←Back to structures
SR-VP_2-4_scaffold_141_5652861_prodigal-single.1__X__X__00254
Bact-VirSR-VP_2-4_scaffold_141_5652861_prodigal-single.1__X__X__00254
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-147
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1o7dC02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.67 | 45.0 | 5.22e-01 | 100.0% | 95.5% |
| 4of8A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 43.0 | 4.65e-01 | 100.0% | 77.7% |
| 3of6E00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 41.0 | 4.38e-01 | 100.0% | 77.9% |
| 4frwA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 37.0 | 4.08e-01 | 100.0% | 76.0% |
| 2f8xC03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 35.0 | 3.96e-01 | 100.0% | 74.5% |
| 5t89X05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 40.0 | 4.18e-01 | 82.9% | 81.8% |
| 1nbeB01 | 3.30.70.140 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aspartate carbamoyltransferase regulatory subunit, N-terminal domain | 0.56 | 31.0 | 3.52e-01 | 94.3% | 69.9% |
| 3g8wB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 42.0 | 3.79e-01 | 87.0% | 59.1% |
| 3o3uN03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 38.0 | 3.95e-01 | 79.7% | 80.2% |
| 5gxxA02 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.54 | 44.0 | 4.04e-01 | 98.4% | 68.8% |
| 4ba8A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 37.0 | 4.07e-01 | 100.0% | 89.2% |
| 3hr6A02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 44.0 | 4.05e-01 | 98.4% | 70.7% |
| 2p3yA04 | 2.60.120.600 | Mainly Beta › Sandwich › Jelly Rolls › Domain of unknown function DUF1214, C-terminal domain | 0.50 | 40.0 | 3.54e-01 | 83.7% | 84.0% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3777298 | 2011.1.1.2 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M14,Pepdidase_M14_N | 0.58 | 50.0 | 3.32e-01 | 93.5% | 32.2% |
| 3288675 | 1.1.7.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding | 0.53 | 35.0 | 3.74e-01 | 100.0% | 76.4% |
| 5034488 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.52 | 41.0 | 4.06e-01 | 97.6% | 79.3% |
| 5029357 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.52 | 38.0 | 3.96e-01 | 77.2% | 84.3% |
| 3688711 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.51 | 36.0 | 3.76e-01 | 100.0% | 81.8% |
| 3595114 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.50 | 35.0 | 3.75e-01 | 100.0% | 82.9% |