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SR-VP_4-6_scaffold_141_3489769_prodigal-single.1__X__X__00081

Bact-Vir

SR-VP_4-6_scaffold_141_3489769_prodigal-single.1__X__X__00081

Identity

Kingdom:
phage

Quality

80.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-209_567-609
PDB
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF00176.30 best SNF2-rel_dom 47.9 1.40e-12 80.4% 39.6%
PF04851.22 ResIII 31.5 2.30e-07 80.0% 68.3%
PF00270.36 DEAD 25.4 1.50e-05 42.4% 46.7%
CATH (80)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8oosG01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.88 65.0 7.04e-01 89.8% 87.6%
1z6aA01 3.40.50.10810 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain 0.88 57.0 6.21e-01 81.6% 77.2%
1wp9A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.85 60.0 6.64e-01 89.4% 87.9%
1c4oA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.83 49.0 6.30e-01 89.4% 94.8%
3mwyW03 3.40.50.10810 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain 0.83 64.0 6.16e-01 97.1% 70.9%
1rifA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.81 59.0 6.64e-01 97.1% 94.3%
3dmqA04 3.40.50.10810 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain 0.80 58.0 5.32e-01 88.6% 58.9%
2ykgA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.80 36.0 5.46e-01 71.4% 97.2%
2z0mA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.80 57.0 6.42e-01 90.6% 92.7%
2yjtD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.79 47.0 5.61e-01 75.9% 84.7%
1oywA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.79 42.0 5.68e-01 70.6% 96.2%
1c4oA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 47.0 5.51e-01 76.3% 82.3%
4crwB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 46.0 5.75e-01 75.9% 90.5%
1xtiA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 46.0 5.57e-01 75.9% 86.0%
1z5zB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 45.0 5.65e-01 76.3% 89.7%
1hv8A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 46.0 5.82e-01 75.9% 94.0%
4a15A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 54.0 6.19e-01 81.6% 92.4%
4ljyA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 48.0 5.49e-01 75.9% 79.6%
1wp9A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 46.0 5.92e-01 75.5% 98.0%
5jajA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 57.0 5.63e-01 82.4% 71.6%
4nl4H03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 54.0 6.06e-01 89.4% 89.8%
3dkpA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 63.0 6.42e-01 97.1% 87.1%
2xgjB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 55.0 5.99e-01 100.0% 87.4%
5supC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 59.0 6.35e-01 92.2% 92.5%
6l5oA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 58.0 6.31e-01 89.8% 93.6%
8alzB05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 58.0 6.35e-01 92.7% 95.1%
5dcaA09 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 59.0 6.34e-01 92.7% 93.3%
6znpA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 61.0 6.52e-01 92.7% 96.2%
7clgB03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.74 46.0 4.95e-01 76.3% 71.1%
1z3iX01 3.40.50.10810 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain 0.73 63.0 6.05e-01 97.1% 78.3%
1m6nA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 45.0 5.37e-01 74.3% 86.8%
4zcfC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 59.0 5.88e-01 100.0% 79.9%
4xqkB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 58.0 6.12e-01 81.2% 94.2%
6x50A03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 57.0 6.13e-01 100.0% 92.9%
3rc3A04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 41.0 5.33e-01 76.3% 95.2%
3mwyW04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 48.0 4.65e-01 86.5% 61.0%
2o0jA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 53.0 5.31e-01 91.8% 72.8%
5agaA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 55.0 6.04e-01 89.4% 96.5%
4xjxA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 52.0 5.82e-01 82.4% 95.8%
7r7jA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 49.0 5.56e-01 81.2% 91.9%
6eudA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 46.0 5.53e-01 76.3% 97.1%
3dmnA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 41.0 5.07e-01 98.8% 90.1%
2gk6A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 53.0 5.13e-01 100.0% 72.1%
1gkuB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 54.0 5.81e-01 96.3% 94.4%
3v4rA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 59.0 5.90e-01 89.8% 95.5%
1pjrA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 50.0 5.53e-01 90.2% 94.1%
