.5% |
| 3fbqA02 | 2.60.40.1640 | Mainly Beta › Sandwich › Immunoglobulin-like › Conserved domain protein. | 0.56 | 42.0 | 3.53e-01 | 92.4% | 46.0% |
| 7d58G01 | 3.30.1490.120 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain | 0.55 | 46.0 | 4.69e-01 | 94.9% | 100.0% |
| 5xoyB02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 47.0 | 4.21e-01 | 92.4% | 80.4% |
| 1go4A00 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.55 | 41.0 | 3.08e-01 | 79.7% | 96.9% |
| 4l82A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 45.0 | 3.59e-01 | 89.9% | 62.2% |
| 5jgjA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 40.0 | 2.90e-01 | 78.5% | 99.6% |
| 3c19A01 | 3.30.70.1380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transcriptional regulatory protein pf0864 domain like | 0.54 | 38.0 | 3.61e-01 | 94.9% | 59.6% |
| 3tupA02 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.54 | 43.0 | 4.10e-01 | 94.9% | 72.9% |
| 3cb0D00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 44.0 | 3.52e-01 | 89.9% | 62.7% |
| 3f8uD03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 41.0 | 3.78e-01 | 96.2% | 62.3% |
| 2d69B01 | 3.30.70.150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain | 0.54 | 43.0 | 3.76e-01 | 93.7% | 55.6% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 47.0 | 3.87e-01 | 100.0% | 93.9% |
| 1dn0D02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.66e-01 | 92.4% | 63.8% |
| 3qwuA03 | 3.30.70.2160 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 45.0 | 3.72e-01 | 92.4% | 76.3% |
| 6nifA01 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.53 | 39.0 | 2.96e-01 | 79.7% | 61.3% |
| 2y3uA02 | 3.30.980.50 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › | 0.53 | 47.0 | 4.16e-01 | 98.7% | 92.9% |
| 2q7aA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 36.0 | 3.03e-01 | 89.9% | 37.5% |
| 2mklC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 37.0 | 3.45e-01 | 89.9% | 58.1% |
| 1o51A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 37.0 | 3.61e-01 | 97.5% | 68.5% |
| 1jg5A00 | 3.30.1410.10 | Alpha Beta › 2-Layer Sandwich › Gtp Cyclohydrolase I Feedback Regulatory Protein; Chain: K › GTP cyclohydrolase I feedback regulatory protein GFRP | 0.52 | 40.0 | 4.01e-01 | 87.3% | 100.0% |
| 2e7vA01 | 3.30.70.960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SEA domain | 0.51 | 44.0 | 4.02e-01 | 94.9% | 79.0% |
| 4q9bA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 36.0 | 3.39e-01 | 92.4% | 58.4% |
| 2edmA00 | 2.60.40.2770 | Mainly Beta › Sandwich › Immunoglobulin-like › WSSV envelope protein-like | 0.51 | 43.0 | 3.50e-01 | 96.2% | 93.2% |
| 1qdlA00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.51 | 44.0 | 2.83e-01 | 100.0% | 59.5% |
| 3fz2A00 | 3.30.70.1700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U | 0.51 | 42.0 | 3.61e-01 | 91.1% | 59.4% |
| 3bzmA00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.50 | 42.0 | 2.75e-01 | 100.0% | 54.1% |
ECOD (77)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3838097 | 872.10.1.1 ↗ | a+b two layers › Dodecin subunit-like › Secreted protein HP1454 N-terminal domain › Secreted protein HP1454 N-terminal domain › LPP20 | 0.82 | 67.0 | 6.09e-01 | 84.8% | 85.0% |
| 3385894 | 872.9.1.0 ↗ | a+b two layers › Dodecin subunit-like › Flagella basal-body protein flgT N-terminal domain › Flagella basal-body protein flgT N-terminal domain | 0.81 | 70.0 | 6.54e-01 | 91.1% | 100.0% |
| 3979231 | 872.1.1.4 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › DUF4312 | 0.81 | 77.0 | 7.12e-01 | 100.0% | 92.6% |
| 3733530 | 304.133.1.0 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein | 0.72 | 66.0 | 6.31e-01 | 98.7% | 96.7% |
| 4940779 | 256.1.1.0 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like | 0.72 | 56.0 | 5.86e-01 | 94.9% | 94.3% |
| 4996918 | 3685.1.1.1 ↗ | a+b two layers › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › FmdA_AmdA | 0.71 | 55.0 | 5.47e-01 | 83.5% | 80.0% |
