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SR-VP_4-6_scaffold_141_2630357_prodigal-single.1__X__X__00053
Bact-VirSR-VP_4-6_scaffold_141_2630357_prodigal-single.1__X__X__00053
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-83
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14716.14 best | HHH_8 | 30.7 | 4.60e-07 | 88.9% | 91.8% |
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3b0xA01 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.88 | 83.0 | 8.08e-01 | 100.0% | 97.7% |
| 2w9mB01 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.88 | 82.0 | 8.03e-01 | 100.0% | 95.3% |
| 3hx0K01 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.86 | 77.0 | 7.71e-01 | 100.0% | 94.0% |
| 2khqA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.69 | 54.0 | 5.08e-01 | 86.4% | 86.3% |
| 1z19A01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.69 | 55.0 | 5.14e-01 | 87.7% | 85.0% |
| 3lysA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.67 | 53.0 | 4.96e-01 | 87.7% | 85.7% |
| 1zv1A00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.65 | 35.0 | 4.05e-01 | 96.3% | 72.9% |
| 1rj1A00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.63 | 49.0 | 4.05e-01 | 84.0% | 66.2% |
| 5m0nA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.63 | 49.0 | 3.13e-01 | 86.4% | 58.6% |
| 6ig5A01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.62 | 55.0 | 4.65e-01 | 100.0% | 76.1% |
| 2gs4A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.61 | 51.0 | 4.03e-01 | 100.0% | 45.6% |
| 3qhbA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.61 | 52.0 | 3.97e-01 | 91.4% | 76.5% |
| 1euhA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.61 | 56.0 | 3.81e-01 | 98.8% | 49.6% |
| 3mzoB00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.60 | 52.0 | 3.97e-01 | 100.0% | 72.4% |
| 4fp4A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.59 | 45.0 | 3.25e-01 | 82.7% | 79.0% |
| 7q37A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.59 | 51.0 | 3.85e-01 | 100.0% | 95.3% |
| 2mx8A01 | 1.10.274.70 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain | 0.58 | 48.0 | 4.33e-01 | 91.4% | 92.9% |
| 2gz4A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.58 | 49.0 | 3.81e-01 | 98.8% | 66.0% |
| 1yfmA01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.57 | 48.0 | 4.22e-01 | 93.8% | 66.7% |
| 7f0aA01 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.57 | 47.0 | 3.72e-01 | 95.1% | 71.0% |
| 2xv4S03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 41.0 | 3.96e-01 | 76.5% | 97.8% |
| 1j09A04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.56 | 33.0 | 3.89e-01 | 93.8% | 95.8% |
| 4f3xA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.56 | 48.0 | 3.36e-01 | 97.5% | 44.2% |
| 7r5yA01 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.56 | 43.0 | 2.81e-01 | 84.0% | 52.2% |
| 1kg2A02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.56 | 46.0 | 4.29e-01 | 98.8% | 84.8% |
| 3lcnB00 | 1.10.340.40 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain | 0.54 | 47.0 | 4.49e-01 | 98.8% | 100.0% |
| 3nz4B03 | 1.10.274.20 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 | 0.54 | 42.0 | 3.96e-01 | 87.7% | 91.3% |
| 5tj5E00 | 1.20.120.610 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase | 0.53 | 47.0 | 3.97e-01 | 100.0% | 61.6% |
| 2yqyA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.53 | 45.0 | 3.99e-01 | 100.0% | 99.2% |
| 1l0oA00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.52 | 43.0 | 3.69e-01 | 95.1% | 92.9% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 44.0 | 4.06e-01 | 100.0% | 73.8% |
| 4lqqB00 | 1.20.140.30 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › MOB kinase activator | 0.52 | 43.0 | 3.63e-01 | 95.1% | 79.5% |
| 4iv6B01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.51 | 36.0 | 3.28e-01 | 75.3% | 79.3% |
| 3a06B03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.51 | 37.0 | 3.67e-01 | 92.6% | 71.6% |
| 6v88A00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.51 | 38.0 | 3.40e-01 | 80.2% | 77.6% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4033987 | 102.1.1.30 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_8 | 0.93 | 86.0 | 8.72e-01 | 97.5% | 97.5% |
| 5072866 | 102.1.1.30 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_8 | 0.91 | 87.0 | 8.54e-01 | 100.0% | 97.6% |
