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SR-VP_4-6_scaffold_141_2201553_prodigal-single.1__X__X__00031
Bact-VirSR-VP_4-6_scaffold_141_2201553_prodigal-single.1__X__X__00031
Identity
- Kingdom:
- phage
Quality
85.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 706-781
Domain cluster:
representative
CATH (63)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zuvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.76 | 68.0 | 6.11e-01 | 100.0% | 84.0% |
| 4fkeA01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.71 | 63.0 | 4.52e-01 | 100.0% | 52.7% |
| 4l3aA03 | 2.60.40.3890 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.69 | 62.0 | 5.46e-01 | 100.0% | 92.0% |
| 5zi7A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.69 | 61.0 | 4.61e-01 | 100.0% | 44.3% |
| 2x9zA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.68 | 59.0 | 4.82e-01 | 100.0% | 65.8% |
| 6ea2A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.67 | 60.0 | 4.52e-01 | 100.0% | 44.4% |
| 1r17A02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.67 | 58.0 | 4.66e-01 | 100.0% | 85.4% |
| 8gsxA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 58.0 | 4.69e-01 | 100.0% | 79.5% |
| 3kptA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 57.0 | 4.76e-01 | 100.0% | 83.7% |
| 4kc3B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 55.0 | 5.13e-01 | 93.4% | 82.1% |
| 2vbkA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.66 | 55.0 | 3.37e-01 | 96.1% | 14.1% |
| 1i1rA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 53.0 | 4.86e-01 | 92.1% | 80.0% |
| 1rgxA02 | 2.60.40.4230 | Mainly Beta › Sandwich › Immunoglobulin-like › Resistin head domain | 0.64 | 46.0 | 4.91e-01 | 100.0% | 93.8% |
| 1z5hA01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.63 | 57.0 | 4.37e-01 | 100.0% | 62.9% |
| 1cgtA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 52.0 | 5.09e-01 | 93.4% | 83.7% |
| 4bhuA00 | 2.60.40.3490 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 55.0 | 4.68e-01 | 100.0% | 81.2% |
| 4b60A02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 53.0 | 4.37e-01 | 100.0% | 68.6% |
| 4psrA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.63 | 53.0 | 4.66e-01 | 98.7% | 68.9% |
| 4i0wD02 | 2.60.120.1290 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 54.0 | 4.60e-01 | 100.0% | 80.8% |
| 2w59B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 53.0 | 4.76e-01 | 100.0% | 85.1% |
| 4kncA02 | 2.60.120.1380 | Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module | 0.62 | 51.0 | 4.50e-01 | 94.7% | 94.9% |
| 4fo9A01 | 2.60.120.780 | Mainly Beta › Sandwich › Jelly Rolls › PINIT domain | 0.61 | 51.0 | 4.19e-01 | 94.7% | 88.9% |
| 2edmA00 | 2.60.40.2770 | Mainly Beta › Sandwich › Immunoglobulin-like › WSSV envelope protein-like | 0.61 | 52.0 | 4.16e-01 | 98.7% | 90.7% |
| 3oo2A01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.61 | 51.0 | 4.22e-01 | 97.4% | 78.0% |
| 1hx6A02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 52.0 | 4.31e-01 | 98.7% | 85.8% |
| 3l81A02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.61 | 53.0 | 4.74e-01 | 100.0% | 71.8% |
| 3cwiA00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.61 | 45.0 | 4.78e-01 | 86.8% | 89.7% |
| 3rpfC00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.60 | 45.0 | 4.66e-01 | 93.4% | 86.1% |
| 5ldaB00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.60 | 39.0 | 4.43e-01 | 94.7% | 91.2% |
| 1o7dC02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 50.0 | 4.81e-01 | 94.7% | 84.3% |
| 4v2bA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 52.0 | 4.72e-01 | 100.0% | 84.0% |
| 4devD01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 51.0 | 4.38e-01 | 97.4% | 66.4% |
| 5nn3A05 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.59 | 46.0 | 3.87e-01 | 85.5% | 53.8% |
| 1p8jA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 50.0 | 4.30e-01 | 100.0% | 77.3% |
| 5jipA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 49.0 | 4.70e-01 | 94.7% | 82.2% |
| 8ediA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 51.0 | 4.63e-01 | 100.0% | 89.4% |
| 4gx0B03 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.58 | 45.0 | 4.46e-01 | 100.0% | 82.1% |
| 4llfD02 | 2.60.40.4030 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 48.0 | 4.24e-01 | 96.1% | 90.8% |
| 2waaA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 49.0 | 4.26e-01 | 97.4% | 61.8% |
| 1fm0D00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.57 | 47.0 | 4.66e-01 | 93.4% | 86.4% |
| 1bvp102 | 2.60.120.170 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 47.0 | 4.02e-01 | 97.4% | 95.5% |
| 1ahsA00 | 2.60.120.170 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 47.0 | 4.06e-01 | 96.1% | 100.0% |
| 3qt2A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 46.0 | 4.29e-01 | 92.1% | 77.3% |
| 4cucA05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 46.0 | 4.06e-01 | 94.7% | 88.8% |
| 6mvfA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 48.0 | 3.92e-01 | 100.0% | 61.5% |
| 5uj6A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 47.0 | 3.88e-01 | 100.0% | 59.2% |
| 1m2vB02 | 2.60.40.1670 | Mainly Beta › Sandwich › Immunoglobulin-like › beta-sandwich domain of Sec23/24 | 0.55 | 43.0 | 3.54e-01 | 92.1% | 83.5% |
| 4cu7A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 46.0 | 3.64e-01 | 98.7% | 65.1% |
| 4jklA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 47.0 | 3.64e-01 | 100.0% | 61.5% |
| 3fn9A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 46.0 | 3.73e-01 | 100.0% | 57.2% |
| 4g65B02 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.54 | 42.0 | 3.99e-01 | 100.0% | 70.7% |
| 5dawA00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.54 | 47.0 | 3.20e-01 | 100.0% | 43.8% |
| 4aeeA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 45.0 | 4.21e-01 | 97.4% | 85.6% |
| 3efoB03 | 2.60.40.1670 | Mainly Beta › Sandwich › Immunoglobulin-like › beta-sandwich domain of Sec23/24 | 0.53 | 45.0 | 3.85e-01 | 100.0% | 65.0% |
| 3fn9C04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 44.0 | 4.24e-01 | 97.4% | 80.4% |
| 2xu9A03 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.53 | 46.0 | 3.93e-01 | 100.0% | 65.6% |
| 1bihA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 46.0 | 4.40e-01 | 100.0% | 89.8% |
| 4ktpA01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.52 | 44.0 | 3.18e-01 | 97.4% | 41.6% |
| 5jmfA02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 44.0 | 3.09e-01 | 97.4% | 36.5% |
| 4lejA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 44.0 | 3.50e-01 | 100.0% | 48.9% |
| 2je8A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 43.0 | 3.33e-01 | 100.0% | 64.6% |
| 6qe7A01 | 3.90.182.10 | Alpha Beta › Alpha-Beta Complex › Toxin - Anthrax Protective Antigen; domain 1 › Toxin - Anthrax Protective Antigen;domain 1 | 0.51 | 42.0 | 3.59e-01 | 97.4% | 54.4% |
| 1cb8A02 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.50 | 42.0 | 3.04e-01 | 97.4% | 94.3% |
ECOD (90)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3580349 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.78 | 72.0 | 6.65e-01 | 100.0% | 94.7% |
| 5030166 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.73 | 64.0 | 6.04e-01 | 96.1% | 87.8% |
| 5033016 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.72 | 56.0 | 5.56e-01 | 94.7% | 81.2% |
| 5068346 | 11.1.1.33 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arch_flagellin | 0.71 | 60.0 | 5.50e-01 | 92.1% | 90.0% |
| 3264398 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.71 | 57.0 | 5.39e-01 | 86.8% | 86.7% |
| 1097258 | 11.1.1.342 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › InlK_D2 | 0.70 | 61.0 | 5.12e-01 | 96.1% | 90.8% |
| 4988646 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 59.0 | 5.56e-01 | 90.8% | 90.0% |
| 5033579 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 60.0 | 5.12e-01 | 94.7% | 75.0% |