| 3690420 | 3685.1.1.1 ↗ | a+b two layers › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › FmdA_AmdA | 0.70 | 57.0 | 5.51e-01 | 87.3% | 76.7% |
| 4636747 | 256.1.1.1 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease | 0.70 | 54.0 | 5.67e-01 | 94.9% | 92.9% |
| 4973054 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.69 | 46.0 | 3.36e-01 | 93.7% | 26.0% |
| 3210445 | 3685.1.1.1 ↗ | a+b two layers › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › FmdA_AmdA | 0.69 | 56.0 | 5.17e-01 | 86.1% | 68.7% |
| 3270182 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 47.0 | 4.25e-01 | 96.2% | 52.4% |
| 4992379 | 304.133.1.1 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL | 0.69 | 59.0 | 6.09e-01 | 91.1% | 100.0% |
| 4212885 | 256.1.1.1 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease | 0.68 | 52.0 | 5.59e-01 | 94.9% | 98.5% |
| 4985331 | 256.1.1.1 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease | 0.68 | 52.0 | 5.35e-01 | 94.9% | 85.3% |
| 5013198 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.68 | 44.0 | 4.07e-01 | 96.2% | 52.0% |
| 4934429 | 256.1.1.1 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease | 0.67 | 51.0 | 5.57e-01 | 94.9% | 98.5% |
| 4968542 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.66 | 45.0 | 3.42e-01 | 94.9% | 30.3% |
| 3233779 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.65 | 48.0 | 3.56e-01 | 92.4% | 31.3% |
| 3222858 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.65 | 48.0 | 3.56e-01 | 92.4% | 31.3% |
| 7178 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.65 | 46.0 | 3.47e-01 | 92.4% | 31.4% |
| 4438073 | 304.18.1.0 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS | 0.64 | 45.0 | 4.48e-01 | 94.9% | 69.9% |
| 4569098 | 304.18.1.0 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS | 0.64 | 45.0 | 4.77e-01 | 93.7% | 85.3% |
| 3476029 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.63 | 46.0 | 3.46e-01 | 92.4% | 32.4% |
| 4024173 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.63 | 54.0 | 5.55e-01 | 97.5% | 100.0% |
| 4026228 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.63 | 54.0 | 5.59e-01 | 97.5% | 100.0% |
| 3501878 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.63 | 53.0 | 5.48e-01 | 98.7% | 100.0% |
| 143841 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.63 | 54.0 | 5.51e-01 | 96.2% | 100.0% |
| 5029745 | 304.133.1.1 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL | 0.62 | 54.0 | 5.47e-01 | 96.2% | 100.0% |
| 4194796 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.62 | 55.0 | 4.69e-01 | 97.5% | 82.4% |
| 3333647 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.62 | 53.0 | 5.41e-01 | 97.5% | 100.0% |
| 3577483 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.61 | 55.0 | 5.38e-01 | 98.7% | 94.1% |
| 3473979 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.61 | 48.0 | 3.55e-01 | 92.4% | 33.3% |
| 5049826 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.61 | 52.0 | 5.35e-01 | 98.7% | 100.0% |
| 4935852 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.61 | 52.0 | 5.37e-01 | 97.5% | 100.0% |
| 4930726 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.60 | 51.0 | 5.29e-01 | 98.7% | 100.0% |
| 3929328 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.60 | 51.0 | 5.26e-01 | 97.5% | 100.0% |
| 4956432 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.60 | 51.0 | 5.28e-01 | 97.5% | 100.0% |
| 3992388 | 872.3.1.5 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 | 0.60 | 52.0 | 4.49e-01 | 97.5% | 69.6% |
| 3202466 | 304.133.1.0 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein | 0.60 | 52.0 | 5.16e-01 | 98.7% | 98.8% |
| 3291711 | 11.12.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like | 0.59 | 45.0 | 3.40e-01 | 98.7% | 33.7% |
| 3247018 | 872.3.1.0 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like | 0.59 | 50.0 | 4.56e-01 | 96.2% | 75.5% |
| 3258030 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.59 | 50.0 | 5.16e-01 | 97.5% | 100.0% |