1yksA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 46.0 5.37e-01 78.4% 96.1%
1ofuX00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 34.0 4.68e-01 95.1% 100.0%
1nktA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 62.0 5.88e-01 100.0% 95.9%
4ceiB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 44.0 5.05e-01 75.9% 90.6%
7a8rA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 46.0 5.08e-01 76.3% 86.9%
3pvsB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 38.0 4.75e-01 82.4% 92.7%
4cbgD02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 42.0 5.17e-01 100.0% 100.0%
3upuA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 43.0 5.03e-01 91.4% 93.2%
8jx6B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 48.0 5.26e-01 91.0% 93.0%
4bgdA08 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 48.0 5.25e-01 76.3% 94.6%
6bogA05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 47.0 5.09e-01 75.9% 95.7%
2b8tA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 35.0 4.58e-01 100.0% 95.0%
4ydsA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 43.0 4.48e-01 98.4% 75.2%
3crvA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 53.0 5.30e-01 88.6% 92.3%
3jzmA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 44.0 4.48e-01 100.0% 72.2%
2ocaA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 46.0 4.96e-01 76.3% 91.3%
3e1sA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 46.0 4.94e-01 100.0% 88.7%
3vkhB07 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 43.0 4.89e-01 94.7% 93.1%
3upuA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 33.0 4.40e-01 94.3% 97.7%
8fazD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 45.0 4.68e-01 91.0% 80.1%
3hl0A01 3.40.50.1970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 37.0 4.49e-01 94.3% 92.5%
2orwB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 33.0 4.28e-01 70.6% 97.6%
5x7fA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 41.0 4.53e-01 95.1% 86.9%
5lb3B02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 45.0 4.71e-01 100.0% 85.1%
3czqC00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 42.0 4.06e-01 73.9% 88.0%
3om0A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 37.0 4.41e-01 72.7% 95.6%
7jgsE01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 41.0 4.74e-01 84.9% 100.0%
5l3qA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 40.0 4.38e-01 98.4% 85.0%
2qenA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 42.0 4.64e-01 87.3% 94.1%
3en0C00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.56 40.0 3.98e-01 78.4% 68.5%
4rh7A01 1.20.920.20 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › 0.54 48.0 4.11e-01 95.9% 85.7%
3io5A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 39.0 3.80e-01 96.7% 69.0%
2gzaB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 40.0 4.25e-01 98.4% 92.5%
2ewvA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 41.0 4.19e-01 85.7% 98.3%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5072656 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.94 65.0 6.58e-01 89.8% 71.2%
4032731 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.91 62.0 6.45e-01 86.9% 73.5%
4023184 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.89 66.0 4.86e-01 93.1% 33.0%
3793853 2004.1.1.24 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C 0.88 66.0 4.83e-01 96.3% 32.9%
4048100 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.88 66.0 5.70e-01 96.7% 53.0%
3625770 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.88 70.0 5.93e-01 100.0% 54.1%
4047967 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.87 65.0 5.70e-01 89.8% 55.3%
3932941 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.87 67.0 6.39e-01 96.7% 68.9%
4153562 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.87 67.0 6.73e-01 99.2% 77.6%
4943866 2004.1.1.120 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.86 59.0 4.16e-01 89.8% 26.5%
3473985 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.86 68.0 6.76e-01 100.0% 78.4%
3929438 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.86 66.0 6.29e-01 98.4% 69.1%
5055735 2004.1.1.120 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.86 60.0 6.18e-01 89.4% 73.6%
3214040 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.86 70.0 6.66e-01 100.0% 72.9%
3789868 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.86 64.0 6.61e-01 91.8% 79.1%
3901661 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.86 65.0 5.84e-01 92.2% 59.1%
