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SR-VP_4-6_scaffold_141_2201553_prodigal-single.1__X__X__00180

Bact-Vir

SR-VP_4-6_scaffold_141_2201553_prodigal-single.1__X__X__00180

Identity

Kingdom:
phage

Quality

77.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-136
PDB
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6u26A01 3.30.70.80 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 0.68 43.0 4.85e-01 86.1% 83.0%
1u0sA00 3.30.70.1110 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Histidine kinase CheA-like, P2 response regulator-binding domain 0.59 41.0 4.58e-01 85.2% 96.5%
3i4hX01 3.30.70.1890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 48.0 4.64e-01 87.8% 96.1%
3ce8A00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 40.0 4.43e-01 87.0% 89.9%
4e98C00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 41.0 4.35e-01 86.1% 81.0%
6gdxA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 41.0 4.30e-01 87.8% 79.4%
1wkiA01 3.90.1170.10 Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Ribosomal protein L16/L10 0.57 45.0 4.65e-01 85.2% 99.1%
4y6iA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 42.0 4.40e-01 87.8% 85.4%
1p1lA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 41.0 4.30e-01 87.0% 84.3%
5v7qT00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.55 36.0 3.83e-01 71.3% 76.5%
2bopA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.55 38.0 4.31e-01 87.8% 98.8%
2nrqA00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.54 40.0 3.86e-01 79.1% 93.4%
1vx7G00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.54 40.0 3.99e-01 79.1% 94.4%
2uuvB01 3.40.462.40 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidase, cap domain/gating helix 0.53 47.0 3.67e-01 100.0% 69.7%
2oo4A02 3.30.70.3310 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 44.0 4.48e-01 88.7% 95.5%
4za1C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 36.0 3.99e-01 87.0% 88.0%
1gx5A03 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.53 44.0 4.33e-01 93.0% 83.6%
4qclA02 3.30.70.2820 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 43.0 4.44e-01 88.7% 96.4%
1qlmA02 3.30.1030.10 Alpha Beta › 2-Layer Sandwich › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 0.52 37.0 3.12e-01 73.0% 61.1%
3u02A01 3.30.70.2200 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 43.0 4.09e-01 99.1% 73.6%
4lbhA00 3.30.70.1060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel 0.52 39.0 4.22e-01 87.0% 96.8%
2mq8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.52 40.0 4.12e-01 85.2% 84.8%
4fvmA02 3.30.70.2820 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 42.0 4.40e-01 87.8% 97.1%
4dn9B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 37.0 3.97e-01 85.2% 88.7%
4ufcA01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.51 41.0 3.01e-01 87.8% 65.9%
3l0gB01 3.90.1170.20 Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Quinolinate phosphoribosyl transferase, N-terminal domain 0.51 37.0 3.75e-01 84.3% 75.4%
ECOD (43)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3821948 304.17.1.1 a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG 0.74 68.0 6.14e-01 100.0% 77.4%
4034485 304.120.1.5 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmL_1st 0.71 38.0 4.68e-01 85.2% 84.3%
4031829 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.68 45.0 5.24e-01 84.3% 96.2%
3919711 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.68 52.0 4.05e-01 98.3% 39.1%
4525621 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.67 44.0 4.88e-01 84.3% 85.6%
4319385 304.17.1.1 a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG 0.65 59.0 5.81e-01 100.0% 92.0%
3058011 304.17.1.1 a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG 0.63 55.0 5.44e-01 93.9% 97.5%
3172533 304.9.1.159 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF29309 0.62 44.0 4.68e-01 86.1% 84.0%
3915011 389.1.1.7 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_CA 0.61 47.0 4.20e-01 91.3% 58.7%
4417693 325.1.5.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal protein L10e 0.60 46.0 4.61e-01 85.2% 80.0%
4025700 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.60 46.0 4.75e-01 87.8% 84.5%
3376944 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.60 49.0 5.09e-01 96.5% 96.2%
3966499 304.28.1.1 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › ACR_tran 0.59 43.0 4.41e-01 76.5% 99.1%
4991252 304.51.1.0 a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related 0.59 45.0 4.85e-01 86.1% 97.9%
4542176 4261.1.1.1 a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C 0.59 41.0 4.39e-01 74.8% 84.0%
3702503 304.114.1.0 a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.57 42.0 4.71e-01 82.6% 97.8%
3502221 304.9.1.93 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1, PF27577 0.57 44.0 4.22e-01 86.1% 71.5%
4976968 882.1.1.3 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal_L5_C 0.57 43.0 3.71e-01 80.0% 83.2%
