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SR-VP_4-6_scaffold_141_2630357_prodigal-single.1__X__X__00013
Bact-VirSR-VP_4-6_scaffold_141_2630357_prodigal-single.1__X__X__00013
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 158-375
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05272.18 best | VapE-like_dom | 115.4 | 3.70e-33 | 97.7% | 94.0% |
| PF00910.29 | RNA_helicase | 22.6 | 1.70e-04 | 37.6% | 73.3% |
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tueD00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.76 | 62.0 | 6.49e-01 | 89.9% | 92.1% |
| 1r6bX04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.71 | 55.0 | 5.75e-01 | 78.4% | 96.4% |
| 3m6aA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 48.0 | 5.70e-01 | 76.6% | 100.0% |
| 1svmA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 49.0 | 5.76e-01 | 75.2% | 100.0% |
| 1g8pA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 50.0 | 5.22e-01 | 74.8% | 98.0% |
| 3ja8204 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 62.0 | 5.31e-01 | 99.5% | 91.5% |
| 4zpxA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 48.0 | 4.75e-01 | 73.9% | 91.8% |
| 4r7zA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 59.0 | 5.24e-01 | 100.0% | 97.5% |
| 4rh7A01 | 1.20.920.20 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.63 | 48.0 | 3.96e-01 | 79.4% | 78.3% |
| 1w5sA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 46.0 | 4.88e-01 | 75.2% | 99.5% |
| 3vkgA10 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 46.0 | 4.88e-01 | 77.1% | 99.0% |
| 1htwA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 40.0 | 4.65e-01 | 92.7% | 93.7% |
| 2vsqA04 | 3.40.50.980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 30.0 | 3.73e-01 | 81.7% | 77.9% |
| 1amuA01 | 3.40.50.980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 31.0 | 3.50e-01 | 84.9% | 66.1% |
| 2mr5A00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 35.0 | 4.31e-01 | 79.4% | 100.0% |
| 2zpaA01 | 3.40.50.11040 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 38.0 | 4.13e-01 | 91.7% | 85.5% |
| 3fj1A01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.54 | 39.0 | 4.13e-01 | 82.1% | 81.9% |
| 3rhfD00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 45.0 | 4.19e-01 | 90.4% | 93.5% |
| 4s1wB02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.53 | 35.0 | 4.09e-01 | 79.4% | 96.6% |
| 4dadA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 31.0 | 3.93e-01 | 73.9% | 96.9% |
| 3g68A02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.53 | 35.0 | 4.09e-01 | 81.2% | 98.6% |
| 3knzA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.52 | 35.0 | 4.12e-01 | 82.1% | 100.0% |
| 4wd1A01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.52 | 37.0 | 2.99e-01 | 96.8% | 37.2% |
| 1tjyA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 36.0 | 4.12e-01 | 95.9% | 99.3% |
| 3czqC00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 44.0 | 4.08e-01 | 92.7% | 90.1% |
| 6c6bB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 36.0 | 3.82e-01 | 72.5% | 89.4% |
| 5bq3A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 35.0 | 4.04e-01 | 95.9% | 98.7% |
ECOD (62)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4033843 | 2004.1.1.313 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › VapE-like_dom | 0.92 | 76.0 | 8.02e-01 | 87.6% | 93.8% |
| 5035042 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.75 | 71.0 | 6.50e-01 | 100.0% | 85.5% |
| 5003620 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.75 | 69.0 | 5.87e-01 | 100.0% | 63.3% |
| 5081314 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.75 | 70.0 | 6.53e-01 | 100.0% | 83.1% |
| 5013281 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.74 | 65.0 | 5.96e-01 | 93.6% | 82.8% |
| 5029777 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.74 | 70.0 | 6.59e-01 | 100.0% | 86.3% |
| 3945876 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.74 | 70.0 | 6.49e-01 | 100.0% | 83.4% |
| 3253892 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.73 | 63.0 | 6.61e-01 | 91.7% | 100.0% |
| 5058121 | 2004.1.1.1224 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF31144 | 0.73 | 68.0 | 6.08e-01 | 99.1% | 80.7% |