3699145 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.86 63.0 6.12e-01 91.0% 68.7%
3715586 2004.1.1.24 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C 0.86 63.0 4.65e-01 91.0% 33.1%
4087465 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.86 65.0 5.91e-01 92.2% 61.0%
4828865 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.85 50.0 4.85e-01 70.6% 53.6%
3429073 2004.1.1.24 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C 0.85 63.0 4.84e-01 91.4% 37.7%
4879540 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.85 63.0 6.34e-01 97.1% 75.0%
3735883 2004.1.1.25 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C,SnAC 0.85 68.0 4.81e-01 100.0% 31.2%
3611439 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.85 67.0 5.77e-01 100.0% 55.8%
3283670 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.84 66.0 6.70e-01 100.0% 81.2%
4625018 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.84 61.0 6.38e-01 91.0% 78.7%
4001710 2004.1.1.24 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C 0.84 68.0 4.69e-01 99.2% 29.3%
None 0.84 68.0 4.68e-01 100.0% 28.3%
3744832 2004.1.1.24 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C 0.84 68.0 4.67e-01 100.0% 28.4%
4021009 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.83 73.0 6.54e-01 100.0% 68.8%
4022475 2004.1.1.629 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, Helicase_C, ResIII 0.83 68.0 4.76e-01 100.0% 30.6%
4936052 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.83 62.0 6.44e-01 91.4% 80.9%
5071742 2004.1.1.120 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.83 60.0 6.13e-01 82.4% 76.2%
3188539 2004.1.1.24 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C 0.83 73.0 5.11e-01 100.0% 33.1%
4379605 2004.1.1.468 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, DBINO 0.83 69.0 6.37e-01 100.0% 70.5%
5072107 2004.1.1.120 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.82 61.0 6.36e-01 91.0% 80.4%
3686390 2004.1.1.602 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, Helicase_C, HDA2-3, SnAC 0.82 68.0 4.72e-01 100.0% 29.8%
3734181 2004.1.1.428 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, Helicase_C, HDA2-3 0.82 65.0 4.61e-01 98.4% 31.0%
4022962 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.82 65.0 4.65e-01 98.4% 32.0%
3190566 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.82 65.0 6.26e-01 98.4% 73.0%
3467752 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.82 67.0 6.36e-01 92.2% 72.9%
3496639 2004.1.1.24 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C 0.82 68.0 4.95e-01 100.0% 35.1%
3364562 2004.1.1.120 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.82 58.0 5.75e-01 90.6% 68.1%
3427634 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.82 61.0 6.15e-01 98.4% 75.5%
3192285 2004.1.1.428 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, Helicase_C, HDA2-3 0.82 64.0 4.60e-01 97.6% 31.3%
3870948 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.82 68.0 4.56e-01 100.0% 26.5%
3255953 2004.1.1.24 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C 0.82 64.0 4.62e-01 91.8% 32.7%
3653891 2004.1.1.428 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, Helicase_C, HDA2-3 0.81 65.0 4.74e-01 95.9% 34.7%
3988710 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.81 68.0 6.77e-01 100.0% 83.6%
4013550 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.81 65.0 6.28e-01 97.1% 75.1%
3891289 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.81 64.0 6.31e-01 97.6% 76.2%
3208271 2004.1.1.24 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C 0.81 72.0 5.02e-01 100.0% 33.3%
3454862 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.80 65.0 5.97e-01 97.6% 67.0%
3496245 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.80 68.0 4.91e-01 100.0% 34.8%
3256179 2004.1.1.468 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, DBINO 0.80 67.0 5.46e-01 100.0% 51.0%
3335090 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.80 60.0 6.13e-01 95.9% 77.5%
5058709 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.80 68.0 6.41e-01 100.0% 75.1%
3378769 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.80 68.0 6.42e-01 100.0% 76.1%
3595199 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.80 65.0 5.88e-01 97.6% 64.8%
4000897 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.79 70.0 6.55e-01 96.3% 76.9%
3767759 2004.1.1.698 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, Helicase_C, ResIII, HDA2-3 0.79 68.0 4.89e-01 100.0% 35.4%
3252602 2004.1.1.24 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C 0.79 67.0 4.69e-01 92.2% 32.1%