| 5012858 | 11.1.1.33 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arch_flagellin | 0.69 | 60.0 | 4.93e-01 | 94.7% | 75.6% |
| 4937135 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.69 | 62.0 | 4.78e-01 | 100.0% | 47.6% |
| 4980201 | 11.1.1.33 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arch_flagellin | 0.69 | 59.0 | 5.10e-01 | 94.7% | 75.8% |
| 3272130 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 57.0 | 5.62e-01 | 90.8% | 88.7% |
| 2392511 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.68 | 61.0 | 4.53e-01 | 100.0% | 45.6% |
| 3258281 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 57.0 | 5.01e-01 | 93.4% | 62.7% |
| 3197931 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.68 | 56.0 | 4.68e-01 | 92.1% | 97.0% |
| 4956427 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 58.0 | 5.36e-01 | 93.4% | 92.6% |
| 3253275 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 58.0 | 5.65e-01 | 94.7% | 85.9% |
| 3625598 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 57.0 | 5.35e-01 | 93.4% | 87.4% |
| 3249110 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 56.0 | 5.54e-01 | 93.4% | 86.3% |
| 4955177 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.67 | 59.0 | 5.32e-01 | 100.0% | 78.1% |
| 3973010 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.67 | 59.0 | 4.44e-01 | 100.0% | 42.6% |
| 3258967 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 56.0 | 5.57e-01 | 93.4% | 90.0% |
| 3969203 | 4182.1.1.0 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like | 0.66 | 58.0 | 5.08e-01 | 98.7% | 73.9% |
| 5040224 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 59.0 | 5.46e-01 | 100.0% | 88.4% |
| 4944859 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 58.0 | 5.09e-01 | 100.0% | 86.1% |
| 3266837 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 54.0 | 5.09e-01 | 93.4% | 90.5% |
| 3270576 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.65 | 54.0 | 5.31e-01 | 90.8% | 86.3% |
| 3257466 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 55.0 | 5.05e-01 | 94.7% | 87.0% |
| 3272952 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 53.0 | 5.18e-01 | 93.4% | 87.1% |
| 3551087 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.64 | 54.0 | 5.05e-01 | 94.7% | 84.2% |
| 3901602 | 11.1.1.86 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Lep_receptor_Ig | 0.64 | 52.0 | 4.54e-01 | 90.8% | 65.0% |
| 4927137 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.64 | 52.0 | 4.91e-01 | 90.8% | 74.7% |
| 4451587 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 56.0 | 5.02e-01 | 100.0% | 88.2% |
| 3587122 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.64 | 55.0 | 4.67e-01 | 100.0% | 82.2% |
| 3027221 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 52.0 | 4.87e-01 | 90.8% | 87.2% |
| 4932638 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.63 | 55.0 | 4.59e-01 | 100.0% | 60.0% |
| 3557833 | 11.1.1.86 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Lep_receptor_Ig | 0.63 | 51.0 | 4.83e-01 | 90.8% | 85.3% |
| 3524821 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 48.0 | 4.76e-01 | 85.5% | 85.0% |
| 3552846 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 51.0 | 4.44e-01 | 92.1% | 64.2% |
| 3923826 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 51.0 | 4.77e-01 | 93.4% | 81.1% |
| 3971796 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 50.0 | 4.87e-01 | 90.8% | 84.7% |
| 3290895 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.61 | 52.0 | 4.48e-01 | 100.0% | 81.5% |
| 3548353 | 12.2.1.8 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › UPF0556 | 0.61 | 52.0 | 4.35e-01 | 97.4% | 59.3% |
| 3562774 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.60 | 52.0 | 4.21e-01 | 98.7% | 65.2% |
| 3392945 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 51.0 | 4.71e-01 | 100.0% | 85.7% |
| 3972567 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.60 | 52.0 | 4.98e-01 | 100.0% | 94.4% |
| 3797708 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 48.0 | 4.11e-01 | 90.8% | 58.5% |
| 2095620 | 4178.1.1.0 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain | 0.60 | 46.0 | 3.90e-01 | 85.5% | 53.4% |
| 3925579 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.60 | 52.0 | 4.26e-01 | 100.0% | 53.1% |
| 3551766 | 11.1.1.86 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Lep_receptor_Ig | 0.59 | 48.0 | 4.51e-01 | 90.8% | 83.2% |
| 3996132 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.59 | 51.0 | 4.89e-01 | 100.0% | 88.9% |
| 3928568 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.59 | 51.0 | 4.60e-01 | 100.0% | 71.8% |
| 3939464 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.59 | 51.0 | 3.69e-01 | 100.0% | 32.9% |
| 4018607 | 10.32.1.9 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glyco_hydro_2_N | 0.59 | 48.0 | 3.63e-01 | 92.1% | 82.6% |
| 3928569 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.59 | 51.0 | 4.53e-01 | 100.0% | 68.7% |
| 1681825 | 10.27.1.2 ↗ | beta sandwiches › jelly-roll › Polyhedrin › Polyhedrin › CPV_Polyhedrin | 0.59 | 51.0 | 3.61e-01 | 100.0% | 58.5% |
| 3870401 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.59 | 48.0 | 4.38e-01 | 93.4% | 87.6% |
| 3743265 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.59 | 50.0 | 4.30e-01 | 100.0% | 59.2% |
| 4954877 | 11.1.1.531 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF11 | 0.58 | 51.0 | 4.55e-01 | 100.0% | 85.5% |
| 5046044 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.58 | 49.0 | 4.29e-01 | 100.0% | 72.0% |
| 3884474 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.58 | 47.0 | 4.17e-01 | 96.1% | 97.6% |
| 3590148 | 11.1.5.53 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › GBS104-like_Ig | 0.57 | 49.0 | 3.71e-01 | 100.0% | 57.5% |
| 3260356 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 45.0 | 4.42e-01 | 93.4% | 81.2% |
| 4114688 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.56 | 47.0 | 4.18e-01 | 97.4% | 64.2% |
| 5083577 | 10.1.2.182 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Glyco_hydro_2_N | 0.56 | 48.0 | 3.72e-01 | 100.0% | 51.4% |
| 1714466 | 10.26.1.1 ↗ | beta sandwiches › jelly-roll › Histone H3 binding protein ORF158L › Histone H3 binding protein ORF158L › Pox_C7_F8A | 0.56 | 48.0 | 3.95e-01 | 100.0% | 70.0% |
| 1208998 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 42.0 | 4.18e-01 | 89.5% | 78.3% |
| 4221261 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.55 | 47.0 | 4.06e-01 | 100.0% | 60.0% |
| 5037340 | 10.1.2.182 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Glyco_hydro_2_N | 0.55 | 48.0 | 3.82e-01 | 100.0% | 59.4% |
| 3361921 | 10.32.1.88 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glyco_hydro_2_N2 | 0.55 | 48.0 | 3.57e-01 | 100.0% | 54.3% |
| 3188281 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 46.0 | 3.92e-01 | 100.0% | 56.4% |
| 3586343 | 10.32.1.9 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glyco_hydro_2_N | 0.55 | 47.0 | 3.51e-01 | 100.0% | 55.2% |
| 4946492 | 10.1.2.182 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Glyco_hydro_2_N | 0.55 | 47.0 | 3.58e-01 | 100.0% | 51.8% |
| 4337716 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.54 | 46.0 | 4.35e-01 | 100.0% | 79.6% |
| 1714465 | 10.26.1.1 ↗ | beta sandwiches › jelly-roll › Histone H3 binding protein ORF158L › Histone H3 binding protein ORF158L › Pox_C7_F8A | 0.54 | 47.0 | 3.86e-01 | 100.0% | 71.8% |
| 3224175 | 10.32.1.9 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glyco_hydro_2_N | 0.54 | 47.0 | 3.43e-01 | 100.0% | 53.8% |
| 3360663 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 47.0 | 3.71e-01 | 100.0% | 57.6% |
| 4914028 | 10.32.1.88 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glyco_hydro_2_N2 | 0.54 | 45.0 | 3.55e-01 | 100.0% | 62.2% |
| 5038824 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 43.0 | 4.24e-01 | 93.4% | 98.8% |
| 3609473 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.54 | 46.0 | 3.74e-01 | 100.0% | 70.3% |
