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SR-VP_4-6_scaffold_141_2201553_prodigal-single.1__X__X__00155
Bact-VirSR-VP_4-6_scaffold_141_2201553_prodigal-single.1__X__X__00155
Identity
- Kingdom:
- phage
Quality
70.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 407-530
Domain cluster:
rep: LSDeep1_scaffold_42_prodigal-single.1__X__X__00473__D789-889
D2
medium
residues 24-64_122-181_254-301
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1sc6A03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 34.0 | 4.31e-01 | 73.8% | 100.0% |
| 2qswA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.56 | 34.0 | 4.26e-01 | 79.9% | 100.0% |
| 3i3lA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 48.0 | 3.44e-01 | 95.3% | 86.4% |
| 2qrrA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.52 | 34.0 | 4.08e-01 | 79.9% | 100.0% |
| 3e1tA02 | 3.30.9.100 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › | 0.52 | 40.0 | 3.89e-01 | 80.5% | 98.2% |
| 1lq9A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 37.0 | 4.17e-01 | 73.8% | 100.0% |
| 2jgbA01 | 3.30.760.10 | Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e | 0.51 | 39.0 | 3.79e-01 | 81.9% | 91.3% |
| 3udcA03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 29.0 | 3.61e-01 | 81.2% | 96.6% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4417915 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.64 | 39.0 | 4.86e-01 | 75.2% | 100.0% |
| 3387259 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.64 | 35.0 | 4.66e-01 | 73.8% | 100.0% |
| 4112759 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.63 | 42.0 | 4.99e-01 | 81.9% | 100.0% |
| 4611510 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.62 | 39.0 | 4.67e-01 | 70.5% | 96.8% |
| 3256920 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 39.0 | 4.25e-01 | 73.2% | 75.2% |
| 4502129 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.62 | 41.0 | 4.88e-01 | 82.6% | 100.0% |
| 4615209 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.62 | 39.0 | 4.77e-01 | 78.5% | 100.0% |
| 4065918 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.61 | 38.0 | 4.66e-01 | 77.2% | 100.0% |
| 4371656 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.61 | 39.0 | 4.71e-01 | 77.9% | 100.0% |
| 5047447 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.61 | 40.0 | 4.37e-01 | 78.5% | 80.8% |
| 4116290 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.60 | 40.0 | 4.78e-01 | 81.2% | 100.0% |
| 4662593 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.60 | 38.0 | 4.64e-01 | 77.9% | 100.0% |
| 4403911 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.60 | 40.0 | 4.73e-01 | 81.2% | 100.0% |
| 4187183 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.59 | 39.0 | 4.67e-01 | 81.2% | 100.0% |
| 4291007 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.59 | 38.0 | 4.57e-01 | 80.5% | 99.0% |
| 4364438 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.59 | 37.0 | 4.53e-01 | 79.9% | 100.0% |
| 4036271 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.58 | 38.0 | 4.55e-01 | 76.5% | 99.0% |
| 4432159 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.58 | 37.0 | 4.50e-01 | 74.5% | 100.0% |
| 3315331 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.58 | 30.0 | 3.93e-01 | 81.9% | 91.3% |
| 3510650 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.58 | 38.0 | 4.50e-01 | 77.9% | 98.0% |
| 3317095 | 304.9.1.122 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › bHLH-TF_ACT-like_plant | 0.58 | 29.0 | 3.98e-01 | 81.9% | 100.0% |
| 4064787 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.58 | 37.0 | 4.43e-01 | 80.5% | 100.0% |
| 4105300 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.57 | 36.0 | 4.44e-01 | 80.5% | 100.0% |
| 4049287 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.57 | 40.0 | 4.51e-01 | 81.2% | 96.4% |
| 4304504 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.57 | 38.0 | 4.44e-01 | 79.9% | 99.0% |
| 3357746 | 304.12.1.8 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › bHLH-TF_ACT-like_plant | 0.57 | 28.0 | 3.94e-01 | 80.5% | 100.0% |
| 4321703 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.57 | 36.0 | 4.37e-01 | 80.5% | 100.0% |
| 4274127 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.57 | 37.0 | 4.40e-01 | 77.2% | 99.0% |
| 4119510 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.56 | 37.0 | 4.38e-01 | 78.5% | 99.0% |
| 4196383 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.56 | 37.0 | 4.39e-01 | 80.5% | 100.0% |
| 4074612 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.55 | 35.0 | 4.27e-01 | 73.8% | 100.0% |
| 4087300 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.55 | 38.0 | 4.46e-01 | 82.6% | 100.0% |
| 4478722 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.54 | 37.0 | 4.34e-01 | 90.6% | 100.0% |
| 3826658 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 28.0 | 3.64e-01 | 79.9% | 88.2% |
| 3445191 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.54 | 27.0 | 3.68e-01 | 79.9% | 94.7% |
| 4249240 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.53 | 35.0 | 4.19e-01 | 80.5% | 100.0% |
| 4250299 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.53 | 36.0 | 4.23e-01 | 75.8% | 100.0% |
| 3952346 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.53 | 39.0 | 3.97e-01 | 85.9% | 77.9% |
| 3350908 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.51 | 36.0 | 2.97e-01 | 71.1% | 61.9% |
D3
medium
residues 65-121_182-253
Domain cluster:
rep: IMGVR_UViG_3300018080_003942-3300018080-Ga0180433_1000026911__D58-117_189-241
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qwyA01 | 2.40.50.290 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 23.0 | 3.15e-01 | 86.0% | 83.9% |
| 1wg4A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 29.0 | 3.57e-01 | 89.9% | 92.2% |
| 2cpjA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.50 | 30.0 | 3.31e-01 | 93.0% | 73.7% |