←Back to structures

SR-VP_4-6_scaffold_141_2630357_prodigal-single.1__X__X__00133

Bact-Vir

SR-VP_4-6_scaffold_141_2630357_prodigal-single.1__X__X__00133

Identity

Kingdom:
phage

Quality

65.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-77
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.51 37.0 3.48e-01 77.4% 92.0%
5i9eA03 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.51 38.0 3.22e-01 83.9% 77.0%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3723153 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.57 43.0 2.64e-01 85.5% 75.3%
3364928 2007.2.3.9 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTPlike_phytase 0.54 41.0 2.68e-01 90.3% 85.6%
4087557 7581.1.1.1 ↗ a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N 0.53 37.0 2.46e-01 74.2% 82.7%
3717848 2007.2.3.9 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTPlike_phytase 0.52 39.0 2.28e-01 88.7% 41.2%
D2 medium residues 82-166
PDB
D3 medium residues 197-256
PDB
D4 medium residues 275-326
PDB