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SR-VP_2-4_scaffold_141_5652861_prodigal-single.1__X__X__00275
Bact-VirSR-VP_2-4_scaffold_141_5652861_prodigal-single.1__X__X__00275
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-174
Domain cluster:
rep: ON464759.1__UTV60870.1__JDFnp1_82__00082__D31-221
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kw0A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.79 | 75.0 | 7.25e-01 | 100.0% | 93.7% |
| 2if6B00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.73 | 68.0 | 6.76e-01 | 98.3% | 99.4% |
| 6epkA02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.59 | 23.0 | 3.39e-01 | 91.9% | 81.7% |
| 1vw4M01 | 2.30.30.790 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 36.0 | 4.09e-01 | 92.4% | 82.6% |
| 2k4yA00 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.55 | 27.0 | 3.64e-01 | 97.7% | 90.7% |
| 4emoC00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 29.0 | 3.46e-01 | 93.6% | 76.7% |
| 3hrsA02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.51 | 24.0 | 3.41e-01 | 91.9% | 97.4% |
| 2da0A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 28.0 | 3.30e-01 | 96.5% | 78.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4009350 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.82 | 78.0 | 7.18e-01 | 99.4% | 96.2% |
| 3259022 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.81 | 77.0 | 7.26e-01 | 99.4% | 100.0% |
| 379641 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.80 | 76.0 | 7.26e-01 | 100.0% | 93.3% |
| 3388306 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.77 | 69.0 | 7.14e-01 | 96.5% | 99.4% |
| 3256028 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.77 | 72.0 | 6.65e-01 | 100.0% | 87.4% |
| 4028987 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.75 | 70.0 | 6.94e-01 | 98.8% | 97.8% |
| 3983612 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.75 | 69.0 | 6.86e-01 | 96.5% | 100.0% |
| 3979604 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.75 | 71.0 | 6.91e-01 | 98.8% | 98.9% |
| 7414 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.73 | 69.0 | 6.74e-01 | 98.3% | 98.4% |
| 3277734 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.69 | 65.0 | 6.08e-01 | 100.0% | 99.0% |
| 3410484 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.63 | 48.0 | 5.24e-01 | 83.1% | 93.1% |
| 1678740 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.50 | 24.0 | 3.31e-01 | 91.9% | 94.9% |