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SR-VP_4-6_scaffold_141_4086954_prodigal-single.1__X__X__00067
Bact-VirSR-VP_4-6_scaffold_141_4086954_prodigal-single.1__X__X__00067
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 47-97_678-808_825-859
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3foaB01 | 3.40.50.11780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.74 | 66.0 | 6.58e-01 | 92.6% | 90.0% |
| 1to6A01 | 3.40.50.10350 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycerate kinase; domain 1 | 0.62 | 40.0 | 4.87e-01 | 80.2% | 99.3% |
| 2ocdA02 | 3.40.50.40 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 35.0 | 4.47e-01 | 77.0% | 100.0% |
| 4k7jA01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.58 | 41.0 | 4.05e-01 | 70.0% | 84.5% |
| 1e8cB03 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.58 | 32.0 | 3.82e-01 | 77.9% | 78.9% |
| 4impA02 | 3.40.50.11460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 47.0 | 4.77e-01 | 94.9% | 86.7% |
| 5l9aB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 49.0 | 4.28e-01 | 90.8% | 88.7% |
| 3r7wA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 43.0 | 4.64e-01 | 77.9% | 99.5% |
| 4ldpA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.55 | 35.0 | 4.01e-01 | 95.9% | 84.0% |
| 4xvhA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.55 | 43.0 | 4.27e-01 | 80.6% | 100.0% |
| 1bwpA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.55 | 40.0 | 4.11e-01 | 75.6% | 88.7% |
| 1xmxA02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.54 | 37.0 | 4.39e-01 | 80.6% | 100.0% |
| 4impA03 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 42.0 | 3.99e-01 | 80.6% | 84.0% |
| 2ydyA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 48.0 | 4.52e-01 | 94.9% | 91.5% |
| 2hsjD00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.53 | 38.0 | 3.91e-01 | 73.3% | 86.0% |
| 1tpzA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 41.0 | 4.47e-01 | 80.2% | 100.0% |
| 3vhrA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 41.0 | 4.10e-01 | 81.1% | 89.2% |
| 5icsF00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 45.0 | 4.22e-01 | 90.3% | 94.9% |
| 1hxhA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 46.0 | 4.34e-01 | 92.6% | 97.6% |
| 1f2dA01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 40.0 | 4.00e-01 | 79.7% | 79.0% |
| 6eudA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 31.0 | 3.43e-01 | 76.5% | 73.5% |
| 3wrwA02 | 3.40.50.12030 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Uncharacterised protein family UPF0261, NC domain | 0.51 | 39.0 | 3.97e-01 | 79.7% | 100.0% |
| 3vzpC00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 42.0 | 4.11e-01 | 87.6% | 95.9% |
| 6oibA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 33.0 | 3.82e-01 | 85.7% | 90.7% |
| 4q9aA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.51 | 41.0 | 4.11e-01 | 83.9% | 96.3% |
| 4exbB00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.51 | 36.0 | 3.44e-01 | 77.9% | 60.8% |
| 3ksuB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 44.0 | 4.44e-01 | 92.6% | 98.2% |
| 2bfwA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.50 | 37.0 | 4.01e-01 | 97.7% | 87.3% |
| 3pvzB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 46.0 | 4.09e-01 | 97.7% | 76.7% |
| 3lqkA00 | 3.40.50.1950 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like | 0.50 | 42.0 | 4.47e-01 | 92.6% | 99.5% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995822 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.86 | 84.0 | 7.80e-01 | 98.6% | 88.2% |
| 4888782 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.84 | 82.0 | 7.40e-01 | 100.0% | 91.0% |
| 2832219 | 2499.2.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 | 0.83 | 79.0 | 6.47e-01 | 98.6% | 86.2% |
| 5004680 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.82 | 78.0 | 7.08e-01 | 97.7% | 85.5% |
| 4882286 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.82 | 56.0 | 6.79e-01 | 72.8% | 100.0% |
| 3978226 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.80 | 76.0 | 6.83e-01 | 97.7% | 85.7% |
| 4889792 | 2499.2.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 | 0.79 | 70.0 | 6.97e-01 | 99.1% | 90.0% |
| 1518917 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.77 | 73.0 | 6.66e-01 | 97.7% | 82.8% |
| 2468538 | 2499.2.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 | 0.77 | 73.0 | 6.84e-01 | 98.6% | 90.7% |
| 3944167 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.76 | 72.0 | 6.55e-01 | 97.2% | 83.3% |
| 3164915 | 3019.1.1.11 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Phage_sheath_1 | 0.72 | 65.0 | 6.47e-01 | 97.2% | 90.7% |
| 4947541 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.65 | 42.0 | 4.95e-01 | 85.3% | 92.7% |
| 5000765 | 2006.1.6.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 | 0.62 | 44.0 | 4.43e-01 | 71.9% | 85.7% |