| 3256248 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.73 | 46.0 | 5.66e-01 | 70.2% | 97.1% |
| 4931926 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.72 | 66.0 | 5.78e-01 | 96.8% | 78.7% |
| 4959586 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.72 | 67.0 | 6.19e-01 | 100.0% | 79.2% |
| 4973289 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.72 | 67.0 | 6.30e-01 | 100.0% | 84.5% |
| 3254493 | 2004.1.1.153 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2 | 0.70 | 54.0 | 5.12e-01 | 79.4% | 89.6% |
| 1312358 | 2004.1.1.183 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_9 | 0.70 | 48.0 | 5.62e-01 | 78.4% | 98.7% |
| 4944898 | 2004.1.1.1210 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_lid_2 | 0.69 | 59.0 | 5.56e-01 | 88.1% | 97.6% |
| 3968271 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.69 | 58.0 | 5.90e-01 | 86.7% | 98.6% |
| 4351475 | 2004.1.1.624 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase, AAA_5 | 0.69 | 58.0 | 5.46e-01 | 88.5% | 94.7% |
| None | — | 0.69 | 64.0 | 5.42e-01 | 100.0% | 91.4% | |
| 3677397 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.69 | 63.0 | 4.78e-01 | 98.6% | 72.8% |
| 3938925 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.69 | 44.0 | 5.08e-01 | 74.3% | 88.4% |
| None | — | 0.69 | 64.0 | 4.88e-01 | 100.0% | 76.7% | |
| None | — | 0.69 | 63.0 | 4.92e-01 | 98.6% | 75.8% | |
| 3465917 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.68 | 63.0 | 4.82e-01 | 98.6% | 76.2% |
| None | — | 0.68 | 63.0 | 5.22e-01 | 100.0% | 92.5% | |
| 5023501 | 2004.1.1.58 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase | 0.68 | 52.0 | 4.94e-01 | 78.9% | 99.6% |
| 3550992 | 2004.1.1.418 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase | 0.68 | 58.0 | 5.46e-01 | 90.8% | 92.8% |
| None | — | 0.68 | 48.0 | 5.39e-01 | 75.2% | 92.4% | |
| None | — | 0.68 | 48.0 | 5.49e-01 | 74.3% | 96.9% | |
| 3255516 | 2004.1.1.46 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM | 0.67 | 57.0 | 5.24e-01 | 89.9% | 94.0% |
| None | — | 0.67 | 47.0 | 5.32e-01 | 74.3% | 91.2% | |
| None | — | 0.67 | 48.0 | 5.35e-01 | 76.1% | 90.9% | |
| 5048100 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.67 | 57.0 | 5.42e-01 | 89.0% | 98.4% |
| None | — | 0.67 | 47.0 | 5.43e-01 | 74.3% | 96.9% | |
| None | — | 0.67 | 48.0 | 5.25e-01 | 76.1% | 88.3% | |
| 4443044 | 2004.1.1.1014 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27228 | 0.67 | 61.0 | 5.45e-01 | 99.1% | 94.2% |
| 3711362 | 2004.1.1.296 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM_bind | 0.67 | 57.0 | 5.70e-01 | 89.9% | 95.9% |
| 3608226 | 2004.1.1.296 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM_bind | 0.67 | 56.0 | 5.73e-01 | 88.5% | 99.5% |
| 4994590 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 56.0 | 5.75e-01 | 89.0% | 100.0% |
| 4013468 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 54.0 | 4.99e-01 | 84.9% | 96.4% |
| 3596203 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 53.0 | 5.42e-01 | 83.5% | 95.2% |
| None | — | 0.66 | 47.0 | 5.01e-01 | 74.8% | 82.1% | |
| 4195107 | 2004.1.1.58 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase | 0.66 | 60.0 | 5.52e-01 | 95.9% | 93.8% |
| 5018481 | 2004.1.1.136 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF927 | 0.66 | 59.0 | 5.38e-01 | 95.9% | 96.5% |
| 3597853 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.65 | 45.0 | 5.05e-01 | 74.3% | 90.3% |
| 4216434 | 2004.1.1.254 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › BrxL_ATPase | 0.65 | 61.0 | 5.20e-01 | 100.0% | 90.6% |
| 3931045 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.65 | 48.0 | 4.92e-01 | 75.7% | 90.7% |
| 4318504 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.65 | 48.0 | 5.42e-01 | 76.1% | 100.0% |
| 3944606 | 2004.1.1.136 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF927 | 0.65 | 59.0 | 5.44e-01 | 100.0% | 98.2% |
| 3700673 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.64 | 46.0 | 5.20e-01 | 73.4% | 93.5% |
| 3719943 | 2004.1.1.183 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_9 | 0.64 | 49.0 | 5.41e-01 | 78.4% | 99.4% |
| 3271689 | 2004.1.1.98 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad17 | 0.64 | 47.0 | 3.87e-01 | 74.3% | 48.9% |