4937786 304.5.1.3 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 0.57 41.0 4.36e-01 87.8% 86.0%
4629521 304.5.1.3 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 0.57 41.0 4.31e-01 87.0% 82.7%
5000967 304.5.1.3 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 0.57 41.0 4.31e-01 87.0% 82.9%
5060406 304.5.1.3 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 0.57 41.0 4.26e-01 87.8% 80.0%
3178013 304.9.1.103 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF26763 0.57 45.0 4.78e-01 88.7% 96.0%
5015958 304.5.1.3 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 0.56 41.0 4.31e-01 87.8% 83.7%
4957224 304.5.1.3 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 0.56 41.0 4.37e-01 87.8% 87.0%
4944847 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.56 41.0 4.27e-01 87.8% 82.7%
4928840 304.5.1.3 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 0.56 41.0 4.39e-01 87.8% 88.0%
4098707 304.159.1.1 a+b two layers › Alpha-beta plaits › Alpha-beta plait domain in NisB › Alpha-beta plait domain in NisB › Lant_dehydr_C 0.56 41.0 4.39e-01 87.8% 90.0%
5040667 304.5.1.3 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 0.56 41.0 4.28e-01 87.8% 84.5%
3179969 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.56 40.0 4.23e-01 84.3% 86.0%
3295182 11.1.1.808 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7036 0.55 44.0 4.34e-01 86.1% 84.8%
1312370 304.28.1.1 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › ACR_tran 0.54 44.0 4.46e-01 88.7% 88.6%
4959532 331.10.2.1 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc 0.54 43.0 4.32e-01 85.2% 96.5%
4933025 304.51.1.0 a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related 0.53 42.0 4.48e-01 85.2% 98.0%
3993833 229.1.1.0 a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.53 33.0 3.70e-01 81.7% 83.5%
3782802 304.15.1.0 a+b two layers › Alpha-beta plaits › Viral DNA-binding domain › Viral DNA-binding domain 0.52 41.0 3.54e-01 83.5% 63.9%
4463387 304.5.1.18 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › PrmA 0.52 44.0 4.57e-01 93.9% 100.0%
3823835 304.4.1.78 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF7036 0.52 41.0 4.26e-01 83.5% 99.0%
4575105 882.1.1.0 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 0.52 37.0 3.39e-01 73.9% 82.7%
4932262 304.43.1.3 a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725 › DUF555 0.51 42.0 4.24e-01 87.0% 92.2%
4952416 304.51.1.1 a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C 0.51 40.0 3.94e-01 83.5% 96.0%
3270302 304.6.1.1 a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C 0.51 45.0 3.46e-01 100.0% 45.7%
4022825 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.50 38.0 4.00e-01 87.8% 87.6%
D2 high residues 143-189
PDB
CATH (83)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.95 85.0 8.36e-01 100.0% 90.0%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.94 84.0 7.12e-01 100.0% 63.4%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.92 82.0 7.96e-01 100.0% 88.2%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.92 86.0 7.70e-01 100.0% 79.0%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.92 85.0 7.88e-01 100.0% 86.0%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.91 84.0 7.52e-01 100.0% 77.8%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.89 81.0 7.48e-01 100.0% 79.7%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.88 80.0 6.20e-01 100.0% 62.9%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.87 79.0 6.16e-01 100.0% 60.0%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.87 75.0 6.50e-01 100.0% 63.8%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.87 75.0 7.45e-01 100.0% 91.7%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.86 76.0 6.04e-01 100.0% 51.1%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.84 75.0 6.41e-01 100.0% 76.0%
1vwxM01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.83 74.0 6.07e-01 100.0% 55.3%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.83 73.0 7.05e-01 100.0% 86.5%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.83 74.0 6.19e-01 100.0% 69.6%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.83 71.0 7.16e-01 95.7% 100.0%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 72.0 6.72e-01 100.0% 93.2%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 70.0 5.99e-01 100.0% 61.6%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 70.0 6.33e-01 100.0% 85.9%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 72.0 7.11e-01 100.0% 98.0%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 70.0 6.61e-01 100.0% 82.1%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 68.0 6.15e-01 100.0% 70.3%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.79 71.0 6.34e-01 100.0% 72.3%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 71.0 6.57e-01 100.0% 81.4%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 67.0 5.99e-01 100.0% 86.6%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.77 69.0 6.59e-01 100.0% 87.0%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 67.0 6.46e-01 100.0% 96.2%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.76 61.0 6.24e-01 93.6% 91.3%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 66.0 5.98e-01 100.0% 73.0%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 65.0 5.88e-01 97.9% 73.8%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.73 62.0 5.61e-01 100.0% 79.1%
