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SR-VP_2-4_scaffold_141_5652861_prodigal-single.1__X__X__00241
Bact-VirSR-VP_2-4_scaffold_141_5652861_prodigal-single.1__X__X__00241
Identity
- Kingdom:
- phage
Quality
74.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-79
D2
high
residues 147-275
Domain cluster:
rep: NC_020158__YP_007378970.1__HVTV1-65__00064__D54-164
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10263.16 best | SprT-like | 53.0 | 3.90e-14 | 80.6% | 86.0% |
D3
high
residues 308-411
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2e6nA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 48.0 | 4.83e-01 | 74.0% | 75.0% |
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.59 | 41.0 | 3.90e-01 | 72.1% | 62.4% |
| 1wjqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 40.0 | 4.46e-01 | 70.2% | 98.7% |
| 2rhiA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 40.0 | 3.99e-01 | 73.1% | 84.8% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3261235 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.80 | 52.0 | 5.74e-01 | 70.2% | 81.2% |
| 3881119 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.78 | 48.0 | 5.38e-01 | 70.2% | 80.0% |
| 3765289 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.76 | 47.0 | 5.08e-01 | 70.2% | 72.2% |
| 3881117 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.76 | 50.0 | 5.16e-01 | 70.2% | 70.0% |
| 3765274 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 51.0 | 5.49e-01 | 70.2% | 80.0% |
| 3407854 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.76 | 48.0 | 4.99e-01 | 70.2% | 69.5% |
| 3938389 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.74 | 47.0 | 5.19e-01 | 70.2% | 78.8% |
| 4002896 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.74 | 47.0 | 5.08e-01 | 70.2% | 74.4% |
| 3547106 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.74 | 50.0 | 5.36e-01 | 70.2% | 80.0% |
| 3879064 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.74 | 48.0 | 5.11e-01 | 73.1% | 75.6% |
| 4317035 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.73 | 48.0 | 5.23e-01 | 70.2% | 81.2% |
| 3547084 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.73 | 48.0 | 5.12e-01 | 72.1% | 76.7% |
| 3881123 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.73 | 44.0 | 4.86e-01 | 70.2% | 74.1% |
| 3999723 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 50.0 | 4.41e-01 | 78.8% | 49.3% |
| 3920666 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.71 | 47.0 | 5.07e-01 | 73.1% | 77.8% |
| 3620905 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.70 | 48.0 | 5.15e-01 | 73.1% | 81.1% |
| 3881124 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.70 | 46.0 | 4.88e-01 | 73.1% | 76.7% |
| 3562168 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.68 | 44.0 | 4.74e-01 | 73.1% | 76.7% |
| 4018596 | 4.1.1.320 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_CYT4 | 0.66 | 47.0 | 4.85e-01 | 87.5% | 77.0% |
| 3637664 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.65 | 44.0 | 4.25e-01 | 70.2% | 93.3% |
| 3240406 | 4.1.1.347 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 | 0.64 | 44.0 | 4.28e-01 | 71.2% | 99.1% |
| 3893808 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.52 | 44.0 | 3.16e-01 | 93.3% | 57.2% |
| 5043132 | 4.15.1.2 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 | 0.50 | 36.0 | 3.90e-01 | 75.0% | 98.8% |