| 3975473 | 2004.1.1.136 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF927 | 0.64 | 59.0 | 5.34e-01 | 100.0% | 98.6% |
| 2925013 | 2004.1.1.98 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad17 | 0.64 | 47.0 | 5.06e-01 | 76.1% | 93.7% |
| 5025903 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 42.0 | 4.75e-01 | 75.2% | 100.0% |
| 3605416 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 41.0 | 4.59e-01 | 75.2% | 96.0% |
| 5071731 | 7584.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding | 0.56 | 33.0 | 4.03e-01 | 73.9% | 89.3% |
| 3390911 | 138.1.1.13 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › AAA | 0.55 | 50.0 | 4.28e-01 | 95.4% | 86.9% |
| 3972238 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.55 | 30.0 | 3.35e-01 | 82.6% | 65.5% |
| 4972064 | 2007.6.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS | 0.54 | 39.0 | 4.29e-01 | 83.0% | 93.5% |
| 3339144 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.53 | 34.0 | 3.42e-01 | 83.0% | 61.8% |
| 3804337 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.53 | 34.0 | 3.46e-01 | 83.0% | 63.3% |
D2
medium
residues 69-157
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7lzaA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 38.0 | 3.85e-01 | 80.9% | 62.2% |
| 2ddhA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.59 | 41.0 | 3.76e-01 | 76.4% | 54.2% |
| 3s64A00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.58 | 42.0 | 4.33e-01 | 85.4% | 84.0% |
| 2ff4A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 44.0 | 4.30e-01 | 85.4% | 76.8% |
| 3qxzA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.55 | 33.0 | 3.88e-01 | 82.0% | 88.3% |
| 4e4fA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.55 | 37.0 | 3.21e-01 | 89.9% | 44.0% |
| 3w3sA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.54 | 38.0 | 2.59e-01 | 73.0% | 72.6% |
| 3q9vA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 35.0 | 3.41e-01 | 76.4% | 61.2% |
| 1q48A00 | 3.90.1010.10 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.52 | 35.0 | 3.12e-01 | 86.5% | 45.5% |
| 3nrkA01 | 1.10.4030.10 | Mainly Alpha › Orthogonal Bundle › Triger factor/SurA peptide-binding fold › Porin chaperone SurA, peptide-binding domain | 0.51 | 39.0 | 3.08e-01 | 83.1% | 81.2% |
| 1p2fA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 38.0 | 3.80e-01 | 80.9% | 74.7% |
| 3sszA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 35.0 | 3.13e-01 | 84.3% | 47.4% |
| 3msyA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 33.0 | 3.15e-01 | 75.3% | 53.2% |
| 2aamC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 36.0 | 2.55e-01 | 77.5% | 23.1% |
| 4djhA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.50 | 36.0 | 2.59e-01 | 75.3% | 68.6% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3967726 | 101.1.6.16 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_22 | 0.59 | 37.0 | 3.84e-01 | 75.3% | 65.9% |
| 3936121 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.59 | 42.0 | 4.05e-01 | 74.2% | 67.0% |
| 3927364 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.58 | 35.0 | 3.51e-01 | 84.3% | 57.8% |
| 4180109 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.57 | 46.0 | 4.59e-01 | 87.6% | 87.8% |
| 3498569 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 41.0 | 3.97e-01 | 82.0% | 68.6% |
| 3973953 | 101.1.2.8 ↗ | alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C | 0.53 | 41.0 | 3.98e-01 | 85.4% | 75.0% |
| 3449310 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 42.0 | 4.16e-01 | 89.9% | 100.0% |
| 1866557 | 873.1.1.2 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R,XylR_N | 0.53 | 39.0 | 3.07e-01 | 79.8% | 46.5% |
| 4161299 | 101.1.2.8 ↗ | alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C | 0.53 | 36.0 | 3.50e-01 | 70.8% | 94.0% |
| 4944043 | 3006.1.1.0 ↗ | a+b two layers › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain | 0.53 | 32.0 | 3.77e-01 | 70.8% | 91.7% |
| 5071449 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.51 | 37.0 | 3.01e-01 | 75.3% | 51.8% |
| None | — | 0.51 | 35.0 | 2.64e-01 | 71.9% | 73.2% | |
| 5081432 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.51 | 36.0 | 3.00e-01 | 75.3% | 54.1% |