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SR-VP_4-6_scaffold_141_3489769_prodigal-single.1__X__X__00305
Bact-VirSR-VP_4-6_scaffold_141_3489769_prodigal-single.1__X__X__00305
Identity
- Kingdom:
- phage
Quality
75.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 35-150
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dkkA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.64 | 38.0 | 4.56e-01 | 83.6% | 91.9% |
| 2l2nA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 37.0 | 4.42e-01 | 85.3% | 100.0% |
| 1whqA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 37.0 | 4.41e-01 | 82.8% | 100.0% |
| 1pu4A03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.60 | 44.0 | 3.05e-01 | 78.4% | 93.4% |
| 1ekzA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 36.0 | 4.22e-01 | 84.5% | 90.8% |
| 2jobA00 | 3.30.160.320 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 40.0 | 4.30e-01 | 82.8% | 79.4% |
| 2gr7A00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.58 | 31.0 | 3.38e-01 | 80.2% | 59.4% |
| 1nhpA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.56 | 38.0 | 3.88e-01 | 88.8% | 69.9% |
| 4zv9A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 48.0 | 3.82e-01 | 94.0% | 79.0% |
| 3ci0I00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.56 | 33.0 | 3.83e-01 | 72.4% | 80.7% |
| 2c1iA01 | 3.30.565.50 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › | 0.55 | 42.0 | 4.32e-01 | 82.8% | 83.8% |
| 3otlA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 44.0 | 4.05e-01 | 87.9% | 73.9% |
| 2cduA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.54 | 36.0 | 3.69e-01 | 87.9% | 69.0% |
| 3cgbA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.54 | 37.0 | 3.79e-01 | 90.5% | 72.7% |
| 4fx9A03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.54 | 36.0 | 3.64e-01 | 87.9% | 69.0% |
| 2mcfA00 | 3.40.50.11630 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 47.0 | 4.40e-01 | 98.3% | 85.1% |
| 4d8pB01 | 3.10.320.10 | Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 | 0.53 | 32.0 | 3.44e-01 | 94.0% | 66.7% |
| 3nvqA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 40.0 | 2.74e-01 | 79.3% | 36.9% |
| 3bdrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 42.0 | 3.89e-01 | 88.8% | 94.9% |
| 1yqzA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.52 | 35.0 | 3.60e-01 | 90.5% | 73.1% |
| 1l7aA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 45.0 | 3.35e-01 | 98.3% | 72.0% |
| 1kfiA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.51 | 40.0 | 3.92e-01 | 83.6% | 89.6% |
| 3m05B01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 35.0 | 3.89e-01 | 89.7% | 90.2% |
| 2x8fA02 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 38.0 | 4.10e-01 | 78.4% | 100.0% |
| 2xzmE01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.50 | 35.0 | 3.55e-01 | 81.0% | 71.6% |
| 8gq6A01 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.50 | 38.0 | 2.91e-01 | 81.0% | 83.8% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3492710 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.74 | 42.0 | 5.46e-01 | 92.2% | 100.0% |
| 5038844 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.66 | 44.0 | 5.08e-01 | 87.1% | 97.5% |
| 4330018 | 330.1.1.6 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Staufen_C | 0.64 | 40.0 | 4.77e-01 | 87.1% | 97.3% |
| 5042338 | 7504.1.1.2 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T | 0.63 | 52.0 | 4.69e-01 | 87.9% | 94.8% |
| 3711062 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.62 | 43.0 | 4.57e-01 | 87.9% | 82.0% |
| 4416182 | 241.15.1.3 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 | 0.61 | 50.0 | 5.29e-01 | 96.6% | 97.1% |
| 5069135 | 7504.1.1.2 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T | 0.61 | 51.0 | 4.36e-01 | 88.8% | 88.6% |
| 4116893 | 7504.1.1.2 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T | 0.61 | 51.0 | 4.53e-01 | 91.4% | 95.9% |
| 5066042 | 330.2.1.5 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 | 0.61 | 44.0 | 4.79e-01 | 96.6% | 93.7% |
| 4299287 | 7504.1.1.2 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T | 0.61 | 51.0 | 4.50e-01 | 92.2% | 94.9% |
| 3492440 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.60 | 40.0 | 3.93e-01 | 87.1% | 62.4% |
| 3495949 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.60 | 38.0 | 4.22e-01 | 89.7% | 83.3% |
| 4971937 | 7504.1.1.2 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T | 0.59 | 49.0 | 4.35e-01 | 88.8% | 96.4% |