| 3671864 | 10.32.1.76 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_gal-bd | 0.53 | 46.0 | 4.20e-01 | 100.0% | 78.1% |
| 2396498 | 10.32.1.88 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glyco_hydro_2_N2 | 0.53 | 46.0 | 3.44e-01 | 100.0% | 62.8% |
| 2806726 | 10.26.1.1 ↗ | beta sandwiches › jelly-roll › Histone H3 binding protein ORF158L › Histone H3 binding protein ORF158L › Pox_C7_F8A | 0.53 | 46.0 | 3.72e-01 | 100.0% | 66.0% |
| 4889137 | 10.32.1.88 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glyco_hydro_2_N2 | 0.53 | 45.0 | 3.51e-01 | 100.0% | 62.7% |
| 3728675 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 44.0 | 3.97e-01 | 93.4% | 72.4% |
| 3301067 | 10.32.1.38 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like | 0.53 | 43.0 | 3.58e-01 | 94.7% | 56.7% |
| 5017304 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 45.0 | 4.05e-01 | 100.0% | 77.3% |
| 5055590 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 43.0 | 3.83e-01 | 96.1% | 63.3% |
| 3363323 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 44.0 | 3.49e-01 | 100.0% | 55.6% |
| 5014961 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.51 | 43.0 | 4.07e-01 | 98.7% | 83.2% |
D2
high
residues 1600-1728
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bi3A01 | 3.90.1720.80 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.61 | 38.0 | 4.37e-01 | 71.3% | 86.8% |
| 3uebF00 | 3.30.300.100 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like | 0.60 | 34.0 | 3.86e-01 | 96.9% | 73.0% |
| 4p25D01 | 2.40.510.10 | Mainly Beta › Beta Barrel › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Positive stranded ssRNA viruses | 0.55 | 40.0 | 3.51e-01 | 74.4% | 97.4% |
| 1v7wA01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.53 | 41.0 | 3.12e-01 | 82.2% | 82.5% |
| 2sliA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 37.0 | 3.32e-01 | 77.5% | 98.5% |
| 4bwiB01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.50 | 44.0 | 3.93e-01 | 98.4% | 89.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4060488 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.72 | 44.0 | 5.48e-01 | 70.5% | 100.0% |
| 4660673 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.70 | 45.0 | 5.46e-01 | 74.4% | 100.0% |
| 4028468 | 1.1.7.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH | 0.67 | 48.0 | 5.29e-01 | 74.4% | 95.2% |
| 3575535 | 1.1.7.113 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AAA_11, AAA_12 | 0.64 | 48.0 | 3.28e-01 | 77.5% | 27.3% |
| 4066146 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 44.0 | 4.81e-01 | 79.1% | 90.5% |
| 4519252 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.59 | 41.0 | 4.33e-01 | 71.3% | 100.0% |
| 3949068 | 1.1.7.88 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 | 0.59 | 42.0 | 4.10e-01 | 73.6% | 92.9% |
| 4665957 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.55 | 30.0 | 3.27e-01 | 94.6% | 61.9% |
| 4992026 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.54 | 31.0 | 3.51e-01 | 95.3% | 73.5% |
| 3619352 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 40.0 | 3.75e-01 | 82.2% | 100.0% |
| 1101 | 10.1.1.18 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Sialidase | 0.51 | 37.0 | 3.32e-01 | 77.5% | 98.5% |
| 3882820 | 5067.1.1.3 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Patched | 0.51 | 39.0 | 2.37e-01 | 81.4% | 84.6% |
D3
medium
residues 94-188
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4amwA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 53.0 | 4.54e-01 | 96.8% | 62.2% |
| 7x0fA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.59 | 47.0 | 4.05e-01 | 86.3% | 84.5% |
| 1a10I00 | 3.30.10.10 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A | 0.58 | 38.0 | 4.46e-01 | 72.6% | 100.0% |
| 1y9zA02 | 3.50.30.30 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › | 0.57 | 39.0 | 3.44e-01 | 70.5% | 100.0% |
| 7xkcA01 | 3.30.10.10 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A | 0.56 | 36.0 | 3.86e-01 | 72.6% | 75.3% |
| 3v0dA02 | 2.60.40.1110 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 42.0 | 3.65e-01 | 91.6% | 55.2% |
| 4bz4A00 | 2.60.120.1220 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 46.0 | 3.75e-01 | 100.0% | 94.0% |
| 1bwzA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.52 | 37.0 | 3.45e-01 | 76.8% | 82.7% |
| 3w0eA00 | 3.30.10.10 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A | 0.52 | 33.0 | 3.78e-01 | 75.8% | 91.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4932234 | 11.1.1.33 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arch_flagellin | 0.61 | 54.0 | 4.46e-01 | 100.0% | 74.9% |
| 1569631 | 4178.1.1.0 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain | 0.60 | 53.0 | 4.43e-01 | 96.8% | 57.5% |
| 4964309 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.58 | 43.0 | 4.72e-01 | 93.7% | 100.0% |
| 3763380 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.55 | 41.0 | 4.31e-01 | 88.4% | 88.2% |
| 3391527 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.55 | 40.0 | 3.64e-01 | 100.0% | 54.8% |
| 4933363 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.55 | 40.0 | 4.42e-01 | 97.9% | 100.0% |
D4
medium
residues 189-286
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5b6iA02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.62 | 53.0 | 5.23e-01 | 96.9% | 98.1% |
| 1q8mA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 53.0 | 5.00e-01 | 96.9% | 81.0% |
| 1cidA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 37.0 | 4.17e-01 | 90.8% | 85.9% |
| 4uzgA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 52.0 | 4.47e-01 | 98.0% | 75.0% |
| 2dlgA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 39.0 | 4.23e-01 | 87.8% | 82.5% |
| 2c9aA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 44.0 | 4.51e-01 | 99.0% | 83.5% |
| 3fkuS02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 48.0 | 4.81e-01 | 92.9% | 91.3% |
| 3shsA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 42.0 | 4.39e-01 | 100.0% | 85.2% |
| 3m4rA01 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.57 | 48.0 | 3.83e-01 | 92.9% | 92.5% |
| 2dmcA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 36.0 | 3.95e-01 | 80.6% | 82.4% |
| 2f4nB02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.56 | 47.0 | 4.77e-01 | 95.9% | 98.9% |
| 3oq3B03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 44.0 | 4.42e-01 | 98.0% | 84.5% |
| 4kq7A01 | 2.60.120.1390 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF2961 | 0.55 | 47.0 | 4.10e-01 | 98.0% | 65.4% |
| 4nn5C01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 37.0 | 3.92e-01 | 100.0% | 79.8% |
| 2p3yA04 | 2.60.120.600 | Mainly Beta › Sandwich › Jelly Rolls › Domain of unknown function DUF1214, C-terminal domain | 0.55 | 44.0 | 3.77e-01 | 90.8% | 97.1% |
| 3p3yA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 40.0 | 4.15e-01 | 98.0% | 85.6% |
| 2f68X02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 46.0 | 4.00e-01 | 98.0% | 65.4% |
| 1eerC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 4.13e-01 | 91.8% | 83.5% |
| 3wdhA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 37.0 | 3.80e-01 | 95.9% | 78.1% |
| 4mboA01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 43.0 | 3.78e-01 | 95.9% | 66.9% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.50 | 37.0 | 4.00e-01 | 99.0% | 100.0% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3847741 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 38.0 | 4.27e-01 | 87.8% | 82.9% |
| 3477530 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.61 | 51.0 | 5.02e-01 | 98.0% | 85.7% |
| 3283109 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.61 | 52.0 | 5.03e-01 | 94.9% | 93.6% |
| 3758150 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 46.0 | 4.98e-01 | 81.6% | 100.0% |
| 3845720 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 52.0 | 5.22e-01 | 100.0% | 96.0% |
