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SR-VP_4-6_scaffold_141_3489769_prodigal-single.1__X__X__00059
Bact-VirSR-VP_4-6_scaffold_141_3489769_prodigal-single.1__X__X__00059
Identity
- Kingdom:
- phage
Quality
57.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 54-120
Domain cluster:
representative
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nivC02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.77 | 50.0 | 4.07e-01 | 76.1% | 36.3% |
| 2v6kA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.77 | 51.0 | 4.05e-01 | 76.1% | 35.4% |
| 4pxoA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.75 | 50.0 | 3.97e-01 | 76.1% | 35.1% |
| 7y4rB01 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.74 | 65.0 | 5.54e-01 | 98.5% | 60.4% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 45.0 | 3.89e-01 | 92.5% | 44.8% |
| 3fghA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.71 | 45.0 | 4.60e-01 | 100.0% | 65.7% |
| 3lvyE01 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.70 | 58.0 | 4.33e-01 | 97.0% | 37.0% |
| 1cxzB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.70 | 45.0 | 4.13e-01 | 80.6% | 51.2% |
| 8ctsB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.67 | 56.0 | 5.15e-01 | 100.0% | 71.3% |
| 2ycdA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.66 | 40.0 | 3.34e-01 | 82.1% | 35.0% |
| 3kp9A01 | 1.20.1440.130 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › VKOR domain | 0.66 | 57.0 | 4.32e-01 | 98.5% | 54.9% |
| 1v63A00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.65 | 43.0 | 3.76e-01 | 100.0% | 45.5% |
| 4eqqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 38.0 | 4.43e-01 | 70.1% | 81.2% |
| 1q6aA00 | 1.10.1240.30 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain | 0.64 | 55.0 | 4.79e-01 | 98.5% | 66.4% |
| 3ilkA02 | 1.10.8.590 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.63 | 42.0 | 4.27e-01 | 70.1% | 76.5% |
| 2f2cA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.62 | 51.0 | 4.46e-01 | 94.0% | 90.6% |
| 5zr4A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 45.0 | 3.94e-01 | 83.6% | 52.0% |
| 1n0uA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 48.0 | 3.35e-01 | 85.1% | 66.7% |
| 3kb9A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.60 | 52.0 | 3.36e-01 | 100.0% | 43.5% |
| 5kbwB00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.60 | 50.0 | 3.86e-01 | 98.5% | 81.9% |
| 1gt0D00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.60 | 42.0 | 3.98e-01 | 100.0% | 62.0% |
| 2w0gA00 | 1.20.58.610 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cdc37, Hsp90 binding domain | 0.59 | 49.0 | 4.09e-01 | 98.5% | 75.2% |
| 2bkkC02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.59 | 43.0 | 3.28e-01 | 80.6% | 87.9% |
| 3oo3A00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.58 | 50.0 | 3.18e-01 | 100.0% | 25.9% |
| 5je8B02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.57 | 42.0 | 3.41e-01 | 77.6% | 79.7% |
| 4f5cA04 | 1.25.50.20 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › | 0.56 | 48.0 | 3.15e-01 | 98.5% | 33.7% |
| 3rrcB01 | 1.20.1310.20 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Duffy-antigen binding domain | 0.56 | 46.0 | 3.51e-01 | 91.0% | 67.7% |
| 2uuzB00 | 1.10.10.2020 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Host-nuclease inhibitor protein Gam | 0.56 | 43.0 | 3.91e-01 | 80.6% | 64.7% |
| 2hydA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.56 | 44.0 | 2.84e-01 | 88.1% | 43.3% |
| 1g2rA00 | 3.30.1230.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › YlxR-like | 0.55 | 49.0 | 4.35e-01 | 97.0% | 71.3% |
| 2ld7B00 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.55 | 37.0 | 3.68e-01 | 82.1% | 64.0% |
| 3wd6A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.55 | 41.0 | 3.44e-01 | 80.6% | 70.3% |
| 2wy4A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.55 | 47.0 | 3.80e-01 | 100.0% | 90.6% |
| 1on2A02 | 1.10.60.10 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain | 0.55 | 38.0 | 3.92e-01 | 77.6% | 77.8% |
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.55 | 48.0 | 4.03e-01 | 98.5% | 74.6% |
| 1u5pA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 45.0 | 3.92e-01 | 94.0% | 91.7% |