4f88102 3.90.1720.60 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.72 60.0 4.01e-01 100.0% 28.6%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 61.0 5.98e-01 100.0% 88.5%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 62.0 4.96e-01 100.0% 79.2%
2grgA01 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.71 57.0 4.72e-01 89.4% 97.6%
2c9oB02 2.40.50.360 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain 0.71 53.0 4.04e-01 83.0% 35.4%
1azpA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.70 56.0 5.17e-01 95.7% 78.8%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.69 52.0 4.69e-01 83.0% 65.7%
6j5tB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.69 50.0 3.80e-01 80.9% 91.7%
3rn5A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 51.0 4.18e-01 83.0% 44.6%
1u5kA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 51.0 4.32e-01 83.0% 56.1%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 52.0 4.80e-01 85.1% 75.4%
1g29102 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 49.0 4.98e-01 80.9% 82.2%
5upiA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.67 54.0 3.59e-01 89.4% 51.6%
4uoiC00 3.30.160.890 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Hepatitis C virus envelope glycoprotein E1, chain C 0.67 48.0 4.69e-01 74.5% 82.4%
1efpB00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.67 57.0 3.67e-01 100.0% 54.9%
1bbuA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 49.0 3.57e-01 83.0% 34.3%
4l2iB00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.66 55.0 3.52e-01 100.0% 50.6%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.66 53.0 4.25e-01 93.6% 52.0%
3eb8B01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.64 48.0 4.42e-01 89.4% 62.3%
4up7A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 53.0 3.70e-01 93.6% 67.8%
6l4qB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 47.0 3.49e-01 85.1% 38.5%
4g5aA00 2.60.40.3080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 42.0 3.37e-01 72.3% 76.8%
3ulbA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 48.0 4.21e-01 95.7% 79.5%
4fd0A01 2.60.40.3630 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 45.0 3.86e-01 80.9% 88.6%
2af5A01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.60 48.0 4.61e-01 97.9% 79.6%
1mknA00 2.20.60.10 Mainly Beta › Single Sheet › Heparin-binding Growth Factor, Midkine; Chain A › Pleiotrophin/Midkine, N-terminal domain 0.60 42.0 3.94e-01 74.5% 66.1%
3k8uA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.60 49.0 3.70e-01 100.0% 39.7%
2ffsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 46.0 3.35e-01 89.4% 31.7%
2e9wB05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 41.0 3.39e-01 74.5% 95.6%
2oz4A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 44.0 3.70e-01 83.0% 91.6%
2m7oA00 3.10.450.400 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Uncharacterised protein PF15513, DUF4651 0.58 43.0 3.93e-01 87.2% 71.4%
6iikB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.57 50.0 2.99e-01 100.0% 15.9%
5hn3A00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.57 39.0 2.46e-01 76.6% 54.5%
1xkiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 45.0 3.48e-01 100.0% 71.9%
5agvA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.55 43.0 3.30e-01 91.5% 86.3%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.55 42.0 3.36e-01 91.5% 78.8%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.55 38.0 3.27e-01 74.5% 97.8%
2xotA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 41.0 3.45e-01 85.1% 80.2%
2oq1A03 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.54 45.0 3.66e-01 100.0% 70.0%
2w4yA00 2.40.160.220 Mainly Beta › Beta Barrel › Porin › 0.54 43.0 3.34e-01 95.7% 50.8%
3e8vA00 2.60.40.1120 Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain 0.54 42.0 3.64e-01 91.5% 89.0%
4mb7A01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.53 42.0 3.33e-01 100.0% 69.0%
6yfiB01 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.52 39.0 2.95e-01 87.2% 43.0%
1p6pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 40.0 3.12e-01 91.5% 99.2%
1dwnA00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.52 41.0 3.16e-01 93.6% 44.1%
4e5xG00 2.60.40.3530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 39.0 3.19e-01 87.2% 70.7%
2r41A00 3.10.450.150 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein 0.51 39.0 3.28e-01 95.7% 71.8%