3391852 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.79 65.0 5.96e-01 97.1% 68.7%
3175395 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.78 68.0 5.87e-01 100.0% 62.0%
5052258 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.78 61.0 4.40e-01 90.2% 32.7%
4179231 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.77 53.0 5.06e-01 89.8% 60.4%
3193473 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.77 68.0 6.43e-01 96.3% 77.9%
3740191 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.77 71.0 6.09e-01 100.0% 64.1%
3892448 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.77 68.0 5.46e-01 100.0% 51.5%
3692177 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.76 65.0 6.19e-01 97.1% 77.5%
4512904 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.76 54.0 5.95e-01 88.6% 87.5%
3668729 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.76 71.0 6.59e-01 100.0% 80.7%
3294586 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.76 68.0 5.98e-01 91.8% 69.4%
3999609 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.75 68.0 6.42e-01 94.3% 81.1%
3876764 2004.1.1.428 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, Helicase_C, HDA2-3 0.75 73.0 5.06e-01 100.0% 38.8%
4020589 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 72.0 6.38e-01 100.0% 74.8%
3561811 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 68.0 5.47e-01 100.0% 53.7%
3789283 2004.1.1.428 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, Helicase_C, HDA2-3 0.74 68.0 4.84e-01 100.0% 36.8%
3882016 2004.1.1.698 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, Helicase_C, ResIII, HDA2-3 0.74 72.0 4.93e-01 100.0% 35.7%
3598241 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 72.0 6.56e-01 100.0% 84.9%
3464471 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 48.0 5.84e-01 100.0% 98.1%
3638649 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.74 56.0 6.38e-01 90.2% 100.0%
3487278 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.73 59.0 5.58e-01 98.0% 70.7%
4142504 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.73 53.0 5.72e-01 88.2% 85.7%
3480984 2004.1.1.364 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.73 59.0 4.22e-01 98.0% 31.5%
3213433 2004.1.1.364 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.72 53.0 4.31e-01 89.8% 42.4%
3697032 2004.1.1.629 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, Helicase_C, ResIII 0.72 70.0 4.81e-01 100.0% 36.4%
None 0.72 69.0 5.55e-01 99.6% 62.1%
3649222 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.71 68.0 5.89e-01 100.0% 72.1%
3367832 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.71 66.0 4.52e-01 96.3% 33.2%
3620821 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 68.0 4.02e-01 100.0% 16.7%
3921813 2004.1.1.873 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, Helicase_C, ResIII, HDA2-3, SnAC 0.70 68.0 4.69e-01 100.0% 34.3%
3788293 2004.1.1.468 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, DBINO 0.70 68.0 6.09e-01 100.0% 76.9%
3308007 2004.1.1.24 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C 0.69 66.0 4.59e-01 100.0% 35.2%
3167404 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.69 66.0 5.57e-01 100.0% 65.1%
3742109 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.69 48.0 4.79e-01 98.8% 68.8%
4014869 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 65.0 5.64e-01 100.0% 76.5%
5008480 2004.1.1.233 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cas3-like_C_2 0.61 42.0 4.90e-01 76.3% 95.0%
3784944 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.52 49.0 4.36e-01 97.1% 94.5%
D2 medium residues 213-308_539-566
PDB
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1dq3A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.83 79.0 6.88e-01 100.0% 96.6%
4lx3A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.83 61.0 6.77e-01 96.8% 93.1%
2imzA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.83 78.0 7.45e-01 100.0% 97.2%
2lcjA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.82 77.0 6.65e-01 100.0% 96.8%
1zdeA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.82 77.0 7.00e-01 100.0% 89.4%
1mi8A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.81 77.0 7.35e-01 100.0% 92.9%
4o1sA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.80 76.0 6.73e-01 100.0% 94.1%
2cw8A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.80 75.0 6.69e-01 100.0% 96.4%
2lwyA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.80 76.0 7.27e-01 100.0% 93.5%
1am2A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.80 76.0 6.52e-01 100.0% 96.1%