| 3cexA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.54 | 46.0 | 3.41e-01 | 94.0% | 61.2% |
| 6pw7A01 | 1.10.238.180 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.52 | 36.0 | 3.52e-01 | 83.6% | 64.0% |
| 2f8lA01 | 1.10.150.470 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.52 | 36.0 | 3.46e-01 | 91.0% | 60.5% |
| 7ezyA01 | 1.10.3100.10 | Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein | 0.52 | 41.0 | 3.39e-01 | 83.6% | 53.9% |
| 1vw4T01 | 6.10.330.20 | Special › Helix non-globular › Monooxygenase › | 0.52 | 47.0 | 3.95e-01 | 100.0% | 88.4% |
| 1wgfA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.52 | 29.0 | 3.16e-01 | 70.1% | 64.2% |
| 3d2eA06 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.52 | 38.0 | 3.20e-01 | 77.6% | 57.5% |
| 2zxqA06 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.52 | 39.0 | 4.01e-01 | 80.6% | 93.9% |
| 2yukA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.51 | 39.0 | 3.62e-01 | 85.1% | 75.6% |
| 3d1bB00 | 1.20.920.40 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.51 | 40.0 | 3.42e-01 | 83.6% | 84.3% |
| 2ynqB00 | 1.25.40.680 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain | 0.51 | 43.0 | 3.39e-01 | 97.0% | 77.5% |
| 2e5zA01 | 1.10.10.790 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Surp module | 0.51 | 38.0 | 3.99e-01 | 82.1% | 93.2% |
| 1aabA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.50 | 40.0 | 3.73e-01 | 86.6% | 75.9% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3628378 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.76 | 48.0 | 3.50e-01 | 80.6% | 26.1% |
| 3711112 | 4198.1.1.0 ↗ | alpha arrays › TerB-like › TerB-like › TerB-like | 0.72 | 65.0 | 5.01e-01 | 100.0% | 91.0% |
| 4344838 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.70 | 46.0 | 4.31e-01 | 100.0% | 56.2% |
| 3878853 | 4044.1.1.13 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › BicD | 0.69 | 42.0 | 3.91e-01 | 82.1% | 49.4% |
| 3341091 | 101.35.1.6 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › A_thal_3526 | 0.69 | 46.0 | 4.67e-01 | 80.6% | 70.8% |
| 3428408 | 632.2.1.30 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › Auxin_canalis | 0.68 | 50.0 | 4.83e-01 | 77.6% | 76.0% |
| 3176953 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.67 | 45.0 | 4.43e-01 | 100.0% | 64.3% |
| 3906253 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.67 | 56.0 | 4.69e-01 | 94.0% | 90.8% |
| 3705890 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.67 | 44.0 | 3.84e-01 | 100.0% | 47.4% |
| 3595345 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.67 | 43.0 | 3.83e-01 | 77.6% | 48.9% |
| 3881182 | 3919.1.1.2 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN | 0.66 | 54.0 | 4.41e-01 | 88.1% | 78.3% |
| 3506153 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.66 | 46.0 | 4.27e-01 | 100.0% | 59.0% |
| 3593421 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.66 | 43.0 | 3.87e-01 | 100.0% | 50.0% |
| 3470186 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.65 | 43.0 | 3.88e-01 | 100.0% | 50.0% |
| 3924147 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.65 | 43.0 | 3.87e-01 | 100.0% | 50.0% |
| 3486506 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.65 | 43.0 | 4.14e-01 | 100.0% | 60.0% |
| 4102250 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.65 | 42.0 | 4.02e-01 | 100.0% | 56.2% |
| 4974263 | 138.1.1.2 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › Rep_fac_C | 0.65 | 48.0 | 4.26e-01 | 82.1% | 55.8% |
| 3814458 | 101.1.2.472 ↗ | alpha arrays › HTH › HTH › winged helix domain › A_thal_3526 | 0.64 | 56.0 | 5.34e-01 | 98.5% | 91.3% |
| 3679812 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 55.0 | 3.12e-01 | 95.5% | 9.6% |
| 4943088 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.64 | 47.0 | 3.60e-01 | 80.6% | 34.7% |
| 3405891 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.64 | 49.0 | 4.28e-01 | 80.6% | 61.1% |
| 2410023 | 141.1.1.8 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_syn_C_2 | 0.63 | 53.0 | 3.41e-01 | 91.0% | 36.2% |
| 4952882 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 47.0 | 4.44e-01 | 80.6% | 66.3% |
