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SR-VP_4-6_scaffold_141_2630357_prodigal-single.1__X__X__00108
Bact-VirSR-VP_4-6_scaffold_141_2630357_prodigal-single.1__X__X__00108
Identity
- Kingdom:
- phage
Quality
96.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-97
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8fbnB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.68 | 60.0 | 4.67e-01 | 100.0% | 61.7% |
| 1rz4A01 | 1.25.40.250 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat; domain 1 | 0.68 | 54.0 | 5.00e-01 | 89.6% | 67.5% |
| 4qmhA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.67 | 59.0 | 4.49e-01 | 100.0% | 43.2% |
| 2lmgA00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.66 | 34.0 | 3.79e-01 | 83.3% | 63.5% |
| 1uw4B00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 56.0 | 4.18e-01 | 100.0% | 55.2% |
| 3nb2A02 | 1.25.40.300 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Putative secreted effector protein | 0.62 | 55.0 | 4.76e-01 | 100.0% | 61.9% |
| 1bk6A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.61 | 55.0 | 3.58e-01 | 100.0% | 23.5% |
| 4ui9Y03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 44.0 | 4.69e-01 | 96.9% | 91.3% |
| 1qqeA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 53.0 | 3.88e-01 | 100.0% | 39.9% |
| 2vgxB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.60 | 43.0 | 3.84e-01 | 89.6% | 50.3% |
| 3as5A01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 44.0 | 3.67e-01 | 96.9% | 44.9% |
| 4ga0A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 44.0 | 3.90e-01 | 93.8% | 55.2% |
| 4yvoA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 49.0 | 4.64e-01 | 96.9% | 79.8% |
| 4rg6A02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 40.0 | 4.37e-01 | 86.5% | 93.5% |
| 3ro3A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 47.0 | 4.09e-01 | 100.0% | 58.5% |
| 3d7iB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.53 | 39.0 | 3.94e-01 | 78.1% | 100.0% |
| 4p3gD00 | 1.10.3450.40 | Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › Signal recognition particle, SRP68 subunit, RNA-binding domain | 0.52 | 45.0 | 3.63e-01 | 97.9% | 92.8% |
| 4bemJ00 | 1.20.120.610 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase | 0.51 | 39.0 | 3.17e-01 | 81.2% | 68.5% |
| 2lqgA00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.51 | 36.0 | 3.21e-01 | 72.9% | 78.3% |
| 2mhkA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 43.0 | 4.03e-01 | 97.9% | 92.8% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3832302 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.70 | 60.0 | 5.07e-01 | 100.0% | 56.9% |
| 3268516 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 56.0 | 4.60e-01 | 92.7% | 52.5% |
| 3188959 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 49.0 | 4.92e-01 | 92.7% | 76.5% |
| 3633920 | 109.4.1.464 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exportin-T | 0.67 | 59.0 | 4.09e-01 | 99.0% | 50.3% |
| 3196470 | 109.59.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain | 0.67 | 49.0 | 5.09e-01 | 96.9% | 85.4% |
| 3684662 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.67 | 58.0 | 4.26e-01 | 100.0% | 35.8% |
| 3657260 | 109.59.1.16 ↗ | alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain › PPR | 0.67 | 48.0 | 5.24e-01 | 76.0% | 96.0% |
| 3710187 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 49.0 | 4.37e-01 | 91.7% | 58.5% |
| 3224801 | 109.4.1.449 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2,TPR_8 | 0.63 | 48.0 | 4.19e-01 | 84.4% | 52.7% |
| 3920949 | 109.4.1.218 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SNAP | 0.62 | 53.0 | 4.31e-01 | 93.8% | 51.1% |
| 3659120 | 109.4.1.68 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Coatomer_E | 0.62 | 44.0 | 4.22e-01 | 92.7% | 64.5% |
| 3647515 | 109.4.1.1606 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30484 | 0.62 | 47.0 | 4.57e-01 | 100.0% | 72.7% |
| 3785633 | 109.4.1.1999 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_12, TPR_16 | 0.62 | 48.0 | 4.00e-01 | 90.6% | 45.6% |
| 3739941 | 109.4.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1,TPR_12 | 0.61 | 48.0 | 4.02e-01 | 90.6% | 48.2% |
| 4009331 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 45.0 | 4.01e-01 | 100.0% | 53.6% |
| 3551839 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 45.0 | 3.84e-01 | 100.0% | 47.0% |
| 3738554 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 53.0 | 3.91e-01 | 100.0% | 49.3% |
| 3671587 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.60 | 47.0 | 3.96e-01 | 100.0% | 48.8% |
| 4374417 | 109.4.1.11 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI3Ka | 0.59 | 52.0 | 3.76e-01 | 100.0% | 34.0% |
| 3509829 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 45.0 | 3.92e-01 | 91.7% | 52.7% |
| 5075208 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 49.0 | 3.50e-01 | 95.8% | 90.3% |
| 3938639 | 109.4.1.186 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ANAPC3 | 0.57 | 46.0 | 3.50e-01 | 100.0% | 35.1% |
| None | — | 0.57 | 43.0 | 3.97e-01 | 95.8% | 60.8% | |
| 3490196 | 109.4.1.5 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 | 0.56 | 45.0 | 4.03e-01 | 94.8% | 61.5% |
| 3704025 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 49.0 | 3.85e-01 | 100.0% | 54.1% |
| 4434445 | 109.4.1.192 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 | 0.56 | 45.0 | 3.79e-01 | 96.9% | 50.0% |
| 4374654 | 109.4.1.362 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1,TPR_8 | 0.56 | 46.0 | 3.94e-01 | 97.9% | 55.5% |
| 3166845 | 109.4.1.5 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 | 0.56 | 46.0 | 3.67e-01 | 100.0% | 41.9% |
| 3609262 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 48.0 | 3.57e-01 | 97.9% | 64.3% |
| 3399981 | 109.4.1.1666 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_10 | 0.54 | 44.0 | 3.91e-01 | 100.0% | 58.7% |
| 3330849 | 109.4.1.31 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MA3 | 0.54 | 46.0 | 4.31e-01 | 99.0% | 81.6% |
| 3580232 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 45.0 | 3.74e-01 | 96.9% | 63.9% |
| 3991556 | 109.4.1.1454 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_17 | 0.53 | 45.0 | 3.82e-01 | 96.9% | 69.7% |
| 3268439 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 45.0 | 3.69e-01 | 100.0% | 60.0% |