| 4576687 | 7504.1.1.2 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T | 0.59 | 49.0 | 4.28e-01 | 90.5% | 93.3% |
| 5000180 | 7504.1.1.2 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T | 0.58 | 45.0 | 4.08e-01 | 83.6% | 93.3% |
| 3797650 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.58 | 37.0 | 3.99e-01 | 81.0% | 76.0% |
| 3697317 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.57 | 38.0 | 4.26e-01 | 83.6% | 87.8% |
| 3794870 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.57 | 47.0 | 4.26e-01 | 91.4% | 94.4% |
| 3230598 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.56 | 48.0 | 4.42e-01 | 92.2% | 97.3% |
| 3653604 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.55 | 46.0 | 4.17e-01 | 90.5% | 74.2% |
| 3928618 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.55 | 37.0 | 3.89e-01 | 87.9% | 76.2% |
| 4464658 | 274.1.1.59 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGG | 0.55 | 33.0 | 3.40e-01 | 84.5% | 60.5% |
| 3897847 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.53 | 45.0 | 4.01e-01 | 93.1% | 93.5% |
| 2878158 | 243.1.1.8 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MlaC | 0.53 | 37.0 | 3.33e-01 | 72.4% | 83.7% |
| 5023892 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.52 | 43.0 | 4.18e-01 | 91.4% | 87.6% |
| 3572755 | 330.1.1.6 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Staufen_C | 0.52 | 40.0 | 4.08e-01 | 82.8% | 89.6% |
| 5004264 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.52 | 43.0 | 4.32e-01 | 94.0% | 93.5% |
| 3564163 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 42.0 | 2.83e-01 | 86.2% | 98.8% |
| 3961427 | 4321.1.1.1 ↗ | a+b two layers › Peptidoglycan deacetylase N-terminal noncatalytic region › Peptidoglycan deacetylase N-terminal noncatalytic region › Peptidoglycan deacetylase N-terminal noncatalytic region › DUF3298 | 0.52 | 43.0 | 3.55e-01 | 90.5% | 75.7% |
| 4014366 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.51 | 42.0 | 3.09e-01 | 93.1% | 85.8% |
| 3507047 | 244.4.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit | 0.51 | 38.0 | 4.11e-01 | 80.2% | 91.0% |
| 3614740 | 3794.1.1.0 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit | 0.51 | 37.0 | 3.57e-01 | 74.1% | 83.8% |
| 1790370 | 5.1.2.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_130 | 0.51 | 42.0 | 3.08e-01 | 90.5% | 83.9% |
| 4962934 | 331.2.1.15 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › DUF7845 | 0.51 | 40.0 | 3.66e-01 | 85.3% | 89.4% |
| 3626173 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 38.0 | 2.77e-01 | 80.2% | 38.5% |
D2
high
residues 164-221
Domain cluster:
representative
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gwcA00 | 3.30.590.20 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › | 0.70 | 61.0 | 3.63e-01 | 100.0% | 13.0% |
| 2gu1A01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 50.0 | 4.40e-01 | 81.0% | 70.5% |
| 1p5dX04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.67 | 57.0 | 4.98e-01 | 100.0% | 64.5% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.66 | 52.0 | 4.86e-01 | 98.3% | 70.8% |
| 5mu3B00 | 3.40.50.12050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.66 | 56.0 | 4.07e-01 | 96.6% | 46.6% |
| 2kafA00 | 3.40.30.150 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Coronavirus polyprotein cleavage domain | 0.64 | 47.0 | 4.52e-01 | 79.3% | 80.6% |
| 2da0A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 43.0 | 3.50e-01 | 70.7% | 85.1% |
| 1v8cA02 | 3.30.1370.80 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain | 0.64 | 57.0 | 5.13e-01 | 100.0% | 73.8% |
| 4czxA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 48.0 | 3.00e-01 | 82.8% | 21.6% |
| 2f7lA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.63 | 53.0 | 4.77e-01 | 100.0% | 67.1% |
| 2lexA00 | 2.20.25.80 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain | 0.63 | 50.0 | 4.91e-01 | 86.2% | 96.8% |
| 3b77A01 | 2.30.29.50 | Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain | 0.63 | 46.0 | 3.88e-01 | 79.3% | 54.0% |
| 1genA00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.62 | 46.0 | 3.18e-01 | 79.3% | 23.5% |
| 3vn5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.62 | 50.0 | 4.78e-01 | 98.3% | 76.8% |
| 4hjhA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.61 | 53.0 | 4.49e-01 | 100.0% | 75.2% |
| 4hl9A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 47.0 | 4.08e-01 | 100.0% | 53.2% |
| 3fcdB00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.60 | 44.0 | 3.54e-01 | 79.3% | 40.3% |