1at0A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.79 75.0 7.05e-01 100.0% 94.5%
6zgqA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.77 72.0 6.77e-01 100.0% 97.3%
6vgwA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.75 71.0 6.74e-01 100.0% 94.3%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 27.0 3.42e-01 90.3% 76.5%
7zj3D01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.54 24.0 2.90e-01 97.6% 63.0%
3askA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 26.0 3.46e-01 99.2% 91.9%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 27.0 3.18e-01 91.9% 73.8%
2hrvA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 32.0 3.61e-01 94.4% 82.1%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4992473 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 84.0 7.35e-01 100.0% 88.2%
5030847 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 83.0 7.47e-01 100.0% 89.4%
5032319 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 82.0 7.63e-01 100.0% 95.3%
4667152 69.1.1.3 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT 0.86 82.0 7.45e-01 100.0% 91.1%
4565870 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 81.0 7.45e-01 100.0% 91.6%
4315406 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 81.0 7.02e-01 100.0% 97.2%
3257888 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 81.0 7.52e-01 100.0% 95.3%
4997597 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 81.0 7.51e-01 100.0% 93.3%
4993128 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 81.0 7.29e-01 100.0% 93.8%
4586920 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 80.0 7.38e-01 100.0% 95.5%
5028788 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 80.0 7.68e-01 100.0% 94.3%
4054994 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 79.0 6.98e-01 100.0% 92.9%
4779324 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 61.0 6.77e-01 96.8% 93.1%
5065032 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.83 79.0 7.09e-01 100.0% 96.4%
4997601 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 79.0 7.56e-01 100.0% 98.6%
4993732 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 74.0 7.43e-01 100.0% 92.0%
4993808 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 79.0 7.44e-01 100.0% 95.9%
4993927 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.83 78.0 7.26e-01 98.4% 100.0%
4170121 69.1.1.11 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT, Intein_splicing 0.83 78.0 6.93e-01 100.0% 95.9%
4993480 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 79.0 7.11e-01 100.0% 95.0%
4998394 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 77.0 7.06e-01 97.6% 97.4%
4982797 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.83 79.0 7.41e-01 100.0% 93.8%
4945569 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.82 78.0 7.17e-01 100.0% 92.9%
5023539 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.82 78.0 7.13e-01 100.0% 97.4%
3282306 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.82 78.0 7.52e-01 100.0% 95.6%
2445477 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.82 77.0 7.12e-01 100.0% 86.4%
5035476 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.82 78.0 7.04e-01 100.0% 94.4%
4872043 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 77.0 7.16e-01 100.0% 92.7%
4975971 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 77.0 7.60e-01 100.0% 96.9%
4978473 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 77.0 6.82e-01 100.0% 97.6%
4930433 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 76.0 7.00e-01 100.0% 94.8%
4993437 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 74.0 7.00e-01 96.0% 97.9%
3963364 69.1.1.3 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT 0.80 77.0 7.20e-01 100.0% 93.8%
4152516 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 77.0 7.42e-01 100.0% 97.8%
5030213 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.80 76.0 7.06e-01 100.0% 89.3%
4322985 2004.1.1.14 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU 0.80 76.0 5.28e-01 100.0% 36.1%
3602222 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 74.0 5.95e-01 99.2% 97.8%
4996401 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 75.0 6.77e-01 100.0% 95.0%
4993581 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.79 74.0 6.54e-01 100.0% 93.5%
3230518 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.78 74.0 6.77e-01 100.0% 94.2%
2701967 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.77 73.0 7.05e-01 100.0% 94.9%
5035795 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.77 72.0 6.83e-01 100.0% 94.5%