| 4951200 | 102.1.1.30 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_8 | 0.91 | 86.0 | 8.48e-01 | 98.8% | 95.3% |
| 4984012 | 102.1.1.30 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_8 | 0.90 | 82.0 | 8.25e-01 | 96.3% | 100.0% |
| 3344162 | 102.1.1.30 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_8 | 0.89 | 82.0 | 8.27e-01 | 100.0% | 98.8% |
| 5033666 | 102.1.1.30 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_8 | 0.89 | 78.0 | 8.13e-01 | 97.5% | 100.0% |
| 5045366 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.89 | 80.0 | 7.88e-01 | 96.3% | 95.3% |
| 1170602 | 102.1.1.30 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_8 | 0.88 | 83.0 | 7.99e-01 | 100.0% | 95.5% |
| 3956445 | 102.1.1.30 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_8 | 0.88 | 82.0 | 7.88e-01 | 98.8% | 92.2% |
| 3518470 | 102.1.1.30 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_8 | 0.88 | 82.0 | 7.84e-01 | 100.0% | 88.9% |
| 3704918 | 102.1.1.30 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_8 | 0.87 | 78.0 | 7.49e-01 | 98.8% | 85.6% |
| 5076953 | 102.1.1.30 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_8 | 0.86 | 79.0 | 7.78e-01 | 98.8% | 92.9% |
| 4970414 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.85 | 72.0 | 7.45e-01 | 93.8% | 96.0% |
| 4945748 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.84 | 79.0 | 7.60e-01 | 100.0% | 92.2% |
| 3178379 | 102.1.1.30 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_8 | 0.82 | 75.0 | 7.08e-01 | 100.0% | 84.2% |
| 3194380 | 5059.1.1.4 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › Nuc_sug_transp | 0.66 | 46.0 | 3.02e-01 | 74.1% | 64.1% |
| 3941994 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.65 | 57.0 | 4.41e-01 | 100.0% | 78.9% |
| 5016020 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.65 | 57.0 | 4.44e-01 | 100.0% | 84.4% |
| 4012664 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.65 | 47.0 | 4.40e-01 | 96.3% | 62.0% |
| 3518809 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.63 | 51.0 | 3.51e-01 | 86.4% | 28.1% |
| 3714356 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.63 | 46.0 | 4.53e-01 | 96.3% | 72.9% |
| 4938609 | 4952.1.1.1 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › Lyase_1 | 0.62 | 50.0 | 4.07e-01 | 88.9% | 64.5% |
| 3384541 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.61 | 48.0 | 3.89e-01 | 84.0% | 69.0% |
| 3825046 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.61 | 47.0 | 3.93e-01 | 84.0% | 73.8% |
| 3668664 | 632.1.1.12 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › GAUT_1 | 0.61 | 50.0 | 4.47e-01 | 100.0% | 64.3% |
| 3733145 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.61 | 48.0 | 4.00e-01 | 85.2% | 89.3% |
| 3600319 | 3447.1.1.0 ↗ | alpha bundles › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) | 0.60 | 45.0 | 2.92e-01 | 79.0% | 62.7% |
| 4023374 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.60 | 54.0 | 4.56e-01 | 100.0% | 62.2% |
| 4169057 | 4952.1.1.0 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like | 0.60 | 49.0 | 4.70e-01 | 91.4% | 78.9% |
| 3175251 | 3447.1.1.5 ↗ | alpha bundles › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Steroid_dh | 0.58 | 47.0 | 3.48e-01 | 100.0% | 33.2% |
| 3715999 | 3817.1.1.1 ↗ | alpha bundles › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 › Pex19 | 0.57 | 47.0 | 4.44e-01 | 93.8% | 75.0% |
| 5024573 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.56 | 46.0 | 3.75e-01 | 91.4% | 83.9% |
| 3601796 | 3817.1.1.0 ↗ | alpha bundles › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 | 0.56 | 50.0 | 4.65e-01 | 100.0% | 83.0% |
| 3317793 | 611.9.1.4 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N | 0.55 | 48.0 | 4.00e-01 | 100.0% | 57.3% |
| 3877840 | 108.1.1.25 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_4 | 0.52 | 32.0 | 3.41e-01 | 96.3% | 71.4% |
| 4534197 | 101.1.1.16 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_WhiA | 0.51 | 41.0 | 4.17e-01 | 97.5% | 91.3% |
D2
high
residues 86-147
Domain cluster:
rep: SR-VP_0-2_scaffold_141_316084_prodigal-single.1__X__X__00440__D99-153
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14520.13 best | HHH_5 | 30.3 | 6.80e-07 | 88.7% | 93.0% |