| 1n7vA03 | 2.70.250.10 | Mainly Beta › Distorted Sandwich › receptor-binding protein prd1-p2, domain 3 › receptor-binding protein prd1-p2, domain 3 | 0.60 | 36.0 | 2.43e-01 | 87.9% | 14.7% |
| 3c1aA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.60 | 43.0 | 3.38e-01 | 81.0% | 87.6% |
| 7uhyA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 46.0 | 2.95e-01 | 86.2% | 25.2% |
| 3cxbA01 | 3.30.2440.10 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein SifA fold › Secreted effector protein SifA | 0.59 | 44.0 | 3.56e-01 | 81.0% | 56.5% |
| 3dtyB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.58 | 45.0 | 3.32e-01 | 91.4% | 73.0% |
| 1nrkA01 | 3.30.70.1630 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 42.0 | 3.65e-01 | 98.3% | 48.5% |
| 1q8mA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 48.0 | 3.88e-01 | 100.0% | 51.2% |
| 2xzhA00 | 2.130.10.110 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain | 0.56 | 45.0 | 2.79e-01 | 87.9% | 33.2% |
| 3oajA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 42.0 | 3.30e-01 | 86.2% | 84.7% |
| 7apkF01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 44.0 | 2.86e-01 | 94.8% | 21.6% |
| 3omzA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 46.0 | 3.95e-01 | 100.0% | 57.8% |
| 3d01E00 | 3.30.1330.40 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like | 0.55 | 45.0 | 3.47e-01 | 100.0% | 70.3% |
| 4by6C00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.55 | 39.0 | 2.93e-01 | 81.0% | 34.1% |
| 1v5rA00 | 3.30.920.20 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Gas2-like domain | 0.55 | 41.0 | 3.62e-01 | 87.9% | 87.6% |
| 1rxxC01 | 3.75.10.10 | Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A | 0.54 | 40.0 | 2.52e-01 | 81.0% | 76.5% |
| 6ko5A02 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.53 | 39.0 | 2.54e-01 | 79.3% | 65.4% |
| 1q47A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 44.0 | 2.64e-01 | 96.6% | 15.1% |
| 7vjvA01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.53 | 41.0 | 2.92e-01 | 89.7% | 80.7% |
| 3jbtA05 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 42.0 | 2.69e-01 | 94.8% | 22.0% |
| 5aj3P00 | 3.30.1320.10 | Alpha Beta › 2-Layer Sandwich › S16 Ribosomal Protein; Chain: A; › Ribosomal protein S16 | 0.52 | 37.0 | 3.10e-01 | 77.6% | 66.7% |
| 1h4rA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 37.0 | 3.23e-01 | 75.9% | 100.0% |
| 2xcmC00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 35.0 | 3.12e-01 | 72.4% | 89.1% |
| 3exzB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 37.0 | 2.86e-01 | 79.3% | 78.9% |
| 4ffuB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 36.0 | 2.77e-01 | 75.9% | 75.3% |
| 4hhvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 35.0 | 3.08e-01 | 75.9% | 93.2% |
| 2h7fX02 | 3.90.15.10 | Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 | 0.51 | 35.0 | 2.38e-01 | 74.1% | 33.6% |
| 3bpvA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 38.0 | 2.96e-01 | 87.9% | 34.3% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3939178 | 304.48.1.37 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_2 | 0.82 | 62.0 | 4.31e-01 | 100.0% | 25.4% |
| 3175055 | 304.48.1.37 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_2 | 0.78 | 61.0 | 3.90e-01 | 100.0% | 18.5% |
| 4028473 | 331.23.1.7 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › CPSF73-100_C | 0.75 | 63.0 | 5.75e-01 | 100.0% | 70.7% |
| 4956687 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.72 | 60.0 | 5.38e-01 | 100.0% | 66.3% |
| 5035567 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.71 | 56.0 | 5.31e-01 | 86.2% | 79.7% |
| 3295308 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.71 | 62.0 | 3.96e-01 | 100.0% | 20.4% |
| 4939738 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.69 | 61.0 | 5.41e-01 | 100.0% | 70.6% |
| 5030737 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.69 | 60.0 | 5.25e-01 | 100.0% | 67.8% |
| 1184376 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.68 | 60.0 | 5.07e-01 | 100.0% | 61.9% |
| 3606702 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.68 | 54.0 | 3.40e-01 | 87.9% | 25.0% |
| 4938317 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.67 | 59.0 | 5.22e-01 | 100.0% | 75.3% |
| 4937199 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.67 | 58.0 | 5.11e-01 | 100.0% | 65.9% |
| 4947124 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.67 | 59.0 | 5.21e-01 | 100.0% | 70.6% |