| 3597326 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.58 | 42.0 | 4.35e-01 | 91.8% | 83.3% |
| 1176226 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.58 | 47.0 | 4.81e-01 | 96.9% | 95.7% |
| 3599696 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 41.0 | 4.30e-01 | 90.8% | 83.3% |
| 1221881 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.57 | 42.0 | 4.34e-01 | 85.7% | 85.9% |
| 3905573 | 11.1.1.135 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_Tie2_1 | 0.55 | 43.0 | 4.32e-01 | 96.9% | 85.0% |
| 3230802 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 41.0 | 4.17e-01 | 98.0% | 84.2% |
| 4108164 | 604.27.1.4 ↗ | alpha bundles › Spectrin repeat-like › Triple-helical domain in insecticidal protein Cry1Ac › Triple-helical domain in insecticidal protein Cry1Ac › Cry1Ac_D5 | 0.52 | 45.0 | 3.30e-01 | 99.0% | 65.1% |
| 3851567 | 11.1.1.334 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TSLPR_D1 | 0.52 | 39.0 | 4.00e-01 | 95.9% | 85.3% |
| 4237658 | 10.32.1.57 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Cry1Ac_D5 | 0.51 | 43.0 | 3.63e-01 | 100.0% | 96.3% |
| 4940386 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.51 | 37.0 | 3.86e-01 | 95.9% | 88.2% |
| 4096819 | 284.1.1.4 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › GreA_GreB | 0.50 | 35.0 | 3.67e-01 | 71.4% | 88.2% |
| 3617423 | 1.1.2.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N | 0.50 | 42.0 | 4.33e-01 | 93.9% | 98.9% |
| 4574360 | 11.1.1.540 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Peptidase_M66 | 0.50 | 43.0 | 4.11e-01 | 99.0% | 90.8% |
D5
medium
residues 412-539_1022-1053
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rikA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 30.0 | 3.78e-01 | 100.0% | 82.1% |
| 1tq5A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 28.0 | 3.37e-01 | 100.0% | 66.7% |
| 4igbB02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 40.0 | 4.25e-01 | 70.6% | 93.7% |
| 4oi4C01 | 2.60.120.1030 | Mainly Beta › Sandwich › Jelly Rolls › Clp1, DNA binding domain | 0.57 | 27.0 | 3.62e-01 | 100.0% | 83.3% |
| 6h4lA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 30.0 | 3.84e-01 | 80.6% | 85.4% |
| 3b43A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 31.0 | 3.79e-01 | 80.0% | 85.6% |
| 2dltA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 30.0 | 3.58e-01 | 83.7% | 77.4% |
| 2eo1A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 31.0 | 3.63e-01 | 87.5% | 83.3% |
| 5joeA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 29.0 | 3.61e-01 | 100.0% | 87.0% |
| 3lcyA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 29.0 | 3.51e-01 | 100.0% | 83.5% |
| 6bxuA02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.52 | 27.0 | 3.34e-01 | 100.0% | 81.1% |
| 1cs6A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 28.0 | 3.34e-01 | 100.0% | 77.1% |
| 5i99A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 27.0 | 3.40e-01 | 81.9% | 86.3% |
| 3t30C00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.50 | 30.0 | 3.76e-01 | 100.0% | 98.9% |
| 7wqxA01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.50 | 28.0 | 3.31e-01 | 81.2% | 79.2% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3646282 | 12.6.1.4 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Glyco_hydro127M | 0.63 | 30.0 | 3.48e-01 | 99.4% | 61.7% |
| 3899131 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.60 | 30.0 | 3.91e-01 | 100.0% | 87.1% |
| 4094461 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.59 | 29.0 | 3.10e-01 | 98.8% | 51.0% |
| 3568244 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.59 | 30.0 | 3.80e-01 | 100.0% | 82.1% |
| 1070070 | 11.1.5.52 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Sgo0707_N2 | 0.58 | 40.0 | 4.21e-01 | 70.0% | 91.2% |
| 3874075 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.58 | 29.0 | 3.68e-01 | 100.0% | 80.6% |
| 3742191 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.57 | 30.0 | 3.78e-01 | 82.5% | 83.2% |
| 3398480 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.57 | 28.0 | 3.56e-01 | 98.8% | 80.0% |
| 3875819 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.57 | 29.0 | 3.69e-01 | 100.0% | 82.1% |
| 3847830 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.57 | 28.0 | 3.58e-01 | 100.0% | 81.1% |
| 3874738 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.57 | 29.0 | 3.22e-01 | 100.0% | 60.0% |
| 3588730 | 4182.1.1.0 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like | 0.56 | 34.0 | 4.20e-01 | 83.1% | 98.9% |
| 4940606 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.55 | 33.0 | 3.68e-01 | 70.6% | 75.8% |
| 3899129 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.55 | 29.0 | 3.67e-01 | 100.0% | 87.8% |
| 4944855 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.54 | 31.0 | 4.02e-01 | 100.0% | 100.0% |
| 3774967 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.54 | 28.0 | 3.55e-01 | 78.1% | 85.6% |
| 3410859 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.53 | 29.0 | 3.50e-01 | 76.9% | 83.0% |
| 143140 | 11.1.5.38 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › SdrG_C_C | 0.53 | 34.0 | 3.32e-01 | 100.0% | 57.7% |
| 3556095 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.52 | 28.0 | 3.35e-01 | 100.0% | 78.0% |
| 3188281 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 33.0 | 3.52e-01 | 83.7% | 72.1% |
| 5042048 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.50 | 39.0 | 3.64e-01 | 91.9% | 64.7% |
D6
medium
residues 540-624
Domain cluster:
rep: SR-VP_2-4_scaffold_141_2548329_prodigal-single.1__X__X__00138__D61-144
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nv4A00 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.71 | 57.0 | 4.96e-01 | 87.1% | 97.7% |
| 3op1A02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.70 | 57.0 | 5.23e-01 | 88.2% | 99.1% |
| 3okxB00 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.70 | 55.0 | 4.58e-01 | 84.7% | 83.2% |
| 1v0fB03 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.68 | 54.0 | 5.43e-01 | 87.1% | 100.0% |
| 2hcjB02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.66 | 53.0 | 5.21e-01 | 88.2% | 95.7% |
| 3u28C00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.66 | 55.0 | 5.36e-01 | 90.6% | 90.2% |
| 8eq1A01 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.66 | 47.0 | 4.70e-01 | 75.3% | 100.0% |
| 1a3wB03 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.64 | 49.0 | 4.73e-01 | 82.4% | 94.8% |
| 3dohA01 | 2.60.40.2180 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 44.0 | 3.87e-01 | 77.6% | 80.7% |
| 6hrbB01 | 2.70.150.10 | Mainly Beta › Distorted Sandwich › Calcium-transporting ATPase, cytoplasmic transduction domain A › Calcium-transporting ATPase, cytoplasmic transduction domain A | 0.59 | 36.0 | 3.32e-01 | 85.9% | 45.0% |
| 2eqnA01 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.58 | 48.0 | 4.77e-01 | 91.8% | 98.9% |
| 1o75A04 | 2.60.40.1270 | Mainly Beta › Sandwich › Immunoglobulin-like › Penicillin-binding protein Tp47, domain D | 0.58 | 44.0 | 4.54e-01 | 88.2% | 86.6% |
| 3dtdD00 | 2.60.40.1880 | Mainly Beta › Sandwich › Immunoglobulin-like › Invasion associated locus B (IalB) protein | 0.57 | 42.0 | 3.59e-01 | 78.8% | 57.9% |
| 2g3mA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.57 | 39.0 | 3.85e-01 | 82.4% | 66.3% |
| 4odbA00 | 2.60.90.20 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain | 0.56 | 44.0 | 3.67e-01 | 88.2% | 64.8% |
| 3nkgA00 | 2.60.120.790 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 44.0 | 3.61e-01 | 88.2% | 83.5% |
| 2v4dE01 | 2.40.420.20 | Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › | 0.55 | 40.0 | 4.05e-01 | 76.5% | 82.1% |
| 1kkeA02 | 2.60.90.20 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain | 0.55 | 42.0 | 3.68e-01 | 85.9% | 70.2% |
| 1h7sA01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.55 | 44.0 | 3.47e-01 | 90.6% | 49.2% |
| 3hrpA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 42.0 | 4.09e-01 | 84.7% | 81.1% |