| 1030945 | 2008.1.1.34 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Card1_endonuc | 0.59 | 37.0 | 4.64e-01 | 72.4% | 100.0% |
| 4955563 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.58 | 36.0 | 3.95e-01 | 90.3% | 74.3% |
| 3719711 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.57 | 36.0 | 4.34e-01 | 74.2% | 91.3% |
| 4962365 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.57 | 51.0 | 4.49e-01 | 95.4% | 91.1% |
| 3285907 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.56 | 44.0 | 4.14e-01 | 80.2% | 97.7% |
| 2142142 | 2003.1.1.72 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDP_Man_Dehyd | 0.55 | 49.0 | 4.32e-01 | 94.9% | 92.3% |
| 3744600 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.55 | 47.0 | 4.18e-01 | 90.3% | 95.5% |
| 161484 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.54 | 49.0 | 4.22e-01 | 95.4% | 92.7% |
| 3616139 | 2006.1.6.32 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › vWA_Ro60 | 0.54 | 39.0 | 4.29e-01 | 72.8% | 92.0% |
| 4998956 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.54 | 48.0 | 4.29e-01 | 95.4% | 92.1% |
| 3388478 | 2007.9.1.9 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › PF29907 | 0.54 | 40.0 | 4.23e-01 | 75.6% | 95.8% |
| 3804437 | 2005.1.1.41 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_C | 0.54 | 29.0 | 3.25e-01 | 75.6% | 63.4% |
| 4962645 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.54 | 43.0 | 4.25e-01 | 83.4% | 97.8% |
| 5003161 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 35.0 | 3.50e-01 | 84.8% | 63.2% |
| 4007584 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.53 | 38.0 | 4.15e-01 | 98.2% | 87.8% |
| 3356490 | 2007.9.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR | 0.53 | 38.0 | 4.26e-01 | 80.6% | 95.2% |
| 3318301 | 2007.9.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR | 0.52 | 38.0 | 4.25e-01 | 80.2% | 94.7% |
| 3395439 | 2003.1.1.80 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › FAS_pseudo-KR | 0.52 | 26.0 | 3.63e-01 | 79.3% | 100.0% |
| None | — | 0.52 | 45.0 | 4.07e-01 | 89.9% | 96.5% | |
| 1200114 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.52 | 43.0 | 4.07e-01 | 87.1% | 83.1% |
| 4011439 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.52 | 46.0 | 4.43e-01 | 94.0% | 96.3% |
| 5064420 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.52 | 36.0 | 3.60e-01 | 88.9% | 67.6% |
| 3789209 | 2003.1.1.93 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DUF1776 | 0.51 | 45.0 | 3.76e-01 | 93.1% | 85.4% |
| None | — | 0.51 | 45.0 | 4.31e-01 | 92.6% | 93.5% | |
| 4289517 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.51 | 45.0 | 4.09e-01 | 94.5% | 99.6% |
D2
high
residues 105-112_198-365
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4feiA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 27.0 | 3.34e-01 | 96.0% | 74.5% |
| 6rupA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 24.0 | 3.00e-01 | 85.8% | 64.0% |
| 1yliB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 31.0 | 3.38e-01 | 93.2% | 67.6% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3500564 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.61 | 29.0 | 3.66e-01 | 97.7% | 73.3% |
| 3880605 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.58 | 27.0 | 3.52e-01 | 91.5% | 78.9% |
| 3930136 | 922.1.1.1 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP_1 | 0.53 | 19.0 | 3.09e-01 | 72.7% | 92.7% |
| 3993341 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.53 | 26.0 | 3.60e-01 | 87.5% | 96.5% |
| 3625905 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.52 | 26.0 | 2.84e-01 | 71.0% | 54.7% |
D3
high
residues 115-195
Domain cluster:
representative
CATH (74)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kh8B01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.72 | 58.0 | 4.59e-01 | 100.0% | 44.8% |
| 3e1eC00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.71 | 51.0 | 4.21e-01 | 100.0% | 43.3% |
| 4k02A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.68 | 52.0 | 4.43e-01 | 100.0% | 51.2% |
| 2gvhC01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.65 | 49.0 | 4.13e-01 | 100.0% | 47.8% |
| 5i8fA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.65 | 55.0 | 4.38e-01 | 93.8% | 76.2% |
| 3lydA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.64 | 53.0 | 4.45e-01 | 91.4% | 63.4% |
| 1m6kA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.63 | 55.0 | 3.86e-01 | 95.1% | 86.4% |
| 4r7kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.63 | 52.0 | 4.15e-01 | 91.4% | 72.6% |
| 6oodA01 | 2.40.480.10 | Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like | 0.63 | 49.0 | 4.03e-01 | 84.0% | 100.0% |
| 2flhB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.63 | 55.0 | 4.42e-01 | 95.1% | 79.7% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.63 | 46.0 | 3.71e-01 | 76.5% | 56.1% |
