←Back to structures
SR-VP_4-6_scaffold_141_2201553_prodigal-single.1__X__X__00125
Bact-VirSR-VP_4-6_scaffold_141_2201553_prodigal-single.1__X__X__00125
Identity
- Kingdom:
- phage
Quality
81.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 119-186
Domain cluster:
rep: rifoxyd1_full_scaffold_5_prodigal-single.1__X__X__00175__D96-187
D2
medium
residues 50-118
Domain cluster:
rep: IMGVR_UViG_3300028601_000785-3300028601-Ga0265295_100223635__D1-73
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4wzuA00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.64 | 46.0 | 2.84e-01 | 73.9% | 44.1% |
| 8eb0A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.61 | 47.0 | 4.38e-01 | 84.1% | 100.0% |
| 2d8yA01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.51 | 37.0 | 3.68e-01 | 79.7% | 87.5% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4013051 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.73 | 51.0 | 4.76e-01 | 72.5% | 58.8% |
| 4015300 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.72 | 50.0 | 4.62e-01 | 71.0% | 60.0% |
| 3539687 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.72 | 57.0 | 5.33e-01 | 85.5% | 100.0% |
| 3211179 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.69 | 54.0 | 5.03e-01 | 84.1% | 100.0% |
| 3666975 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.69 | 52.0 | 4.89e-01 | 81.2% | 100.0% |
| 3744636 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.68 | 54.0 | 4.90e-01 | 84.1% | 100.0% |
| 3203036 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.67 | 46.0 | 4.60e-01 | 71.0% | 71.8% |
| 3928741 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.67 | 54.0 | 5.01e-01 | 85.5% | 100.0% |
| 3358136 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.66 | 47.0 | 4.53e-01 | 75.4% | 100.0% |
| 4966035 | 376.1.3.98 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › DUF7562 | 0.59 | 40.0 | 4.26e-01 | 71.0% | 86.7% |
| 3472238 | 376.1.5.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › AN1-like Zinc finger › zf-AN1 | 0.56 | 33.0 | 4.04e-01 | 71.0% | 100.0% |
| 4670027 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.52 | 36.0 | 3.59e-01 | 73.9% | 70.0% |