| 4lhsA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 44.0 | 3.71e-01 | 91.8% | 76.5% |
| 4kktA01 | 2.40.420.20 | Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › | 0.53 | 41.0 | 4.03e-01 | 85.9% | 79.2% |
| 2cdoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 43.0 | 3.79e-01 | 92.9% | 78.3% |
| 3lnnA01 | 2.40.420.20 | Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › | 0.53 | 38.0 | 3.80e-01 | 77.6% | 81.3% |
| 1r17A02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 41.0 | 3.47e-01 | 88.2% | 63.9% |
| 4fx5A01 | 2.60.40.3670 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 41.0 | 3.57e-01 | 88.2% | 54.2% |
| 3am2A02 | 2.60.120.1050 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 43.0 | 3.90e-01 | 90.6% | 88.0% |
| 1x8mA01 | 2.60.120.520 | Mainly Beta › Sandwich › Jelly Rolls › pectin degrading enzyme 5-keto 4- deoxyuronate isomerase, domain 1 | 0.52 | 42.0 | 3.74e-01 | 88.2% | 76.2% |
| 1tq5A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 42.0 | 3.96e-01 | 92.9% | 71.3% |
| 3zn6A02 | 2.60.40.3410 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 39.0 | 3.93e-01 | 83.5% | 98.9% |
| 4n0rA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 38.0 | 3.84e-01 | 77.6% | 81.2% |
| 1nqjB00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 40.0 | 3.71e-01 | 90.6% | 64.0% |
| 5xnrA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 41.0 | 3.67e-01 | 89.4% | 78.7% |
| 2hyxA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 41.0 | 3.62e-01 | 89.4% | 58.8% |
| 3cjiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 43.0 | 3.25e-01 | 97.6% | 73.5% |
| 2oa2A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 42.0 | 3.75e-01 | 90.6% | 71.9% |
| 6kwaA01 | 2.60.120.330 | Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain | 0.51 | 40.0 | 2.96e-01 | 97.6% | 29.7% |
| 1ohfA03 | 2.60.270.70 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › | 0.51 | 40.0 | 3.47e-01 | 88.2% | 95.7% |
| 4um8B02 | 2.60.40.1510 | Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 | 0.51 | 36.0 | 3.15e-01 | 95.3% | 46.8% |
| 2yfuA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 41.0 | 3.53e-01 | 90.6% | 60.0% |
| 1v70A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 41.0 | 3.87e-01 | 90.6% | 77.1% |
| 4xvhA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 41.0 | 3.85e-01 | 91.8% | 73.8% |
| 2ee2A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 37.0 | 3.74e-01 | 80.0% | 82.8% |
| 2ekjA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 39.0 | 3.73e-01 | 88.2% | 70.5% |
| 1wckA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 42.0 | 3.71e-01 | 96.5% | 99.3% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995824 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.78 | 59.0 | 6.27e-01 | 80.0% | 100.0% |
| 3964292 | 1.1.13.38 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_BR0599 | 0.77 | 67.0 | 6.15e-01 | 95.3% | 74.5% |
| 4217174 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.77 | 59.0 | 6.45e-01 | 87.1% | 100.0% |
| 3180314 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.76 | 59.0 | 5.98e-01 | 83.5% | 100.0% |
| 3973332 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.75 | 60.0 | 6.32e-01 | 85.9% | 96.0% |
| 3696719 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 57.0 | 5.09e-01 | 82.4% | 96.7% |
| 4026674 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.74 | 63.0 | 6.53e-01 | 92.9% | 100.0% |
| 3512272 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.73 | 57.0 | 6.07e-01 | 83.5% | 98.7% |
| 3969131 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.73 | 59.0 | 5.67e-01 | 85.9% | 100.0% |
| 3944437 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.72 | 61.0 | 6.26e-01 | 90.6% | 100.0% |
| 3597282 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.72 | 61.0 | 6.27e-01 | 91.8% | 100.0% |
| 3782195 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.72 | 61.0 | 6.17e-01 | 91.8% | 100.0% |
| 3291549 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.72 | 60.0 | 5.62e-01 | 91.8% | 97.1% |
| 3299532 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.71 | 61.0 | 5.58e-01 | 92.9% | 100.0% |
| 5033714 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.71 | 53.0 | 5.33e-01 | 78.8% | 100.0% |
| 3712506 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.71 | 62.0 | 6.24e-01 | 96.5% | 97.6% |
| 4943639 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 56.0 | 5.65e-01 | 88.2% | 100.0% |
| 4660673 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.69 | 58.0 | 5.89e-01 | 91.8% | 97.6% |
| 5053561 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 52.0 | 5.12e-01 | 80.0% | 98.9% |
| 3975132 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 58.0 | 5.76e-01 | 91.8% | 85.6% |
| 4938522 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 54.0 | 5.32e-01 | 84.7% | 97.8% |
| 4954736 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 51.0 | 5.12e-01 | 78.8% | 97.6% |
| 3976133 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 54.0 | 5.20e-01 | 84.7% | 92.6% |
| 3196339 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 59.0 | 5.13e-01 | 96.5% | 96.9% |
| 4441313 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 57.0 | 5.64e-01 | 92.9% | 100.0% |
| 5078307 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.67 | 52.0 | 5.51e-01 | 83.5% | 100.0% |
| 4954732 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.65 | 50.0 | 4.92e-01 | 81.2% | 96.7% |
| 3603040 | 301.7.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like | 0.65 | 54.0 | 5.10e-01 | 89.4% | 100.0% |
| 4083333 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.64 | 53.0 | 5.13e-01 | 90.6% | 94.7% |
| 4010630 | 2004.1.1.10 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab | 0.64 | 57.0 | 3.63e-01 | 100.0% | 26.0% |
| 4319764 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.62 | 51.0 | 4.68e-01 | 89.4% | 71.8% |
| 4381868 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.62 | 50.0 | 4.95e-01 | 90.6% | 97.8% |
| 4395520 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.61 | 52.0 | 5.06e-01 | 95.3% | 90.5% |
| 4163669 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.61 | 47.0 | 4.12e-01 | 91.8% | 54.6% |
| 3822638 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 47.0 | 4.27e-01 | 82.4% | 74.8% |
| 4194151 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.61 | 51.0 | 5.08e-01 | 94.1% | 93.3% |
| 3616480 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 46.0 | 4.53e-01 | 84.7% | 81.1% |
| 3549359 | 225.1.1.7 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_3 | 0.57 | 46.0 | 3.41e-01 | 90.6% | 44.7% |
| 3273842 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 44.0 | 4.44e-01 | 87.1% | 87.1% |
| 3626139 | 10.32.1.221 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25900 | 0.56 | 46.0 | 4.12e-01 | 95.3% | 65.0% |
| 3321967 | 225.1.1.7 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_3 | 0.55 | 44.0 | 3.37e-01 | 90.6% | 48.2% |
| 4056113 | 1.1.7.80 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RND-MFP_C | 0.55 | 40.0 | 3.79e-01 | 76.5% | 72.0% |
| 3580256 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 45.0 | 4.35e-01 | 92.9% | 85.3% |
| 5017373 | 11.4.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › DUF4352 | 0.54 | 43.0 | 3.84e-01 | 88.2% | 86.4% |
| 441034 | 3386.1.1.4 ↗ | beta sandwiches › gp9 C-terminal domain-like › gp9 C-terminal domain-related › gp9 C-terminal domain-related › T4_gp9_10_C | 0.53 | 45.0 | 4.05e-01 | 95.3% | 94.2% |
| 4004446 | 10.12.1.18 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › DUF386 | 0.53 | 44.0 | 3.69e-01 | 95.3% | 86.5% |
| 3799509 | 225.1.1.7 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_3 | 0.53 | 42.0 | 3.28e-01 | 91.8% | 49.5% |
| 4943430 | 225.1.1.39 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › DNA_mis_repair | 0.52 | 42.0 | 3.40e-01 | 91.8% | 56.2% |
