Back to structures

SR-VP_4-6_scaffold_141_2630357_prodigal-single.1__X__X__00262

Bact-Vir

SR-VP_4-6_scaffold_141_2630357_prodigal-single.1__X__X__00262

Identity

Kingdom:
phage

Quality

94.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-90
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vq8P03 1.10.1200.60 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › 0.65 35.0 4.06e-01 86.8% 72.7%
5iaiA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 46.0 3.35e-01 98.7% 99.5%
1mw9X02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.51 45.0 3.55e-01 100.0% 89.6%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5073918 378.1.1.2 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.91 70.0 6.39e-01 81.6% 64.2%