2636473 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.75 71.0 6.67e-01 100.0% 91.7%
4993871 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.75 62.0 6.44e-01 97.6% 93.0%
3259236 376.1.1.20 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.56 24.0 2.71e-01 97.6% 51.0%
D3 medium residues 309-411
PDB
D4 medium residues 412-538
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03161.19 best LAGLIDADG_2 40.6 3.60e-10 61.4% 40.8%
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3c0wA02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.85 61.0 6.80e-01 74.0% 90.3%
3hyiA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.80 51.0 4.39e-01 75.6% 42.9%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.74 52.0 5.55e-01 74.8% 82.9%
1b24A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.70 50.0 5.64e-01 81.9% 97.9%
8dy9I01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.64 54.0 4.58e-01 89.8% 86.4%
2cw8A03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.59 48.0 4.35e-01 85.8% 81.7%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.58 31.0 3.82e-01 78.0% 85.3%
2q7eA02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.57 40.0 3.41e-01 74.0% 90.6%
3islA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 39.0 3.97e-01 71.7% 82.0%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 37.0 4.09e-01 81.9% 88.0%
4qjvA01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.54 35.0 4.09e-01 82.7% 93.3%
2kyyA00 3.30.950.30 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Schlafen, AAA domain 0.54 38.0 3.57e-01 71.7% 69.3%
2f2eA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 35.0 3.99e-01 81.9% 92.3%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 36.0 4.18e-01 81.9% 97.8%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 34.0 3.84e-01 81.1% 88.2%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 34.0 3.97e-01 81.1% 100.0%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 35.0 3.82e-01 79.5% 86.1%
1z7uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 35.0 3.77e-01 81.9% 80.9%
2bv6A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 36.0 3.61e-01 83.5% 69.1%
5hs7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 35.0 3.83e-01 83.5% 89.8%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 36.0 3.85e-01 82.7% 87.6%
2v1nA01 1.10.10.2030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain 0.50 34.0 3.74e-01 81.9% 87.1%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 35.0 3.44e-01 81.9% 64.1%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4580823 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.89 61.0 6.34e-01 74.8% 74.2%
4155057 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.88 58.0 6.74e-01 74.0% 89.5%
3603234 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.88 63.0 6.84e-01 75.6% 85.5%
4505080 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.88 69.0 7.05e-01 81.9% 88.8%
4658611 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.86 59.0 6.70e-01 74.8% 89.0%
4373762 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.86 70.0 7.19e-01 83.5% 93.3%
2754912 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.85 62.0 6.70e-01 74.8% 87.0%
3251044 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.85 59.0 5.49e-01 75.6% 58.4%
3170512 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.85 60.0 6.51e-01 75.6% 83.6%
1827047 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.85 61.0 6.71e-01 74.8% 88.7%
3667726 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.84 57.0 6.38e-01 74.0% 87.0%
3604140 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.82 54.0 4.65e-01 74.8% 45.4%
4943246 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.82 53.0 5.99e-01 74.8% 84.0%
4997606 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.81 53.0 4.95e-01 75.6% 54.8%
4122798 242.1.1.6 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA 0.80 52.0 5.66e-01 75.6% 79.0%
5022297 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.80 55.0 6.36e-01 75.6% 94.7%
4979632 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.79 57.0 4.98e-01 75.6% 52.2%
4971399 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.78 56.0 6.05e-01 75.6% 85.5%
5030782 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.77 50.0 5.64e-01 72.4% 87.4%
4971295 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.76 54.0 6.11e-01 74.8% 96.8%
4972219 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.76 45.0 5.73e-01 73.2% 100.0%
4980064 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.76 55.0 4.98e-01 75.6% 65.9%