| 4980801 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.52 | 40.0 | 3.85e-01 | 95.3% | 70.5% |
| 3936407 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 39.0 | 3.88e-01 | 81.2% | 83.3% |
| 3267687 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 42.0 | 3.77e-01 | 89.4% | 80.8% |
| 5039010 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.52 | 41.0 | 3.64e-01 | 88.2% | 79.2% |
| 5045052 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.52 | 41.0 | 3.84e-01 | 89.4% | 93.6% |
| 3572437 | 12.5.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5 | 0.51 | 44.0 | 3.68e-01 | 98.8% | 59.4% |
| 3710159 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.51 | 40.0 | 3.70e-01 | 88.2% | 66.4% |
| 2974343 | 10.32.1.209 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MGAT4A_C | 0.51 | 43.0 | 3.67e-01 | 95.3% | 55.9% |
| 4950458 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.51 | 40.0 | 3.68e-01 | 87.1% | 97.4% |
| 3827980 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.50 | 36.0 | 2.68e-01 | 75.3% | 30.2% |
| 3924473 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.50 | 40.0 | 3.19e-01 | 90.6% | 40.0% |
D7
medium
residues 636-705_782-800
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1pcfA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.63 | 30.0 | 3.41e-01 | 86.5% | 57.6% |
| 2tbvA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 45.0 | 3.17e-01 | 78.7% | 35.7% |
| 2xfaA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.59 | 48.0 | 4.16e-01 | 91.0% | 83.2% |
| 2mp4A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.59 | 47.0 | 3.94e-01 | 89.9% | 83.0% |
| 4llfD02 | 2.60.40.4030 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 45.0 | 4.12e-01 | 87.6% | 84.2% |
| 2a74A05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.56 | 39.0 | 3.74e-01 | 74.2% | 93.3% |
| 3l50A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.55 | 45.0 | 4.00e-01 | 91.0% | 79.4% |
| 1fyhB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 40.0 | 3.89e-01 | 79.8% | 96.1% |
| 2i51B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 44.0 | 3.46e-01 | 89.9% | 71.2% |
| 4wedA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.54 | 37.0 | 2.68e-01 | 70.8% | 58.7% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.54 | 37.0 | 3.15e-01 | 70.8% | 63.3% |
| 2re7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 43.0 | 3.89e-01 | 93.3% | 85.6% |
| 2wzpR01 | 2.30.300.20 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Phage tail base-plate attachment protein, domain D1/D2 | 0.53 | 45.0 | 3.57e-01 | 97.8% | 91.8% |
| 1dhnA00 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.53 | 40.0 | 3.65e-01 | 82.0% | 92.6% |
| 2cg8C01 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.52 | 39.0 | 3.60e-01 | 79.8% | 93.3% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3654028 | 2.1.1.241 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rsm22 | 0.57 | 35.0 | 3.99e-01 | 96.6% | 84.4% |
| 5018908 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.57 | 46.0 | 4.07e-01 | 89.9% | 78.5% |
| 3910044 | 11.1.1.21 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Tissue_fac | 0.56 | 39.0 | 3.79e-01 | 80.9% | 64.0% |
| 5013143 | 11.1.1.1418 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_14 | 0.55 | 42.0 | 4.15e-01 | 82.0% | 100.0% |
| 3863597 | 11.1.1.271 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_6 | 0.54 | 39.0 | 3.46e-01 | 80.9% | 51.5% |
| 4178433 | 7504.1.1.1 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Ham1p_like | 0.53 | 41.0 | 3.15e-01 | 85.4% | 68.0% |
| 3326287 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.53 | 36.0 | 3.35e-01 | 71.9% | 88.3% |
| 1723245 | 10.42.1.2 ↗ | beta sandwiches › jelly-roll › ssRNA positive-strand viruses coat protein P (projecting) domain › ssRNA positive-strand viruses coat protein P (projecting) domain › Coat_P | 0.52 | 45.0 | 4.14e-01 | 96.6% | 84.6% |
| 3932770 | 11.1.4.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › TTR-52 | 0.52 | 43.0 | 4.09e-01 | 93.3% | 80.9% |
| 3634241 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.52 | 32.0 | 3.37e-01 | 79.8% | 68.8% |
| 5053699 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.52 | 39.0 | 3.49e-01 | 79.8% | 89.6% |
| 3223224 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 35.0 | 3.49e-01 | 77.5% | 67.4% |
| 1680012 | 3425.2.1.0 ↗ | a+b three layers › Two-component system yycF/yycG regulatory protein yycH-like › YycH C-terminal domain › YycH C-terminal domain | 0.51 | 39.0 | 2.64e-01 | 82.0% | 90.5% |
| 3267956 | 11.1.1.1311 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28708 | 0.50 | 38.0 | 3.52e-01 | 82.0% | 96.7% |
D8
medium
residues 901-977
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1n08A00 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.66 | 47.0 | 3.76e-01 | 75.3% | 82.5% |
| 1ja1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.65 | 44.0 | 3.81e-01 | 71.4% | 65.6% |
| 1a1rA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.62 | 40.0 | 3.91e-01 | 70.1% | 60.0% |
| 2vpzA05 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.58 | 40.0 | 3.27e-01 | 74.0% | 57.9% |
| 3be3A00 | 2.30.30.320 | Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain | 0.54 | 37.0 | 3.74e-01 | 71.4% | 93.4% |
| 1ixdA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.53 | 37.0 | 3.41e-01 | 74.0% | 78.8% |
| 1lmiA00 | 2.60.40.1240 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 35.0 | 2.98e-01 | 70.1% | 45.8% |
| 3nrfA00 | 2.60.40.4110 | Mainly Beta › Sandwich › Immunoglobulin-like › Protein of unknown function DUF4354 | 0.51 | 34.0 | 3.19e-01 | 70.1% | 70.6% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4029023 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.69 | 49.0 | 4.37e-01 | 83.1% | 53.3% |
| 4403870 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.66 | 49.0 | 4.64e-01 | 80.5% | 65.3% |
| 3688604 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.65 | 51.0 | 4.64e-01 | 100.0% | 62.9% |
| 3599398 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.65 | 45.0 | 4.11e-01 | 71.4% | 55.0% |
| 127 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.63 | 45.0 | 4.05e-01 | 75.3% | 94.5% |
| 3848399 | 4.8.1.24 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_MORC2_6th | 0.61 | 41.0 | 4.30e-01 | 70.1% | 91.4% |
| 4979743 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.60 | 47.0 | 3.49e-01 | 85.7% | 95.1% |
| 3553413 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.59 | 40.0 | 3.91e-01 | 70.1% | 78.8% |
| 2527304 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.59 | 40.0 | 4.32e-01 | 70.1% | 96.7% |
| 3768116 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.58 | 40.0 | 2.89e-01 | 70.1% | 31.2% |
| 4012945 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 39.0 | 4.01e-01 | 70.1% | 97.3% |
| 3699284 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.56 | 43.0 | 3.05e-01 | 83.1% | 30.4% |
| 3595505 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.55 | 42.0 | 2.96e-01 | 83.1% | 34.5% |
| 5017301 | 1.1.15.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › DUF2341 | 0.54 | 37.0 | 3.89e-01 | 71.4% | 87.7% |
| 331968 | 4.1.1.55 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF1653 | 0.53 | 37.0 | 3.68e-01 | 71.4% | 91.0% |
| 2754181 | 7575.1.1.6 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C80 | 0.52 | 40.0 | 2.96e-01 | 83.1% | 93.8% |
| 4250193 | 4.1.1.78 ↗ | beta barrels › SH3 › SH3 › SH3 › TTD | 0.51 | 35.0 | 3.38e-01 | 71.4% | 78.9% |
| 4547406 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.51 | 35.0 | 3.54e-01 | 72.7% | 81.2% |
D9
medium
residues 1214-1251_1344-1365_1381-1423
Domain cluster:
representative
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wcoA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.61 | 39.0 | 3.82e-01 | 71.8% | 57.4% |
| 1rgxA02 | 2.60.40.4230 | Mainly Beta › Sandwich › Immunoglobulin-like › Resistin head domain | 0.61 | 36.0 | 4.19e-01 | 72.8% | 90.6% |