1tgjA00 2.10.90.10 Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines 0.51 41.0 3.18e-01 91.5% 75.0%
2vf9A00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.51 40.0 3.03e-01 93.6% 45.0%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 41.0 3.12e-01 100.0% 78.2%
2kd3A00 2.10.90.10 Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines 0.50 39.0 3.18e-01 87.2% 79.4%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3518287 4.1.1.347 beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 0.98 87.0 6.23e-01 100.0% 38.3%
4357819 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.97 88.0 7.47e-01 100.0% 64.3%
3821919 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.96 83.0 7.54e-01 100.0% 71.7%
4101502 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.96 90.0 8.57e-01 100.0% 87.0%
4660107 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.96 87.0 7.89e-01 100.0% 75.0%
3671986 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.96 87.0 7.38e-01 100.0% 64.3%
3651961 4.1.1.251 beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5 0.96 86.0 8.09e-01 100.0% 81.8%
4372288 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.96 86.0 7.83e-01 100.0% 75.0%
3684908 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.95 86.0 7.13e-01 100.0% 60.0%
3486328 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.95 86.0 7.76e-01 100.0% 75.0%
5042892 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.95 89.0 8.10e-01 100.0% 81.7%
3302817 4.1.1.362 beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2, KOW7_SPT5 0.95 85.0 6.24e-01 100.0% 41.3%
4177200 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.95 88.0 8.29e-01 100.0% 85.5%
3740753 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.95 85.0 7.46e-01 100.0% 69.2%
3675511 4.1.1.75 beta barrels › SH3 › SH3 › SH3 › NdhS 0.95 88.0 7.19e-01 100.0% 61.3%
4029093 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.94 84.0 5.64e-01 100.0% 29.0%
3169607 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.94 84.0 7.00e-01 100.0% 60.0%
164934 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.94 84.0 7.12e-01 100.0% 63.4%
3456496 4.1.1.75 beta barrels › SH3 › SH3 › SH3 › NdhS 0.94 87.0 6.32e-01 100.0% 42.6%
3581896 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.94 87.0 7.68e-01 100.0% 72.3%
4078120 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.93 88.0 8.27e-01 100.0% 92.7%
4098445 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.93 83.0 7.56e-01 100.0% 75.0%
4024914 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.93 81.0 7.41e-01 97.9% 73.3%
3781710 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.93 88.0 7.14e-01 100.0% 63.7%
3660923 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.93 83.0 7.12e-01 100.0% 64.3%
4883808 148.1.3.202 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › KOW5_SPT5 0.93 83.0 8.01e-01 100.0% 86.5%
4200330 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.93 86.0 6.06e-01 100.0% 36.8%
4121981 4.1.1.325 beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.93 88.0 6.19e-01 100.0% 38.4%
4946028 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.93 86.0 6.72e-01 100.0% 63.3%
959119 4.1.1.75 beta barrels › SH3 › SH3 › SH3 › NdhS 0.93 86.0 8.16e-01 100.0% 90.7%
3937194 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.92 86.0 7.57e-01 100.0% 75.4%
3976834 4.1.1.156 beta barrels › SH3 › SH3 › SH3 › DUF2158 0.92 80.0 7.88e-01 100.0% 88.0%
3486327 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.92 82.0 7.46e-01 100.0% 75.0%
3660922 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.92 87.0 7.61e-01 100.0% 72.3%
3651964 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.92 87.0 6.18e-01 100.0% 39.2%
3756428 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.92 87.0 6.51e-01 100.0% 47.0%
3555930 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.92 86.0 7.37e-01 100.0% 67.1%
4024915 4.1.1.237 beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.92 86.0 7.56e-01 100.0% 73.8%
3476179 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.92 86.0 6.59e-01 100.0% 49.5%
3415020 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.91 86.0 6.97e-01 100.0% 58.7%
3555931 4.1.1.322 beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.91 85.0 6.17e-01 100.0% 40.9%
3866505 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.91 85.0 8.03e-01 100.0% 85.5%
3938261 4.1.1.360 beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.91 86.0 5.75e-01 100.0% 31.3%
4593903 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.91 84.0 6.59e-01 100.0% 63.3%
4547820 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.91 85.0 6.32e-01 100.0% 44.8%
3366578 4.1.1.325 beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.91 85.0 6.07e-01 100.0% 39.2%
3486329 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.91 85.0 7.49e-01 100.0% 73.8%
