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SR-VP_4-6_scaffold_141_2630357_prodigal-single.1__X__X__00246
Bact-VirSR-VP_4-6_scaffold_141_2630357_prodigal-single.1__X__X__00246
Identity
- Kingdom:
- phage
Quality
71.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-56
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ljmA00 | 1.20.58.2190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 43.0 | 2.88e-01 | 92.7% | 66.5% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3517171 | 604.8.1.3 ↗ | alpha bundles › Spectrin repeat-like › Smac/diablo › Smac/diablo › Gpi1 | 0.73 | 49.0 | 3.06e-01 | 100.0% | 13.3% |
| 3461696 | 1.1.9.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 | 0.55 | 42.0 | 3.15e-01 | 90.2% | 38.1% |
| 3462660 | 3718.1.1.12 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT › DUF1666 | 0.52 | 38.0 | 2.43e-01 | 85.4% | 33.6% |
| 4020960 | 101.1.2.359 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPIID_WHD | 0.52 | 41.0 | 2.73e-01 | 90.2% | 65.1% |
| 3608727 | 386.1.1.57 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › TRAFD1-XIAF1_ZnF | 0.51 | 33.0 | 3.22e-01 | 70.7% | 48.9% |
| 4166178 | 101.1.8.4 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Flp_C | 0.50 | 36.0 | 2.83e-01 | 90.2% | 58.3% |