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SR-VP_4-6_scaffold_141_2630357_prodigal-single.1__X__X__00102
Bact-VirSR-VP_4-6_scaffold_141_2630357_prodigal-single.1__X__X__00102
Identity
- Kingdom:
- phage
Quality
77.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-51
Domain cluster:
representative
CATH (78)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hf2B02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.86 | 71.0 | 5.26e-01 | 100.0% | 37.4% |
| 2gukA00 | 3.30.2190.10 | Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like | 0.84 | 73.0 | 5.35e-01 | 100.0% | 37.8% |
| 3l7yA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.83 | 70.0 | 5.18e-01 | 100.0% | 37.6% |
| 3grzB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.82 | 70.0 | 4.50e-01 | 100.0% | 21.8% |
| 3dfeA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.80 | 68.0 | 5.54e-01 | 100.0% | 51.2% |
| 2cyyA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.79 | 65.0 | 5.05e-01 | 100.0% | 42.1% |
| 3rrkA03 | 3.30.70.2750 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.79 | 66.0 | 5.64e-01 | 100.0% | 59.5% |
| 1darA05 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.78 | 64.0 | 5.20e-01 | 100.0% | 47.1% |
| 5suhB01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.78 | 66.0 | 5.10e-01 | 100.0% | 44.4% |
| 1lk5A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.77 | 66.0 | 5.48e-01 | 100.0% | 63.3% |
| 3afgB01 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.77 | 62.0 | 4.98e-01 | 100.0% | 46.0% |
| 3hyiA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.77 | 64.0 | 4.19e-01 | 100.0% | 22.0% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.76 | 60.0 | 5.36e-01 | 100.0% | 60.6% |
| 2ewhA01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.76 | 63.0 | 5.21e-01 | 100.0% | 51.8% |
| 3l7oA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.76 | 65.0 | 5.53e-01 | 100.0% | 66.7% |
| 4qbuA03 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.76 | 64.0 | 5.66e-01 | 100.0% | 68.2% |
| 1nrwA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.76 | 59.0 | 4.26e-01 | 100.0% | 30.0% |
| 3gkuA03 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.75 | 62.0 | 5.36e-01 | 100.0% | 59.2% |
| 3evzA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.75 | 63.0 | 4.29e-01 | 100.0% | 27.1% |
| 3hz7A00 | 3.30.110.40 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain | 0.75 | 62.0 | 5.32e-01 | 100.0% | 57.5% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.74 | 63.0 | 4.25e-01 | 100.0% | 28.1% |
| 2vs7A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.74 | 63.0 | 5.26e-01 | 100.0% | 59.0% |
| 4djbA00 | 3.30.70.2870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 | 0.74 | 62.0 | 4.58e-01 | 100.0% | 52.5% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.74 | 62.0 | 5.12e-01 | 100.0% | 57.3% |
| 2pjdA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.74 | 58.0 | 4.08e-01 | 100.0% | 26.3% |
| 2atzA00 | 3.90.920.20 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › HP0184-like | 0.74 | 60.0 | 4.10e-01 | 100.0% | 26.7% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.73 | 64.0 | 5.32e-01 | 100.0% | 65.3% |
| 3pehA02 | 3.30.70.2140 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 61.0 | 6.08e-01 | 100.0% | 95.5% |
| 2pt7G02 | 3.30.1370.180 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.72 | 59.0 | 5.22e-01 | 97.7% | 64.2% |
| 2lrrA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.72 | 59.0 | 5.14e-01 | 100.0% | 60.0% |
| 1dq3A04 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.71 | 60.0 | 4.51e-01 | 100.0% | 39.5% |
| 5flmA02 | 3.30.1360.140 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.71 | 60.0 | 4.30e-01 | 100.0% | 37.5% |