| 2f0cA02 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.61 | 42.0 | 4.22e-01 | 71.8% | 77.9% |
| 2zuvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 44.0 | 4.45e-01 | 79.6% | 88.7% |
| 5zi7A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.59 | 50.0 | 4.16e-01 | 94.2% | 83.2% |
| 6ea2A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.58 | 49.0 | 4.10e-01 | 94.2% | 84.0% |
| 2bseA00 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.58 | 41.0 | 4.09e-01 | 72.8% | 78.5% |
| 4kq7A01 | 2.60.120.1390 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF2961 | 0.58 | 41.0 | 3.57e-01 | 73.8% | 85.8% |
| 1h6eA02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.58 | 41.0 | 4.11e-01 | 73.8% | 74.3% |
| 1z5hA01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.58 | 48.0 | 4.15e-01 | 94.2% | 84.1% |
| 6z0jA03 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.56 | 37.0 | 3.59e-01 | 75.7% | 57.9% |
| 1ahsA00 | 2.60.120.170 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 39.0 | 3.68e-01 | 72.8% | 99.2% |
| 2zahA02 | 2.60.40.4030 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 38.0 | 3.59e-01 | 71.8% | 93.0% |
| 3afgA03 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 40.0 | 4.06e-01 | 77.7% | 99.0% |
| 1x9pA01 | 2.60.120.550 | Mainly Beta › Sandwich › Jelly Rolls › Penton protein; domain 1 | 0.54 | 38.0 | 3.30e-01 | 71.8% | 98.2% |
| 7cymA04 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.54 | 44.0 | 4.53e-01 | 87.4% | 93.8% |
| 5eqxA02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.54 | 46.0 | 4.67e-01 | 93.2% | 96.0% |
| 1l3wA02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.54 | 46.0 | 4.47e-01 | 93.2% | 91.1% |
| 3jqwC00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 38.0 | 3.67e-01 | 74.8% | 67.8% |
| 1r17A02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 44.0 | 3.88e-01 | 92.2% | 88.0% |
| 5cu1A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 38.0 | 3.11e-01 | 74.8% | 41.1% |
| 7sz8A03 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.53 | 43.0 | 4.45e-01 | 92.2% | 93.8% |
| 2pn5A10 | 2.60.40.690 | Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain | 0.53 | 44.0 | 3.96e-01 | 92.2% | 75.3% |
| 1t4wA00 | 2.60.40.720 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 41.0 | 3.42e-01 | 86.4% | 80.1% |
| 5i8dA01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.52 | 44.0 | 4.36e-01 | 93.2% | 89.3% |
| 4fx5A01 | 2.60.40.3670 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 40.0 | 3.67e-01 | 83.5% | 81.7% |
| 2waaA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 38.0 | 3.60e-01 | 75.7% | 95.1% |
| 4lhsA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 37.0 | 3.34e-01 | 74.8% | 96.6% |
| 8d40A02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.52 | 43.0 | 4.40e-01 | 91.3% | 92.9% |
| 3klkA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 42.0 | 3.85e-01 | 90.3% | 79.0% |
| 2zotC00 | 2.60.40.4060 | Mainly Beta › Sandwich › Immunoglobulin-like › Reeler domain | 0.52 | 38.0 | 3.52e-01 | 79.6% | 79.3% |
| 3ghmA03 | 2.60.120.830 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 36.0 | 3.33e-01 | 73.8% | 90.1% |
| 1opoA02 | 2.60.40.1780 | Mainly Beta › Sandwich › Immunoglobulin-like › Carmovirus coat protein | 0.51 | 35.0 | 3.59e-01 | 74.8% | 71.8% |
| 1gqgC02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 36.0 | 3.01e-01 | 74.8% | 46.6% |
| 2vmhA00 | 2.60.120.1060 | Mainly Beta › Sandwich › Jelly Rolls › NPCBM/NEW2 domain | 0.51 | 35.0 | 3.17e-01 | 71.8% | 99.3% |
| 4lr4A01 | 2.60.120.1420 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 36.0 | 3.08e-01 | 74.8% | 59.1% |
| 3g7dA03 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 36.0 | 3.47e-01 | 74.8% | 82.3% |
| 1wmdA02 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 37.0 | 3.62e-01 | 79.6% | 85.5% |
| 3nkgA00 | 2.60.120.790 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 37.0 | 3.22e-01 | 78.6% | 87.1% |
| 6mvfA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 37.0 | 3.34e-01 | 78.6% | 61.5% |
| 4ca9A00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.50 | 35.0 | 3.62e-01 | 73.8% | 93.9% |
| 3h7jA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 35.0 | 3.45e-01 | 71.8% | 71.8% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3978227 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.72 | 51.0 | 5.92e-01 | 72.8% | 100.0% |
| 3792868 | 11.1.5.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF7808 | 0.65 | 49.0 | 4.61e-01 | 79.6% | 93.5% |
| 3338010 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.63 | 43.0 | 4.94e-01 | 70.9% | 98.7% |
| 4978194 | 7072.1.1.0 ↗ | beta sandwiches › N-terminal half of TgpA periplasmic domain › N-terminal half of TgpA periplasmic domain › N-terminal half of TgpA periplasmic domain | 0.63 | 46.0 | 4.07e-01 | 76.7% | 54.0% |
| 5076974 | 12.1.1.34 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro38C2 | 0.61 | 42.0 | 4.48e-01 | 71.8% | 82.2% |
| 143140 | 11.1.5.38 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › SdrG_C_C | 0.60 | 45.0 | 3.81e-01 | 80.6% | 80.8% |
| 3714611 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.60 | 41.0 | 4.68e-01 | 73.8% | 98.7% |
| 3414212 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.60 | 42.0 | 4.08e-01 | 72.8% | 87.8% |
| 3170803 | 12.1.1.44 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_5_C | 0.58 | 39.0 | 4.08e-01 | 70.9% | 74.7% |
| 3703651 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.58 | 41.0 | 3.92e-01 | 74.8% | 96.0% |
| 3569095 | 11.1.5.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub | 0.58 | 42.0 | 4.01e-01 | 77.7% | 68.0% |
| 5081702 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.57 | 40.0 | 3.82e-01 | 71.8% | 83.3% |
| 4561470 | 11.1.5.85 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PFF1_C | 0.57 | 39.0 | 3.51e-01 | 76.7% | 50.3% |
| 5045152 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 39.0 | 3.70e-01 | 71.8% | 98.4% |
| 3893303 | 11.1.1.34 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Reeler | 0.56 | 40.0 | 3.66e-01 | 78.6% | 56.3% |
| 4993499 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.56 | 38.0 | 4.18e-01 | 75.7% | 90.0% |
| 3620756 | 12.1.1.34 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro38C2 | 0.56 | 39.0 | 3.95e-01 | 72.8% | 89.5% |
| 5056552 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.55 | 47.0 | 4.23e-01 | 96.1% | 75.9% |
| 5044775 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 38.0 | 3.83e-01 | 74.8% | 77.1% |
| 2542981 | 10.42.1.0 ↗ | beta sandwiches › jelly-roll › ssRNA positive-strand viruses coat protein P (projecting) domain › ssRNA positive-strand viruses coat protein P (projecting) domain | 0.54 | 37.0 | 3.53e-01 | 71.8% | 93.5% |
| 1158363 | 10.32.1.171 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › SsfX3_N | 0.53 | 38.0 | 3.38e-01 | 74.8% | 96.1% |
| 3479505 | 10.21.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 | 0.53 | 38.0 | 3.42e-01 | 77.7% | 83.2% |
| 3256415 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 37.0 | 3.81e-01 | 72.8% | 98.9% |
| 3187961 | 11.1.5.105 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF7077 | 0.53 | 44.0 | 4.15e-01 | 93.2% | 85.6% |
| 1723239 | 10.42.1.1 ↗ | beta sandwiches › jelly-roll › ssRNA positive-strand viruses coat protein P (projecting) domain › ssRNA positive-strand viruses coat protein P (projecting) domain › Carmo_coat_C | 0.53 | 36.0 | 3.62e-01 | 78.6% | 70.6% |
| 4826425 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 32.0 | 3.72e-01 | 75.7% | 90.0% |
| 3203718 | 11.1.5.105 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF7077 | 0.52 | 42.0 | 3.99e-01 | 90.3% | 88.0% |
| 5038824 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.51 | 35.0 | 3.74e-01 | 70.9% | 96.5% |
D10
medium
residues 1252-1343
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4b3fX02 | 2.40.30.270 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.74 | 60.0 | 5.90e-01 | 84.8% | 88.8% |
