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SR-VP_2-4_scaffold_141_2952615_prodigal-single.1__X__X__00210
Bact-VirSR-VP_2-4_scaffold_141_2952615_prodigal-single.1__X__X__00210
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-72
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ruhA00 | 1.10.245.10 | Mainly Alpha › Orthogonal Bundle › MDM2 › SWIB/MDM2 domain | 0.60 | 49.0 | 3.88e-01 | 93.1% | 72.5% |
| 2iaiA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.56 | 38.0 | 3.72e-01 | 70.7% | 66.2% |
| 1rp3G02 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.55 | 38.0 | 2.99e-01 | 74.1% | 71.1% |
| 2ffwA00 | 4.10.830.40 | Few Secondary Structures › Irregular › 30s Ribosomal Protein S14; Chain N › | 0.54 | 41.0 | 3.77e-01 | 98.3% | 61.5% |
| 1wwiA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.51 | 39.0 | 3.07e-01 | 89.7% | 100.0% |
| 3dsqA01 | 1.10.287.540 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.51 | 35.0 | 3.46e-01 | 75.9% | 69.4% |
ECOD (1)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5009913 | 3624.1.1.0 ↗ | few secondary structure elements › CRISPR RNA silencing complex Cmr2 subunit Zn-binding domain › CRISPR RNA silencing complex Cmr2 subunit Zn-binding domain › CRISPR RNA silencing complex Cmr2 subunit Zn-binding domain | 0.66 | 47.0 | 5.01e-01 | 77.6% | 90.0% |