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.71 | 58.0 | 4.91e-01 | 100.0% | 54.7% |
| 2mq8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.71 | 61.0 | 4.55e-01 | 100.0% | 51.8% |
| 1i6uA01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.71 | 59.0 | 5.15e-01 | 100.0% | 61.8% |
| 4i8oA02 | 3.30.160.690 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain | 0.71 | 53.0 | 4.30e-01 | 88.4% | 41.1% |
| 5wt3A01 | 3.30.70.2580 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 58.0 | 5.17e-01 | 100.0% | 64.6% |
| 4nzrM03 | 3.30.110.180 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › | 0.71 | 60.0 | 4.41e-01 | 100.0% | 38.2% |
| 1yj7B01 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.71 | 58.0 | 5.07e-01 | 100.0% | 63.4% |
| 2mzwA01 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.70 | 60.0 | 5.04e-01 | 100.0% | 57.9% |
| 2x3gA00 | 3.30.70.1910 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 57.0 | 4.37e-01 | 100.0% | 45.7% |
| 2yx1A01 | 3.30.70.2580 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 58.0 | 5.17e-01 | 100.0% | 65.2% |
| 5w2fA01 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.69 | 56.0 | 4.69e-01 | 100.0% | 54.7% |
| 1itpA00 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.69 | 58.0 | 4.91e-01 | 100.0% | 58.4% |
| 1yz7A02 | 3.30.70.1130 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha | 0.68 | 57.0 | 4.62e-01 | 100.0% | 58.9% |
| 2axyA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.68 | 59.0 | 5.03e-01 | 100.0% | 68.1% |
| 4k59A00 | 2.60.40.4380 | Mainly Beta › Sandwich › Immunoglobulin-like › Translational regulator CsrA | 0.67 | 60.0 | 5.19e-01 | 100.0% | 78.8% |
| 2ab5A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.67 | 55.0 | 4.02e-01 | 100.0% | 32.1% |
| 4m1xD00 | 3.30.1360.240 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.67 | 54.0 | 4.74e-01 | 100.0% | 61.1% |
| 4nxyA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.67 | 51.0 | 3.50e-01 | 100.0% | 22.2% |
| 1jg5A00 | 3.30.1410.10 | Alpha Beta › 2-Layer Sandwich › Gtp Cyclohydrolase I Feedback Regulatory Protein; Chain: K › GTP cyclohydrolase I feedback regulatory protein GFRP | 0.66 | 52.0 | 4.44e-01 | 100.0% | 97.6% |
| 1lfwA03 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 53.0 | 4.35e-01 | 100.0% | 47.7% |
| 2bkkA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.65 | 52.0 | 4.28e-01 | 97.7% | 56.7% |
| 1vbkA01 | 3.30.70.1510 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like | 0.65 | 52.0 | 4.43e-01 | 100.0% | 63.9% |
| 3ko2A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.65 | 52.0 | 3.66e-01 | 100.0% | 28.0% |
| 2dy1A03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.65 | 54.0 | 4.60e-01 | 100.0% | 57.9% |
| 3ezjA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.64 | 53.0 | 4.69e-01 | 100.0% | 63.2% |
| 3g7uA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 49.0 | 3.41e-01 | 100.0% | 26.8% |
| 3ncvA02 | 3.30.1370.100 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › MutL, C-terminal domain, regulatory subdomain | 0.63 | 50.0 | 4.05e-01 | 100.0% | 44.0% |
| 2p92A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.62 | 50.0 | 4.08e-01 | 100.0% | 52.6% |
| 4iscA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 51.0 | 3.58e-01 | 100.0% | 90.4% |
| 3dxqA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 51.0 | 4.22e-01 | 100.0% | 51.8% |
| 1i94H01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.60 | 46.0 | 4.10e-01 | 100.0% | 55.1% |
| 3akjA01 | 3.30.200.120 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.58 | 45.0 | 4.02e-01 | 100.0% | 62.2% |
| 5fqdC01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 45.0 | 4.18e-01 | 100.0% | 78.1% |