| 1vw3C01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.73 | 62.0 | 5.44e-01 | 90.2% | 73.3% |
| 4zciA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.73 | 61.0 | 5.88e-01 | 88.0% | 91.1% |
| 1xqbA01 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.71 | 58.0 | 5.45e-01 | 85.9% | 86.2% |
| 3cr8A01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.68 | 49.0 | 4.22e-01 | 75.0% | 76.6% |
| 6tdyD01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.68 | 51.0 | 5.58e-01 | 95.7% | 100.0% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.67 | 53.0 | 5.66e-01 | 96.7% | 100.0% |
| 4tkoB01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.63 | 56.0 | 5.64e-01 | 100.0% | 97.8% |
| 2qf4A01 | 2.40.10.340 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 1 | 0.62 | 48.0 | 5.09e-01 | 95.7% | 96.2% |
| 3kewA01 | 2.40.30.130 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.61 | 46.0 | 4.79e-01 | 85.9% | 89.3% |
| 4p0dA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 40.0 | 3.71e-01 | 88.0% | 54.8% |
| 4kbxA01 | 2.40.37.30 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › | 0.59 | 52.0 | 3.89e-01 | 100.0% | 39.3% |
| 1v0fB03 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.59 | 48.0 | 4.98e-01 | 89.1% | 100.0% |
| 2xzlA02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.58 | 46.0 | 4.90e-01 | 97.8% | 100.0% |
| 1ep3B01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 51.0 | 5.03e-01 | 97.8% | 100.0% |
| 2i45D00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 36.0 | 3.60e-01 | 98.9% | 58.6% |
| 4wz9A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.57 | 46.0 | 3.53e-01 | 100.0% | 37.4% |
| 1ok0A00 | 2.60.40.20 | Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-amylase inhibitor | 0.56 | 40.0 | 4.37e-01 | 85.9% | 93.2% |
| 6fwvA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 38.0 | 3.85e-01 | 89.1% | 71.1% |
| 1ea9C04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 36.0 | 3.80e-01 | 85.9% | 74.1% |
| 5b6iA02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.55 | 49.0 | 4.70e-01 | 100.0% | 94.4% |
| 1o7dC02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 42.0 | 4.27e-01 | 84.8% | 83.1% |
| 2r6fA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.54 | 36.0 | 4.04e-01 | 80.4% | 88.9% |
| 2l55A00 | 2.40.50.320 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF | 0.53 | 35.0 | 3.64e-01 | 100.0% | 74.4% |
| 3hqxA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 33.0 | 3.26e-01 | 100.0% | 55.2% |
| 4psrA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 44.0 | 4.05e-01 | 100.0% | 69.7% |
| 1ut9A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 4.03e-01 | 83.7% | 80.6% |
| 3nqhA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 47.0 | 4.17e-01 | 100.0% | 80.1% |
| 2xbzA00 | 2.60.40.2380 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 41.0 | 3.66e-01 | 100.0% | 59.1% |
| 2r6hA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 45.0 | 3.96e-01 | 98.9% | 100.0% |
| 1kkeA02 | 2.60.90.20 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain | 0.52 | 40.0 | 3.54e-01 | 84.8% | 68.1% |
| 1w0nA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 43.0 | 3.98e-01 | 100.0% | 70.8% |
| 1x5xA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 42.0 | 4.01e-01 | 91.3% | 76.1% |
| 2w3jA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 42.0 | 3.66e-01 | 100.0% | 59.9% |
| 1pk6C00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 43.0 | 3.86e-01 | 95.7% | 98.4% |
| 3wnoA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 42.0 | 3.77e-01 | 100.0% | 65.4% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4060574 | 1.1.7.70 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_GLAA-B_II | 0.81 | 58.0 | 6.42e-01 | 75.0% | 100.0% |
| 4211588 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.77 | 65.0 | 4.04e-01 | 90.2% | 29.0% |
| 3574784 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.76 | 68.0 | 6.31e-01 | 93.5% | 95.5% |
| 3268887 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.76 | 62.0 | 5.99e-01 | 84.8% | 91.0% |
| 4027241 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.76 | 63.0 | 5.17e-01 | 87.0% | 60.6% |
| 3226149 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 63.0 | 5.85e-01 | 92.4% | 96.5% |
| 4209058 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.73 | 59.0 | 5.79e-01 | 87.0% | 89.0% |
| 4162532 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.72 | 55.0 | 5.95e-01 | 97.8% | 98.7% |
| 3171334 | 1.1.7.102 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF28793 | 0.72 | 58.0 | 5.49e-01 | 87.0% | 99.1% |
| 5036802 | 205.1.1.1 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 | 0.71 | 53.0 | 4.59e-01 | 78.3% | 52.9% |
| 5031810 | 3613.1.1.0 ↗ | beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain | 0.69 | 52.0 | 5.80e-01 | 85.9% | 97.3% |
| 5056905 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.68 | 54.0 | 5.46e-01 | 83.7% | 100.0% |
| 3927951 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 57.0 | 5.52e-01 | 92.4% | 85.7% |
| 3968971 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.67 | 54.0 | 5.53e-01 | 88.0% | 100.0% |
| 3981111 | 1.1.7.89 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 | 0.67 | 55.0 | 4.66e-01 | 90.2% | 67.7% |
| 4327412 | 1.1.8.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › YgfZ_barrel | 0.66 | 47.0 | 4.98e-01 | 73.9% | 87.5% |
| 4946634 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 55.0 | 5.61e-01 | 100.0% | 92.2% |
| 4945639 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.66 | 46.0 | 4.64e-01 | 100.0% | 73.3% |
| 4933171 | 3613.1.1.0 ↗ | beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain | 0.64 | 51.0 | 4.81e-01 | 83.7% | 94.5% |
| 4563164 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.64 | 55.0 | 5.08e-01 | 100.0% | 73.9% |
| 109 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 52.0 | 5.09e-01 | 98.9% | 100.0% |
| 3172185 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 53.0 | 5.01e-01 | 100.0% | 85.5% |
| 4989772 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 44.0 | 4.58e-01 | 88.0% | 92.9% |
| 5040939 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.57 | 45.0 | 4.60e-01 | 100.0% | 87.8% |
| 4972682 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.57 | 45.0 | 4.31e-01 | 100.0% | 74.3% |
| 5045833 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 44.0 | 4.27e-01 | 100.0% | 75.2% |
| 5058689 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 46.0 | 4.54e-01 | 100.0% | 87.0% |
| 4934399 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 44.0 | 4.04e-01 | 100.0% | 67.5% |
| 4943023 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 44.0 | 3.97e-01 | 100.0% | 63.8% |
| 3936403 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 41.0 | 3.98e-01 | 83.7% | 87.6% |
| 3956786 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.54 | 37.0 | 3.49e-01 | 71.7% | 75.7% |
| 5068910 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 45.0 | 3.98e-01 | 100.0% | 63.0% |
| 4959959 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 44.0 | 4.28e-01 | 100.0% | 83.0% |
| 3923531 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.53 | 40.0 | 3.11e-01 | 83.7% | 34.5% |
| 4546057 | 10.32.1.12 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_6 | 0.52 | 42.0 | 3.80e-01 | 100.0% | 61.5% |
| 5047113 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.52 | 43.0 | 4.03e-01 | 100.0% | 72.2% |
| 3470280 | 11.1.1.161 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TPPII | 0.52 | 44.0 | 3.98e-01 | 100.0% | 68.8% |
| 4381116 | 11.1.1.154 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgE_dom_N_S | 0.51 | 43.0 | 3.52e-01 | 96.7% | 89.5% |
| 3936407 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 39.0 | 3.96e-01 | 85.9% | 83.3% |
| 3519700 | 11.1.1.835 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_Irg-7 | 0.51 | 38.0 | 3.68e-01 | 83.7% | 81.8% |