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SR-VP_4-6_scaffold_141_2630357_prodigal-single.1__X__X__00157
Bact-VirSR-VP_4-6_scaffold_141_2630357_prodigal-single.1__X__X__00157
Identity
- Kingdom:
- phage
Quality
70.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-50
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1t62B00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.71 | 48.0 | 3.35e-01 | 72.0% | 25.8% |
| 4m6rA00 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.68 | 48.0 | 3.13e-01 | 76.0% | 86.2% |
| 2plqA00 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.66 | 54.0 | 3.26e-01 | 92.0% | 34.1% |
| 2z99A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 50.0 | 4.19e-01 | 86.0% | 59.8% |
| 2ddmB00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.64 | 52.0 | 3.34e-01 | 96.0% | 49.4% |
| 3hskA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 46.0 | 3.20e-01 | 94.0% | 48.0% |
| 2l95A00 | 1.10.287.2250 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 38.0 | 3.43e-01 | 82.0% | 65.0% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4487068 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.74 | 64.0 | 4.62e-01 | 96.0% | 42.1% |
| 3593555 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.72 | 59.0 | 3.98e-01 | 92.0% | 40.5% |
| 3826103 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.70 | 54.0 | 3.77e-01 | 82.0% | 68.0% |
| 4034096 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 57.0 | 4.86e-01 | 90.0% | 61.3% |
| 3783932 | 101.1.9.47 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › STE | 0.68 | 52.0 | 3.75e-01 | 86.0% | 61.9% |
| 4255852 | 281.1.1.1 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II | 0.58 | 40.0 | 2.63e-01 | 72.0% | 40.0% |
| 4937883 | 150.1.1.5 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › DUF305 | 0.51 | 42.0 | 3.04e-01 | 94.0% | 43.4% |