| 2g47A03 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.57 | 44.0 | 2.96e-01 | 100.0% | 26.4% |
| 2clqA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 42.0 | 3.68e-01 | 100.0% | 56.5% |
| 2lfvA00 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.56 | 45.0 | 3.52e-01 | 100.0% | 39.6% |
| 1ewqB01 | 3.40.1170.10 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › DNA repair protein MutS, domain I | 0.55 | 45.0 | 3.39e-01 | 93.0% | 68.6% |
| 3eo4D00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 42.0 | 3.04e-01 | 97.7% | 45.7% |
| 4fg9A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 45.0 | 3.76e-01 | 100.0% | 54.4% |
| 2mbfA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 40.0 | 3.24e-01 | 90.7% | 71.1% |
| 4g9yA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 41.0 | 3.05e-01 | 100.0% | 36.0% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 40.0 | 3.11e-01 | 88.4% | 62.9% |
| 3bz6A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 41.0 | 3.56e-01 | 100.0% | 74.4% |
| 4xrfA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 39.0 | 2.96e-01 | 100.0% | 37.3% |
| 1ub9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 40.0 | 3.26e-01 | 100.0% | 49.0% |
| 3nqoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 38.0 | 2.73e-01 | 97.7% | 28.8% |
ECOD (88)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5051899 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.91 | 81.0 | 5.10e-01 | 100.0% | 22.0% |
| 3838183 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.88 | 74.0 | 6.90e-01 | 100.0% | 74.5% |
| 5054678 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.86 | 75.0 | 6.26e-01 | 100.0% | 57.3% |
| 4928540 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.86 | 70.0 | 6.50e-01 | 100.0% | 72.2% |
| 4952784 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.84 | 73.0 | 5.78e-01 | 100.0% | 48.9% |
| 4966429 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.84 | 74.0 | 6.29e-01 | 100.0% | 61.4% |
| 4523274 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.84 | 74.0 | 4.75e-01 | 100.0% | 22.1% |
| 5620 | 320.3.1.1 ↗ | a+b two layers › R3H domain-like › PG1857-like › PG1857-like › DUF2023 | 0.84 | 73.0 | 5.35e-01 | 100.0% | 37.8% |
| 3585079 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.83 | 71.0 | 4.51e-01 | 100.0% | 20.5% |
| 4633932 | 2003.1.5.25 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB | 0.82 | 69.0 | 4.39e-01 | 93.0% | 20.5% |
| 4651438 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.82 | 71.0 | 4.48e-01 | 97.7% | 21.0% |
| 4492797 | 2003.1.5.68 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS_N | 0.82 | 68.0 | 4.56e-01 | 100.0% | 24.8% |
| 3674481 | 2003.1.5.154 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_29, Methyltransf_11 | 0.81 | 71.0 | 3.98e-01 | 100.0% | 9.1% |
| 4987374 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.81 | 68.0 | 5.78e-01 | 100.0% | 57.3% |
| 5029381 | 871.1.1.1 ↗ | a+b two layers › SSo0622-like (Pfam 02676) › SSo0622-like (Pfam 02676) › SSo0622-like (Pfam 02676) › TYW3 | 0.80 | 69.0 | 4.47e-01 | 100.0% | 22.6% |
| 3598932 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.80 | 70.0 | 5.26e-01 | 100.0% | 42.9% |
| 3545474 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.80 | 70.0 | 5.52e-01 | 100.0% | 54.4% |
| 4955266 | 328.5.1.0 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like | 0.80 | 68.0 | 5.64e-01 | 100.0% | 53.8% |
| 3367254 | 2003.1.5.154 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_29, Methyltransf_11 | 0.80 | 69.0 | 3.80e-01 | 100.0% | 7.5% |
| 4998391 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.80 | 67.0 | 5.38e-01 | 100.0% | 51.1% |
| 5051275 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.79 | 68.0 | 5.73e-01 | 100.0% | 57.3% |