3602223 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.75 49.0 5.59e-01 75.6% 88.4%
4509301 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.74 56.0 5.17e-01 78.7% 78.8%
4575751 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.74 45.0 5.28e-01 74.8% 86.7%
1159602 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.74 52.0 5.53e-01 74.8% 82.1%
4395233 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.72 55.0 5.25e-01 79.5% 96.6%
4115001 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.72 55.0 5.46e-01 79.5% 99.2%
4999898 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.72 48.0 5.53e-01 73.2% 95.6%
5556 242.1.1.4 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › Endonuc_subdom 0.71 49.0 5.52e-01 79.5% 91.8%
5027649 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.71 53.0 5.44e-01 76.4% 82.5%
3738339 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.71 52.0 5.29e-01 76.4% 80.8%
3176794 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.71 55.0 5.37e-01 82.7% 97.9%
4237486 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.70 56.0 5.28e-01 85.0% 99.4%
3251478 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.70 55.0 5.54e-01 83.5% 98.5%
4979990 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.70 46.0 4.63e-01 73.2% 65.4%
5031915 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.69 43.0 5.09e-01 72.4% 92.9%
4962526 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.69 50.0 4.60e-01 75.6% 61.8%
4587247 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.69 45.0 5.17e-01 78.0% 93.3%
4993815 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.68 45.0 5.32e-01 78.0% 100.0%
4937053 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.67 48.0 5.29e-01 73.2% 95.0%
3602137 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.66 47.0 5.34e-01 78.7% 97.9%
5031484 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.66 44.0 5.03e-01 71.7% 95.6%
4937023 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.65 48.0 5.37e-01 78.0% 100.0%
4500961 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.65 42.0 4.95e-01 73.2% 96.5%
5009157 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.64 47.0 5.00e-01 78.0% 88.2%
5041345 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.59 36.0 4.44e-01 70.1% 98.8%
3275539 206.1.1.49 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF5898 0.58 44.0 3.50e-01 78.0% 64.7%
3274720 206.1.1.49 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF5898 0.58 43.0 3.65e-01 77.2% 73.5%
3948373 304.8.1.69 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › YejG 0.57 39.0 4.23e-01 70.9% 97.2%
4806427 206.1.1.10 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase 0.56 45.0 3.16e-01 84.3% 84.9%
3939929 206.1.1.10 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase 0.56 44.0 3.11e-01 83.5% 77.9%
1109306 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.55 35.0 3.87e-01 82.7% 82.7%
3833385 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.54 41.0 3.89e-01 80.3% 80.7%
4325812 11.1.5.85 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PFF1_C 0.53 38.0 3.04e-01 72.4% 85.7%
3265969 206.1.1.49 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF5898 0.53 39.0 3.61e-01 75.6% 66.9%
3186329 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.52 40.0 4.12e-01 89.8% 84.2%
3709371 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.52 41.0 3.36e-01 84.3% 89.4%
3925737 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.51 40.0 3.93e-01 81.9% 100.0%
3947367 206.1.1.35 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH_6_hur 0.51 40.0 3.14e-01 84.3% 84.6%
D5 medium residues 610-666
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 45.0 3.78e-01 89.5% 84.0%
3go5A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 35.0 3.18e-01 71.9% 43.0%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 45.0 4.01e-01 91.2% 94.4%
2mh9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 46.0 3.60e-01 91.2% 59.8%
1fpqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 40.0 3.25e-01 82.5% 80.6%
1kyzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 41.0 3.46e-01 82.5% 77.7%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 41.0 3.35e-01 86.0% 66.7%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.53e-01 89.5% 86.4%
2qbyA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.70e-01 91.2% 68.9%
3e07A00 2.10.90.10 Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines 0.53 35.0 3.13e-01 70.2% 97.8%