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2va8A04 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.85 | 71.0 | 7.45e-01 | 93.5% | 100.0% |
| 2w9mA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.81 | 73.0 | 7.08e-01 | 100.0% | 97.1% |
| 2bgwA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.76 | 67.0 | 6.38e-01 | 100.0% | 83.8% |
| 1y88A02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.74 | 61.0 | 6.25e-01 | 93.5% | 98.3% |
| 1kw4A00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.70 | 58.0 | 5.69e-01 | 96.8% | 87.1% |
| 1pk1B00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.67 | 56.0 | 5.45e-01 | 96.8% | 88.6% |
| 2dkzA01 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.66 | 54.0 | 5.47e-01 | 98.4% | 98.4% |
| 2e8oA01 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.65 | 52.0 | 5.26e-01 | 95.2% | 98.4% |
| 3f2bA06 | 1.10.150.700 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › PolC, middle finger domain | 0.64 | 54.0 | 4.59e-01 | 100.0% | 57.1% |
| 2odmA00 | 1.10.287.750 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like | 0.61 | 44.0 | 4.13e-01 | 77.4% | 91.1% |
| 3fbzA01 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 49.0 | 4.25e-01 | 93.5% | 80.4% |
| 5dcaA11 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 41.0 | 3.44e-01 | 71.0% | 72.4% |
| 1kq4A00 | 3.30.1360.170 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.59 | 49.0 | 3.42e-01 | 91.9% | 64.5% |
| 3akjA02 | 1.10.1070.20 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › | 0.59 | 44.0 | 3.14e-01 | 82.3% | 27.4% |
| 3rv0C02 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.57 | 37.0 | 2.82e-01 | 100.0% | 28.5% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.57 | 38.0 | 3.54e-01 | 88.7% | 56.0% |
| 1m6eX01 | 1.10.1200.270 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Methyltransferase, alpha-helical capping domain | 0.57 | 48.0 | 3.76e-01 | 100.0% | 77.2% |
| 2pg0A01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.56 | 42.0 | 3.54e-01 | 83.9% | 53.8% |
| 2a3vB01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.56 | 46.0 | 4.17e-01 | 98.4% | 90.4% |
| 5c8aA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.56 | 49.0 | 4.56e-01 | 98.4% | 93.6% |
| 4iluA02 | 1.20.58.1290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain | 0.56 | 42.0 | 3.52e-01 | 96.8% | 45.9% |
| 2j3vA02 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.55 | 38.0 | 2.61e-01 | 90.3% | 21.7% |
| 2qyuA02 | 1.25.40.300 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Putative secreted effector protein | 0.54 | 48.0 | 3.38e-01 | 100.0% | 38.5% |
| 2ckoA02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.53 | 47.0 | 3.12e-01 | 100.0% | 84.7% |
| 2guzB00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.51 | 36.0 | 3.57e-01 | 75.8% | 100.0% |
| 3v42A02 | 1.10.10.1730 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Folliculin | 0.50 | 37.0 | 3.54e-01 | 83.9% | 97.5% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4952232 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.86 | 76.0 | 7.53e-01 | 100.0% | 93.8% |
| 5076923 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.85 | 72.0 | 6.96e-01 | 91.9% | 82.9% |
| 5039717 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.85 | 77.0 | 7.42e-01 | 100.0% | 91.4% |
| 5031290 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.85 | 72.0 | 6.90e-01 | 91.9% | 82.9% |
| 197595 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.84 | 73.0 | 7.49e-01 | 96.8% | 100.0% |
| 4640353 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.83 | 73.0 | 7.39e-01 | 96.8% | 98.3% |
| 3391526 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.82 | 74.0 | 6.60e-01 | 100.0% | 78.8% |
| 4965166 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.82 | 71.0 | 7.19e-01 | 95.2% | 98.3% |
| 4942883 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.81 | 66.0 | 6.90e-01 | 90.3% | 100.0% |
| 5073600 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.81 | 70.0 | 7.11e-01 | 100.0% | 100.0% |
| 3627490 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.81 | 72.0 | 5.94e-01 | 100.0% | 81.8% |
| 5065201 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.80 | 70.0 | 6.94e-01 | 96.8% | 96.9% |