| 4316518 | 304.19.1.1 ↗ | a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha | 0.79 | 68.0 | 5.37e-01 | 100.0% | 61.1% |
| 4931923 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.79 | 69.0 | 5.60e-01 | 100.0% | 53.8% |
| 4283073 | 304.162.1.2 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M | 0.78 | 68.0 | 5.94e-01 | 100.0% | 67.7% |
| 4930013 | 304.162.1.2 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M | 0.78 | 66.0 | 5.85e-01 | 100.0% | 69.2% |
| 4516880 | 304.8.1.74 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF26539 | 0.77 | 65.0 | 5.44e-01 | 100.0% | 53.8% |
| 4993809 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.77 | 66.0 | 5.09e-01 | 100.0% | 44.0% |
| 5035888 | 304.19.1.1 ↗ | a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha | 0.76 | 66.0 | 5.31e-01 | 100.0% | 57.6% |
| 5301 | 304.24.1.2 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF1949 | 0.76 | 60.0 | 5.33e-01 | 100.0% | 59.7% |
| 3672141 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.76 | 64.0 | 5.56e-01 | 100.0% | 65.7% |
| 5077094 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.76 | 64.0 | 5.13e-01 | 100.0% | 47.8% |
| 5069904 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.75 | 60.0 | 4.31e-01 | 100.0% | 29.3% |
| 3603087 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.75 | 64.0 | 5.20e-01 | 100.0% | 50.6% |
| 4972691 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.75 | 62.0 | 4.84e-01 | 100.0% | 44.0% |
| 5043257 | 304.24.1.5 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › Trm5_N | 0.74 | 64.0 | 5.61e-01 | 100.0% | 66.2% |
| 4063927 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.74 | 62.0 | 4.09e-01 | 100.0% | 24.7% |
| 2075991 | 3012.1.1.4 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 | 0.74 | 60.0 | 4.49e-01 | 90.7% | 66.7% |
| 4092153 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.74 | 63.0 | 5.02e-01 | 100.0% | 50.0% |
| 5027689 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.74 | 60.0 | 5.05e-01 | 100.0% | 52.5% |
| 3290652 | 306.2.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor | 0.74 | 61.0 | 4.96e-01 | 100.0% | 51.1% |
| 3322864 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.73 | 60.0 | 5.02e-01 | 100.0% | 51.2% |
| 3629627 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.73 | 60.0 | 5.19e-01 | 100.0% | 94.7% |
| 3755164 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.73 | 63.0 | 5.29e-01 | 100.0% | 65.3% |
| 5013983 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.73 | 60.0 | 4.51e-01 | 100.0% | 38.3% |
| 3838105 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.73 | 61.0 | 5.35e-01 | 100.0% | 62.9% |
| 3223769 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.73 | 62.0 | 5.58e-01 | 100.0% | 70.0% |
| 4248896 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.73 | 61.0 | 5.41e-01 | 100.0% | 66.2% |
| 5059195 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.72 | 61.0 | 5.55e-01 | 100.0% | 71.7% |
| 5031915 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.72 | 60.0 | 4.95e-01 | 100.0% | 52.9% |
| 3315583 | 304.162.1.2 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M | 0.71 | 58.0 | 5.05e-01 | 100.0% | 60.0% |
| 4297401 | 304.110.1.0 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like | 0.71 | 59.0 | 4.96e-01 | 100.0% | 57.5% |
| 4997777 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.71 | 58.0 | 4.82e-01 | 100.0% | 50.6% |
| 5026555 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.71 | 57.0 | 5.15e-01 | 97.7% | 70.8% |
| 139956 | 304.8.1.16 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › 117-like_vir | 0.70 | 57.0 | 4.37e-01 | 100.0% | 45.7% |
| 4979612 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.70 | 56.0 | 5.10e-01 | 97.7% | 70.8% |