3ty2A00 3.40.1210.10 Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase 0.52 36.0 2.48e-01 75.4% 52.8%
1p65A00 6.10.140.90 Special › Helix non-globular › Helix Hairpins › 0.52 40.0 4.08e-01 98.2% 96.5%
4i62A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 43.0 3.30e-01 98.2% 79.9%
2v79A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 36.0 2.98e-01 75.4% 60.9%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3681549 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.74 64.0 4.13e-01 100.0% 21.5%
4995767 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.70 63.0 4.00e-01 100.0% 22.2%
5051534 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 46.0 3.30e-01 82.5% 48.1%
3480534 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 48.0 3.79e-01 86.0% 65.0%
3518019 101.1.2.111 alpha arrays › HTH › HTH › winged helix domain › RQC 0.60 49.0 3.75e-01 93.0% 64.3%
3214114 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 43.0 3.09e-01 84.2% 25.5%
3948759 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.56 39.0 2.63e-01 77.2% 85.0%
4998593 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.55 43.0 3.53e-01 89.5% 50.4%
3249715 101.1.2.111 alpha arrays › HTH › HTH › winged helix domain › RQC 0.55 41.0 3.35e-01 86.0% 64.0%
4943742 2484.1.1.232 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › EutA 0.55 39.0 3.17e-01 91.2% 37.5%
4294089 190.1.1.7 alpha arrays › HMG-box-like › HMG-box › HMG-box › MATalpha_HMGbox 0.54 43.0 3.44e-01 96.5% 57.9%
3200582 101.1.2.111 alpha arrays › HTH › HTH › winged helix domain › RQC 0.54 40.0 3.34e-01 87.7% 60.8%
3685895 189.1.1.2 alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RhoGAP 0.53 42.0 2.86e-01 94.7% 24.2%
4795495 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.53 39.0 3.41e-01 84.2% 85.9%
3740624 101.1.2.111 alpha arrays › HTH › HTH › winged helix domain › RQC 0.53 39.0 3.23e-01 86.0% 64.0%
3587894 101.1.2.49 alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C 0.53 44.0 3.20e-01 98.2% 49.1%
3998938 6110.1.1.1 alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 0.51 41.0 2.49e-01 100.0% 18.2%
5040104 2500.1.1.2 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.50 39.0 2.40e-01 98.2% 55.1%
3326456 2484.1.1.2 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.50 40.0 2.57e-01 100.0% 42.9%
D6 medium residues 678-758
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4dsfA04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.58 41.0 3.76e-01 75.3% 67.3%
3py8A04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.57 40.0 3.38e-01 74.1% 52.1%
4xviA01 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.56 40.0 3.44e-01 79.0% 52.1%
7pbkB02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.54 37.0 3.21e-01 71.6% 67.4%
3wkyA02 1.10.1280.10 Mainly Alpha › Orthogonal Bundle › di-copper center containing domain from catechol oxidase › Di-copper center containing domain from catechol oxidase 0.54 48.0 3.30e-01 100.0% 59.1%
1llaA03 1.10.1280.10 Mainly Alpha › Orthogonal Bundle › di-copper center containing domain from catechol oxidase › Di-copper center containing domain from catechol oxidase 0.53 47.0 3.31e-01 100.0% 61.6%
1gmuA01 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.53 29.0 3.20e-01 82.7% 65.7%
2ctdA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.51 33.0 3.18e-01 75.3% 55.2%
1xa3A01 3.40.50.10540 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.50 35.0 2.46e-01 74.1% 65.3%
4xr7F02 1.10.287.3700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.50 35.0 3.45e-01 88.9% 66.7%
1irxA05 1.10.10.350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.50 31.0 2.96e-01 96.3% 53.8%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3581048 4964.1.1.1 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A 0.58 42.0 3.48e-01 79.0% 48.4%
3304137 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 44.0 4.21e-01 91.4% 81.0%
4466618 1128.1.1.0 alpha bundles › LYR protein › LYR protein › LYR protein 0.55 39.0 3.86e-01 75.3% 69.4%
None 0.53 47.0 3.31e-01 100.0% 61.2%
3390755 146.1.1.0 alpha arrays › Di-copper centre-containing domain › Di-copper centre-containing domain › Di-copper centre-containing domain 0.53 46.0 2.84e-01 100.0% 30.2%
4016140 620.1.1.4 alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DUF1993 0.52 38.0 3.12e-01 82.7% 73.7%
3471523 3877.1.1.0 alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC 0.51 37.0 2.57e-01 77.8% 27.6%
3228279 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.50 42.0 2.42e-01 95.1% 93.0%
3585116 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.50 39.0 2.89e-01 86.4% 82.6%