| 5035235 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.80 | 70.0 | 6.74e-01 | 100.0% | 87.1% |
| 3174667 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.80 | 68.0 | 6.98e-01 | 95.2% | 100.0% |
| 3860334 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.79 | 71.0 | 6.03e-01 | 100.0% | 98.0% |
| 5000421 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.79 | 70.0 | 6.73e-01 | 98.4% | 91.4% |
| 3211913 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.79 | 71.0 | 6.12e-01 | 100.0% | 94.7% |
| 3246956 | 102.5.1.2 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › DUF4332 | 0.79 | 71.0 | 6.64e-01 | 100.0% | 89.3% |
| 3573558 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.78 | 70.0 | 6.61e-01 | 100.0% | 98.7% |
| 4944083 | 102.1.1.182 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › Rad51 | 0.78 | 67.0 | 6.48e-01 | 96.8% | 88.6% |
| 3537970 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.78 | 67.0 | 6.78e-01 | 95.2% | 100.0% |
| 4999572 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.78 | 66.0 | 6.68e-01 | 95.2% | 98.3% |
| 1503136 | 102.5.1.9 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › DUF7898 | 0.78 | 70.0 | 6.02e-01 | 100.0% | 97.9% |
| 4927478 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.77 | 66.0 | 6.36e-01 | 93.5% | 87.1% |
| 3865559 | 592.1.1.0 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain | 0.77 | 67.0 | 6.86e-01 | 96.8% | 100.0% |
| 3551495 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.77 | 67.0 | 6.83e-01 | 96.8% | 100.0% |
| 3718097 | 102.5.1.2 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › DUF4332 | 0.77 | 66.0 | 6.22e-01 | 96.8% | 98.7% |
| 4597170 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.77 | 65.0 | 6.25e-01 | 93.5% | 85.7% |
| 4199114 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.77 | 63.0 | 6.47e-01 | 91.9% | 98.3% |
| 5045952 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.76 | 65.0 | 6.16e-01 | 96.8% | 83.8% |
| None | — | 0.76 | 60.0 | 5.91e-01 | 85.5% | 81.5% | |
| 3591519 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.76 | 66.0 | 6.38e-01 | 98.4% | 90.0% |
| 3962227 | 102.1.1.51 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH_1 | 0.76 | 61.0 | 5.89e-01 | 88.7% | 78.6% |
| 3626282 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.75 | 65.0 | 5.89e-01 | 96.8% | 71.8% |
| 3717161 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.75 | 65.0 | 6.04e-01 | 98.4% | 78.8% |
| 3594214 | 102.1.1.151 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DUF7898 | 0.75 | 65.0 | 5.65e-01 | 98.4% | 81.1% |
| 3962074 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.74 | 66.0 | 6.18e-01 | 98.4% | 81.3% |
| 5081275 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.73 | 62.0 | 6.19e-01 | 98.4% | 95.4% |
| 3495446 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.73 | 61.0 | 6.25e-01 | 93.5% | 98.3% |
| 3189901 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.73 | 62.0 | 6.00e-01 | 96.8% | 90.0% |
| 4960209 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.73 | 60.0 | 6.08e-01 | 93.5% | 96.7% |
| 3356517 | 102.1.1.20 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IGR | 0.70 | 60.0 | 5.81e-01 | 98.4% | 87.1% |
| 4989822 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.70 | 55.0 | 5.71e-01 | 88.7% | 100.0% |
| 5040400 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.68 | 56.0 | 5.75e-01 | 98.4% | 98.3% |
| 3580914 | 604.12.1.2 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Vta1 | 0.60 | 48.0 | 4.40e-01 | 90.3% | 83.5% |
| 5035234 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 50.0 | 4.77e-01 | 98.4% | 97.3% |
| 3450740 | 109.4.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 | 0.54 | 47.0 | 2.89e-01 | 100.0% | 28.2% |
| 4033046 | 632.19.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 | 0.53 | 33.0 | 3.13e-01 | 91.9% | 53.3% |
| 3673226 | 622.2.1.0 ↗ | alpha bundles › YvfG-like › YvfG-like › YvfG-like | 0.52 | 39.0 | 4.07e-01 | 83.9% | 90.9% |
| 4944936 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.52 | 42.0 | 4.05e-01 | 90.3% | 100.0% |
| 3691784 | 611.3.1.6 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › BLM10_N | 0.52 | 45.0 | 3.94e-01 | 100.0% | 78.9% |
| 4001527 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.51 | 46.0 | 3.52e-01 | 100.0% | 67.9% |