| 5070420 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.70 | 57.0 | 4.07e-01 | 100.0% | 29.3% |
| 3944435 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.70 | 60.0 | 5.03e-01 | 100.0% | 61.3% |
| 5004123 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.69 | 54.0 | 4.57e-01 | 100.0% | 50.0% |
| 3255461 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.69 | 59.0 | 4.81e-01 | 100.0% | 57.6% |
| 5049490 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.69 | 56.0 | 4.40e-01 | 100.0% | 41.0% |
| 3195155 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.69 | 55.0 | 4.94e-01 | 100.0% | 70.0% |
| 138898 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.69 | 52.0 | 4.83e-01 | 100.0% | 64.4% |
| 4409787 | 327.19.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C | 0.69 | 55.0 | 4.55e-01 | 100.0% | 48.8% |
| 5075325 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.69 | 56.0 | 3.81e-01 | 100.0% | 24.6% |
| 5029009 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.68 | 55.0 | 5.01e-01 | 100.0% | 70.8% |
| 3981894 | 304.8.1.25 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF5609 | 0.68 | 55.0 | 5.02e-01 | 100.0% | 66.2% |
| 4982812 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.68 | 55.0 | 4.74e-01 | 97.7% | 61.3% |
| 4971456 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.68 | 55.0 | 5.00e-01 | 100.0% | 70.8% |
| 5050680 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.68 | 55.0 | 4.71e-01 | 100.0% | 56.0% |
| 3619277 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.68 | 46.0 | 3.69e-01 | 72.1% | 40.0% |
| 5042070 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.68 | 56.0 | 4.99e-01 | 97.7% | 64.6% |
| 1095599 | 4313.1.1.1 ↗ | beta duplicates or obligate multimers › CsrA-like › CsrA-like › CsrA-like › CsrA | 0.67 | 60.0 | 5.19e-01 | 100.0% | 78.8% |
| 4947922 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.67 | 54.0 | 4.87e-01 | 97.7% | 70.8% |
| 1388654 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.67 | 55.0 | 3.80e-01 | 100.0% | 26.8% |
| 5020167 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.67 | 52.0 | 4.62e-01 | 100.0% | 61.3% |
| 4523487 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.67 | 55.0 | 4.94e-01 | 100.0% | 66.2% |
| 5051463 | 304.54.1.0 ↗ | a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like | 0.65 | 53.0 | 4.42e-01 | 100.0% | 51.2% |
| 5052337 | 304.165.1.0 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 | 0.65 | 52.0 | 3.81e-01 | 100.0% | 30.7% |
| 3361133 | 304.9.1.47 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4283 | 0.65 | 55.0 | 4.69e-01 | 100.0% | 58.7% |
| 5049444 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.64 | 53.0 | 3.34e-01 | 100.0% | 16.5% |
| 5062574 | 328.12.1.0 ↗ | a+b two layers › IF3-like › IF3-like domain in Nudix hydrolase › IF3-like domain in Nudix hydrolase | 0.63 | 49.0 | 3.93e-01 | 100.0% | 41.1% |
| 5032320 | 242.1.1.2 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 | 0.62 | 48.0 | 4.05e-01 | 100.0% | 48.2% |
| 3644183 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.61 | 43.0 | 4.00e-01 | 81.4% | 57.8% |
| 3688358 | 101.1.2.34 ↗ | alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding | 0.59 | 52.0 | 4.25e-01 | 100.0% | 70.0% |
| 4938874 | 3110.1.1.0 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain | 0.56 | 48.0 | 3.35e-01 | 100.0% | 28.7% |
| 4806761 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.54 | 41.0 | 3.37e-01 | 100.0% | 42.9% |
| 3825379 | 387.1.5.1 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › Gamma-thionin | 0.53 | 38.0 | 3.86e-01 | 100.0% | 95.5% |
| 3598643 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 41.0 | 3.65e-01 | 100.0% | 68.6% |