| 3439843 | 101.1.1.270 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › A_thal_3526 | 0.63 | 55.0 | 5.09e-01 | 98.5% | 85.9% |
| 3379763 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.63 | 42.0 | 3.95e-01 | 98.5% | 57.5% |
| 4039721 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.63 | 52.0 | 4.16e-01 | 92.5% | 68.1% |
| 3334461 | 101.1.1.270 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › A_thal_3526 | 0.62 | 53.0 | 5.14e-01 | 94.0% | 90.7% |
| 5079223 | 183.1.1.1 ↗ | alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Fe_dep_repr_C | 0.62 | 50.0 | 3.86e-01 | 86.6% | 57.2% |
| 5000156 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 38.0 | 4.37e-01 | 74.6% | 84.0% |
| 3490008 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 44.0 | 4.54e-01 | 76.1% | 78.5% |
| 3312794 | 101.1.3.22 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › A_thal_3526 | 0.62 | 54.0 | 5.23e-01 | 98.5% | 97.3% |
| 3688281 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.62 | 45.0 | 4.02e-01 | 77.6% | 60.0% |
| 5042759 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 41.0 | 4.04e-01 | 74.6% | 62.7% |
| 3518405 | 574.1.1.1 ↗ | alpha bundles › Surp module (SWAP domain) › Surp module (SWAP domain) › Surp module (SWAP domain) › Surp | 0.62 | 49.0 | 4.89e-01 | 88.1% | 87.1% |
| 4177433 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.61 | 41.0 | 4.06e-01 | 100.0% | 65.7% |
| 4169648 | 190.1.1.3 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box_2 | 0.61 | 39.0 | 4.04e-01 | 97.0% | 67.7% |
| 3222400 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.61 | 47.0 | 4.32e-01 | 85.1% | 98.9% |
| 3620454 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.61 | 43.0 | 3.25e-01 | 100.0% | 32.7% |
| 138005 | 141.1.1.8 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_syn_C_2 | 0.60 | 52.0 | 3.36e-01 | 100.0% | 43.5% |
| 4983598 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 44.0 | 4.49e-01 | 80.6% | 80.0% |
| 3863510 | 190.1.1.3 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box_2 | 0.60 | 35.0 | 3.43e-01 | 91.0% | 52.0% |
| 4387174 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.60 | 48.0 | 4.29e-01 | 85.1% | 68.9% |
| 3174373 | 101.1.2.780 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF31199 | 0.60 | 42.0 | 4.10e-01 | 74.6% | 66.7% |
| 4952257 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.59 | 45.0 | 3.89e-01 | 82.1% | 85.6% |
| 3870171 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.58 | 45.0 | 4.46e-01 | 83.6% | 100.0% |
| 4975820 | 4133.1.1.0 ↗ | alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like | 0.58 | 45.0 | 4.73e-01 | 83.6% | 95.0% |
| 4214657 | 129.1.1.2 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 3HCDH | 0.57 | 40.0 | 3.90e-01 | 77.6% | 65.3% |
| 4362811 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.57 | 41.0 | 4.52e-01 | 76.1% | 96.4% |
| 1124142 | 3788.1.1.1 ↗ | alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › VPR | 0.57 | 38.0 | 3.46e-01 | 74.6% | 49.0% |
| 4614172 | 601.7.1.6 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › GlnD_UR_UTase | 0.57 | 51.0 | 4.06e-01 | 100.0% | 74.8% |
| 5078625 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.57 | 46.0 | 3.57e-01 | 88.1% | 56.6% |
| 5059337 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.56 | 45.0 | 3.54e-01 | 86.6% | 57.2% |
| 3594798 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 45.0 | 3.10e-01 | 89.6% | 41.2% |
| 3914715 | 605.1.1.235 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › BicD | 0.56 | 41.0 | 3.97e-01 | 77.6% | 76.0% |
| 3220832 | 592.7.1.1 ↗ | alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › GIPC1_GH2 | 0.55 | 42.0 | 3.82e-01 | 82.1% | 93.3% |
| 4344761 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.54 | 43.0 | 3.53e-01 | 91.0% | 86.7% |
| 4995680 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.54 | 39.0 | 4.08e-01 | 85.1% | 91.7% |
| 5034762 | 195.1.1.0 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like | 0.54 | 43.0 | 3.56e-01 | 97.0% | 46.7% |
| 3943344 | 183.1.1.0 ↗ | alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain | 0.53 | 43.0 | 3.40e-01 | 88.1% | 56.4% |
| 3685058 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.50 | 39.0 | 3.73e-01 | 86.6% | 72.5% |
D2
high
residues 139-236