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SR-VP_2-4_scaffold_141_5652861_prodigal-single.1__X__X__00239

Bact-Vir

SR-VP_2-4_scaffold_141_5652861_prodigal-single.1__X__X__00239

Identity

Kingdom:
phage

Quality

66.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 33-109
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fgzA01 2.60.40.1130 Mainly Beta › Sandwich › Immunoglobulin-like › Rab geranylgeranyltransferase alpha-subunit, insert domain 0.55 40.0 3.53e-01 77.9% 67.0%
3vpbA02 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.54 33.0 3.51e-01 72.7% 69.6%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3817314 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.51 40.0 2.38e-01 92.2% 14.1%