| 3915879 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.59 | 47.0 | 4.19e-01 | 93.7% | 61.8% |
| 4968745 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.59 | 49.0 | 5.07e-01 | 98.7% | 100.0% |
| 3492823 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.59 | 45.0 | 3.39e-01 | 92.4% | 34.2% |
| 3387512 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.59 | 51.0 | 4.48e-01 | 98.7% | 87.5% |
| 5035374 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.58 | 49.0 | 5.06e-01 | 98.7% | 100.0% |
| 3992387 | 872.3.1.0 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like | 0.58 | 47.0 | 4.87e-01 | 92.4% | 100.0% |
| 4110761 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.58 | 48.0 | 4.23e-01 | 92.4% | 90.8% |
| 4507345 | 304.18.1.0 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS | 0.58 | 44.0 | 4.44e-01 | 94.9% | 81.2% |
| 3484278 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.58 | 46.0 | 3.45e-01 | 92.4% | 34.9% |
| 4462681 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.58 | 52.0 | 3.71e-01 | 98.7% | 52.0% |
| 3706258 | 872.3.1.5 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 | 0.57 | 50.0 | 4.34e-01 | 98.7% | 85.6% |
| 4943376 | 304.10.1.3 ↗ | a+b two layers › Alpha-beta plaits › RuBisCO, large subunit, small (N-terminal) domain › RuBisCO, large subunit, small (N-terminal) domain › RuBisCO_large | 0.57 | 48.0 | 4.26e-01 | 93.7% | 66.1% |
| 3498135 | 872.3.1.5 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 | 0.57 | 48.0 | 4.46e-01 | 96.2% | 77.1% |
| 3906458 | 872.3.1.5 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 | 0.57 | 48.0 | 4.00e-01 | 97.5% | 83.3% |
| 4937631 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.56 | 47.0 | 4.86e-01 | 98.7% | 100.0% |
| 3402925 | 872.3.1.5 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 | 0.56 | 47.0 | 3.67e-01 | 93.7% | 69.1% |
| 4540145 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.56 | 47.0 | 4.18e-01 | 92.4% | 91.3% |
| 3709183 | 872.3.1.7 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_4 | 0.55 | 48.0 | 4.38e-01 | 100.0% | 71.8% |
| 3776086 | 306.10.1.5 ↗ | a+b two layers › Glucose permease domain IIB-like › H1 domain of KCTD12 › H1 domain of KCTD12 › PF31088 | 0.55 | 46.0 | 3.95e-01 | 93.7% | 91.5% |
| 3511773 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.55 | 46.0 | 4.21e-01 | 91.1% | 76.2% |
| 4027296 | 872.3.1.5 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 | 0.55 | 47.0 | 4.37e-01 | 98.7% | 76.2% |
| 3543605 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.55 | 47.0 | 4.13e-01 | 94.9% | 68.3% |
| 3993060 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.55 | 48.0 | 4.21e-01 | 98.7% | 69.2% |
| 3866917 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.54 | 47.0 | 4.00e-01 | 96.2% | 63.8% |
| 3525488 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.54 | 48.0 | 4.07e-01 | 100.0% | 60.8% |
| 3591566 | 304.31.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase | 0.54 | 45.0 | 4.18e-01 | 93.7% | 72.0% |
| 3753506 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.54 | 46.0 | 3.94e-01 | 96.2% | 62.3% |
| 3942344 | 2485.3.1.19 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › PF30928 | 0.53 | 44.0 | 3.01e-01 | 93.7% | 83.5% |
| 3621161 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.53 | 46.0 | 4.07e-01 | 98.7% | 69.2% |
| 3482574 | 872.3.1.0 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like | 0.53 | 46.0 | 4.12e-01 | 100.0% | 89.5% |
| 3499425 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.53 | 45.0 | 4.04e-01 | 94.9% | 78.9% |
| 3753559 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.52 | 44.0 | 3.79e-01 | 93.7% | 64.8% |
| 4884207 | 2485.3.1.7 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Major_capside | 0.51 | 44.0 | 3.07e-01 | 97.5% | 85.2% |
| 3411428 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.51 | 43.0 | 3.64e-01 | 93.7% | 60.0% |
| 3874532 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.51 | 42.0 | 3.76e-01 | 92.4% | 67.8% |
D2
high
residues 129-173