| 4978863 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.67 | 59.0 | 5.03e-01 | 100.0% | 64.2% |
| 3600224 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 53.0 | 3.11e-01 | 87.9% | 81.0% |
| 4027435 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.66 | 49.0 | 3.24e-01 | 82.8% | 30.2% |
| 4975323 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.66 | 55.0 | 4.81e-01 | 100.0% | 61.1% |
| 5025662 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.66 | 58.0 | 5.20e-01 | 98.3% | 77.5% |
| 4990493 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.65 | 48.0 | 4.34e-01 | 100.0% | 56.5% |
| 3410220 | 5.1.4.218 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT80_2nd | 0.64 | 49.0 | 3.15e-01 | 84.5% | 21.4% |
| 5054695 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.63 | 53.0 | 4.86e-01 | 100.0% | 70.0% |
| 4332725 | 295.1.1.2 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › SsgA | 0.63 | 41.0 | 3.17e-01 | 72.4% | 30.0% |
| 4966684 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.62 | 42.0 | 4.21e-01 | 98.3% | 68.3% |
| 3427055 | 5.1.11.13 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta-prop_RIC1_2nd | 0.62 | 53.0 | 3.00e-01 | 98.3% | 57.7% |
| 3514010 | 5.1.4.218 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT80_2nd | 0.62 | 46.0 | 2.99e-01 | 82.8% | 19.3% |
| 4014124 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 45.0 | 2.80e-01 | 81.0% | 65.4% |
| 3786015 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.60 | 47.0 | 2.67e-01 | 87.9% | 8.1% |
| 3711659 | 5.1.4.218 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT80_2nd | 0.60 | 44.0 | 2.88e-01 | 82.8% | 19.0% |
| 3724603 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.59 | 48.0 | 2.93e-01 | 93.1% | 30.4% |
| 3479152 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 46.0 | 2.87e-01 | 86.2% | 23.0% |
| 4381919 | 5.1.4.62 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN | 0.59 | 45.0 | 2.74e-01 | 82.8% | 20.3% |
| 4012450 | 4.1.1.107 ↗ | beta barrels › SH3 › SH3 › SH3 › XRN1_D1 | 0.59 | 41.0 | 2.90e-01 | 72.4% | 31.4% |
| 4533388 | 219.1.1.122 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PF28648 | 0.59 | 43.0 | 2.95e-01 | 81.0% | 83.1% |
| 3989307 | 220.1.1.88 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF956 | 0.58 | 39.0 | 3.24e-01 | 70.7% | 45.5% |
| 4079675 | 4959.1.1.1 ↗ | a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_3 | 0.57 | 42.0 | 3.47e-01 | 79.3% | 42.2% |
| 5019195 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.57 | 50.0 | 3.33e-01 | 100.0% | 40.8% |
| 3252112 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 41.0 | 3.34e-01 | 79.3% | 93.3% |
| 3668366 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.56 | 46.0 | 3.07e-01 | 94.8% | 44.6% |
| 4028996 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 39.0 | 2.85e-01 | 72.4% | 54.5% |
| 3792452 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.56 | 46.0 | 2.92e-01 | 94.8% | 23.7% |
| 3577910 | 220.1.1.157 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF29715 | 0.56 | 43.0 | 3.63e-01 | 86.2% | 58.1% |
| 5028032 | 331.1.1.1 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP | 0.56 | 45.0 | 4.10e-01 | 98.3% | 64.7% |
| 3700337 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.55 | 41.0 | 2.79e-01 | 81.0% | 77.3% |
| None | — | 0.55 | 42.0 | 3.24e-01 | 87.9% | 43.6% | |
| 3631256 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.54 | 43.0 | 2.70e-01 | 91.4% | 22.1% |
| 3487226 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 41.0 | 3.67e-01 | 84.5% | 94.1% |
| 3722216 | 220.1.1.70 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_5 | 0.53 | 42.0 | 3.20e-01 | 93.1% | 99.4% |
| 3364335 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.52 | 42.0 | 3.07e-01 | 89.7% | 40.6% |
| 3886048 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.52 | 41.0 | 3.10e-01 | 89.7% | 43.5% |
| 3781009 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 41.0 | 2.75e-01 | 93.1% | 30.9% |
| 4112955 | 304.107.1.1 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T | 0.51 | 41.0 | 2.89e-01 | 100.0% | 71.2% |
| 4384861 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.51 | 43.0 | 2.70e-01 | 96.6% | 64.3% |
| 138326 | 101.1.8.2 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Topoisom_I | 0.50 | 35.0 | 2.70e-01 | 74.1% | 56.1% |
| 4948242 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 37.0 | 2.89e-01 | 84.5% | 48.0% |
| 4267063 | 304.107.1.0 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain | 0.50 | 40.0 | 2.85e-01 | 100.0% | 66.4% |