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SR-VP_4-6_scaffold_141_2201553_prodigal-single.1__X__X__00330

Bact-Vir

SR-VP_4-6_scaffold_141_2201553_prodigal-single.1__X__X__00330

Identity

Kingdom:
phage

Quality

54.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-57
PDB
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3mfiA02 3.40.1170.60 Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › 0.52 44.0 3.60e-01 98.0% 81.4%
4w9nC02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 42.0 3.05e-01 100.0% 34.9%
1ii2B01 3.40.449.10 Alpha Beta › 3-Layer(aba) Sandwich › Phosphoenolpyruvate Carboxykinase; domain 1 › Phosphoenolpyruvate Carboxykinase, domain 1 0.51 42.0 2.99e-01 100.0% 70.8%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3288573 2003.1.5.39 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_19 0.53 42.0 2.73e-01 93.9% 39.2%
D2 high residues 78-130
PDB