3885050 4.1.1.360 beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.91 85.0 5.52e-01 100.0% 26.9%
3486495 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.91 85.0 5.53e-01 100.0% 26.9%
5074039 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.91 83.0 6.99e-01 100.0% 76.0%
3222146 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.91 84.0 7.43e-01 100.0% 72.3%
3931905 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.91 84.0 6.12e-01 100.0% 42.6%
4284598 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.91 83.0 6.54e-01 100.0% 63.3%
4946972 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.91 83.0 6.54e-01 100.0% 63.3%
3302818 4.1.1.236 beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.90 78.0 7.38e-01 100.0% 80.0%
4941299 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.90 79.0 6.39e-01 95.7% 63.5%
4002679 4.1.1.322 beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.90 84.0 6.01e-01 100.0% 39.2%
5050368 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.90 82.0 6.32e-01 100.0% 59.2%
4932696 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.90 82.0 6.30e-01 100.0% 57.0%
5067227 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.90 82.0 6.68e-01 100.0% 68.7%
3237859 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.90 83.0 7.86e-01 100.0% 85.5%
3274582 4.1.1.365 beta barrels › SH3 › SH3 › SH3 › SH3_KIN17_C 0.90 83.0 7.83e-01 100.0% 85.5%
5001589 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.90 82.0 6.24e-01 100.0% 57.0%
4461457 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.90 82.0 7.29e-01 100.0% 75.0%
3820065 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.89 82.0 7.74e-01 100.0% 85.5%
3485965 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.89 80.0 7.34e-01 100.0% 76.7%
3519125 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.89 78.0 7.68e-01 100.0% 90.0%
3514522 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.89 82.0 6.86e-01 100.0% 86.7%
5011500 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.89 80.0 6.16e-01 100.0% 57.0%
3684646 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.89 82.0 6.69e-01 100.0% 58.7%
3819340 4.1.1.322 beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.88 81.0 5.86e-01 100.0% 39.2%
4937705 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.88 80.0 6.35e-01 100.0% 63.3%
3703934 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.88 79.0 7.30e-01 100.0% 78.3%
5064571 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.88 81.0 6.37e-01 100.0% 63.3%
3296864 4.1.1.236 beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.88 76.0 6.97e-01 100.0% 73.3%
3296865 4.1.1.237 beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.88 80.0 6.01e-01 100.0% 45.7%
3598283 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.88 79.0 5.62e-01 100.0% 36.2%
4932493 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.87 80.0 7.08e-01 100.0% 73.8%
3586487 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.87 77.0 6.20e-01 100.0% 52.9%
3358753 4.1.1.381 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5, KOW4_SPT5 0.87 79.0 5.27e-01 100.0% 29.1%
3474715 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.86 76.0 6.71e-01 100.0% 69.2%
3498280 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.86 75.0 5.32e-01 100.0% 34.6%
3634475 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 75.0 6.59e-01 100.0% 91.4%
4000280 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 75.0 7.12e-01 100.0% 81.8%
3941391 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.84 73.0 6.69e-01 95.7% 75.0%
3630782 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.84 76.0 5.25e-01 100.0% 42.1%
3169706 4.7.1.1 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.84 73.0 5.08e-01 100.0% 34.7%
3230400 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 72.0 6.47e-01 100.0% 93.8%
4890270 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.82 72.0 6.83e-01 100.0% 83.3%
3281945 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.81 71.0 5.78e-01 100.0% 66.7%
4282868 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.80 69.0 6.09e-01 100.0% 80.0%
4079197 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 70.0 5.76e-01 100.0% 60.0%
4559371 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 69.0 6.33e-01 100.0% 79.4%
4058174 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.77 69.0 6.19e-01 100.0% 72.3%
5065747 4.11.1.1 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.77 67.0 5.44e-01 100.0% 52.2%
3914746 4.1.1.128 beta barrels › SH3 › SH3 › SH3 › Tudor_4 0.76 67.0 5.84e-01 97.9% 65.7%
5022491 4.1.1.182 beta barrels › SH3 › SH3 › SH3 › DUF2097 0.73 63.0 5.23e-01 100.0% 62.4%
3507003 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 62.0 5.42e-01 100.0% 86.7%
3727542 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 61.0 5.01e-01 100.0% 57.8%
4481026 4.1.1.407 beta barrels › SH3 › SH3 › SH3 › PF29661 0.58 46.0 4.40e-01 100.0% 80.0%