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SR-VP_4-6_scaffold_141_2201553_prodigal-single.1__X__X__00056
Bact-VirSR-VP_4-6_scaffold_141_2201553_prodigal-single.1__X__X__00056
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 35-178
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6nobA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.70 | 63.0 | 4.56e-01 | 95.8% | 61.3% |
| 4pj2A00 | 2.40.128.460 | Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme | 0.70 | 49.0 | 5.28e-01 | 70.8% | 90.1% |
| 4nehA01 | 2.130.10.130 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal | 0.65 | 61.0 | 4.36e-01 | 100.0% | 82.8% |
| 2b5lB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 58.0 | 4.16e-01 | 95.8% | 59.4% |
| 8gn6A01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.64 | 57.0 | 4.28e-01 | 97.2% | 68.3% |
| 3nvqA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 55.0 | 3.86e-01 | 96.5% | 72.7% |
| 4k3yC00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.59 | 52.0 | 3.90e-01 | 96.5% | 51.8% |
| 3nqzA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 33.0 | 4.06e-01 | 72.2% | 92.9% |
| 1inyA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.58 | 51.0 | 3.77e-01 | 97.2% | 68.6% |
| 4pofA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 29.0 | 3.40e-01 | 83.3% | 67.3% |
| 6n8pA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 52.0 | 3.83e-01 | 100.0% | 92.9% |
| 2y3vD00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.56 | 39.0 | 3.87e-01 | 71.5% | 89.0% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5058622 | 5.1.9.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › Propeller domain in ABC toxin B component | 0.68 | 60.0 | 4.91e-01 | 94.4% | 54.0% |
| 3484051 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.66 | 59.0 | 4.28e-01 | 95.1% | 51.6% |
| 3734097 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 58.0 | 4.16e-01 | 95.8% | 61.3% |
| 5037155 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 60.0 | 4.15e-01 | 100.0% | 77.3% |
| 3193261 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.64 | 58.0 | 4.19e-01 | 95.8% | 71.9% |
| None | — | 0.64 | 54.0 | 3.82e-01 | 95.8% | 31.6% | |
| 4945010 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.64 | 56.0 | 4.25e-01 | 94.4% | 62.1% |
| 3547225 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.63 | 56.0 | 3.87e-01 | 94.4% | 31.9% |
| 4947855 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.63 | 58.0 | 4.07e-01 | 100.0% | 74.1% |
| 3770717 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.63 | 55.0 | 4.17e-01 | 94.4% | 72.9% |
| 3938391 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.63 | 57.0 | 4.26e-01 | 96.5% | 71.5% |
| 3523657 | 5.1.4.18 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EPTP | 0.62 | 57.0 | 4.15e-01 | 100.0% | 77.9% |
| 3762363 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.62 | 54.0 | 3.59e-01 | 93.8% | 25.9% |
| 3849724 | 5.1.11.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › WD40 | 0.62 | 54.0 | 3.71e-01 | 93.8% | 30.2% |
| 3514599 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.62 | 57.0 | 3.99e-01 | 100.0% | 79.1% |
| 3625014 | 216.1.1.16 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Med27 | 0.61 | 37.0 | 3.56e-01 | 88.9% | 51.2% |
| 3207857 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 53.0 | 3.88e-01 | 95.8% | 51.7% |
| 3638345 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 53.0 | 3.77e-01 | 94.4% | 48.6% |
| 3792083 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 49.0 | 3.67e-01 | 94.4% | 36.8% |
| None | — | 0.59 | 53.0 | 3.50e-01 | 95.8% | 26.5% | |
| 3811762 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.59 | 52.0 | 4.00e-01 | 95.8% | 45.8% |
| 3826506 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.59 | 52.0 | 4.12e-01 | 94.4% | 71.6% |
| 4948015 | 2.1.1.358 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM | 0.59 | 30.0 | 3.44e-01 | 83.3% | 64.5% |
| 3740970 | 5.1.4.249 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_pof12 | 0.58 | 51.0 | 3.83e-01 | 95.8% | 39.1% |
| 5082734 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 29.0 | 3.20e-01 | 83.3% | 57.5% |
| 4979630 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 30.0 | 3.35e-01 | 84.0% | 62.6% |
| 3708351 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.57 | 51.0 | 3.89e-01 | 96.5% | 90.5% |
| 3843944 | 243.5.1.7 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › AKAP28 | 0.57 | 36.0 | 3.84e-01 | 86.8% | 72.0% |
| 3468401 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.57 | 36.0 | 4.29e-01 | 80.6% | 100.0% |
| 3788866 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.56 | 30.0 | 3.05e-01 | 84.0% | 52.1% |
| 3419997 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.56 | 40.0 | 4.46e-01 | 91.0% | 96.3% |
| 3212332 | 243.1.1.85 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26531 | 0.56 | 40.0 | 4.27e-01 | 74.3% | 96.2% |
| 4998035 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 22.0 | 3.45e-01 | 77.1% | 100.0% |
| 3816604 | 375.1.1.7 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C | 0.55 | 22.0 | 3.16e-01 | 90.3% | 78.5% |
| 3619496 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 51.0 | 3.69e-01 | 100.0% | 87.4% |
| 5048721 | 375.1.1.7 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C | 0.54 | 26.0 | 3.73e-01 | 85.4% | 100.0% |
| 3277627 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.53 | 38.0 | 4.28e-01 | 75.0% | 94.8% |
| 3958160 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.52 | 36.0 | 3.93e-01 | 71.5% | 95.0% |