| 1fw3A00 | 2.40.230.10 | Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Phospholipase A1 | 0.62 | 45.0 | 3.22e-01 | 76.5% | 50.4% |
| 1xuvA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.62 | 52.0 | 4.11e-01 | 91.4% | 71.8% |
| 2w4yA00 | 2.40.160.220 | Mainly Beta › Beta Barrel › Porin › | 0.62 | 42.0 | 3.70e-01 | 70.4% | 50.8% |
| 2c9jA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.61 | 50.0 | 3.74e-01 | 91.4% | 85.4% |
| 4w78G00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.61 | 51.0 | 4.09e-01 | 100.0% | 46.0% |
| 2pcsA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 49.0 | 4.03e-01 | 88.9% | 75.7% |
| 3bryA00 | 2.40.160.60 | Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) | 0.60 | 45.0 | 2.95e-01 | 81.5% | 71.2% |
| 3rd6A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 51.0 | 4.22e-01 | 93.8% | 80.6% |
| 3gkeA02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.60 | 53.0 | 3.90e-01 | 97.5% | 66.7% |
| 2bi0A02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.60 | 47.0 | 3.95e-01 | 100.0% | 47.6% |
| 1tw0A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 49.0 | 4.00e-01 | 91.4% | 78.3% |
| 4dkmA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.60 | 47.0 | 3.54e-01 | 87.7% | 86.4% |
| 1fm4A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 51.0 | 4.11e-01 | 96.3% | 77.4% |
| 3p9vA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 48.0 | 3.91e-01 | 90.1% | 72.8% |
| 1pn2B01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.59 | 50.0 | 4.09e-01 | 100.0% | 50.7% |
| 2c2iA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.59 | 46.0 | 3.81e-01 | 98.8% | 46.3% |
| 2v1oB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.59 | 49.0 | 4.07e-01 | 100.0% | 50.7% |
| 4meeA00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.59 | 47.0 | 3.21e-01 | 87.7% | 44.6% |
| 3otlA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 48.0 | 3.99e-01 | 92.6% | 79.7% |
| 2gvhB02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.58 | 47.0 | 4.22e-01 | 100.0% | 61.5% |
| 1yqzA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.58 | 41.0 | 3.76e-01 | 87.7% | 55.6% |
| 2vneA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 51.0 | 4.13e-01 | 100.0% | 77.9% |
| 4fx9A03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.58 | 42.0 | 3.72e-01 | 86.4% | 54.0% |
| 2ns9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 47.0 | 3.97e-01 | 92.6% | 78.4% |
| 2zylA02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.58 | 45.0 | 3.41e-01 | 87.7% | 56.2% |
| 3rt0C00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 48.0 | 3.74e-01 | 91.4% | 68.0% |
| 5egjA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.57 | 49.0 | 3.84e-01 | 100.0% | 45.5% |
| 2wraA00 | 2.60.120.400 | Mainly Beta › Sandwich › Jelly Rolls › Calcium-mediated lectin | 0.57 | 49.0 | 4.27e-01 | 95.1% | 98.4% |
| 1p4tA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.57 | 41.0 | 3.38e-01 | 77.8% | 88.4% |
| 2hngA00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.57 | 50.0 | 4.31e-01 | 98.8% | 63.2% |
| 3djwA00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 45.0 | 4.35e-01 | 88.9% | 77.9% |
| 1fx3B00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.56 | 47.0 | 3.90e-01 | 97.5% | 50.3% |
| 2yh6D00 | 3.30.530.50 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › | 0.56 | 43.0 | 4.02e-01 | 86.4% | 75.5% |
| 5e4bA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 48.0 | 3.79e-01 | 96.3% | 74.4% |
| 6rtqA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.56 | 40.0 | 3.43e-01 | 75.3% | 82.0% |
| 3cgbA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.56 | 40.0 | 3.67e-01 | 87.7% | 56.4% |
| 2cduA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.56 | 40.0 | 3.63e-01 | 87.7% | 54.9% |
| 4ienA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.56 | 46.0 | 3.76e-01 | 100.0% | 48.7% |
| 5ufvA00 | 2.70.50.70 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › | 0.55 | 49.0 | 3.55e-01 | 98.8% | 74.4% |
| 2uuvB01 | 3.40.462.40 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidase, cap domain/gating helix | 0.55 | 47.0 | 3.31e-01 | 95.1% | 81.6% |
| 4kz1A00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.55 | 38.0 | 3.24e-01 | 71.6% | 97.0% |
| 3vy8X00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.55 | 44.0 | 3.00e-01 | 90.1% | 90.0% |
| 6ka3A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 45.0 | 3.80e-01 | 96.3% | 81.6% |
| 6lofA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.54 | 47.0 | 3.79e-01 | 100.0% | 67.9% |
| 1lshA01 | 2.30.230.10 | Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A | 0.53 | 47.0 | 3.34e-01 | 100.0% | 92.8% |
| 5dl8A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.53 | 43.0 | 2.79e-01 | 90.1% | 90.0% |
| 3ndaA01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.53 | 45.0 | 3.28e-01 | 97.5% | 34.7% |
| 2h4pA01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.53 | 45.0 | 3.23e-01 | 96.3% | 35.5% |
| 6i7sG01 | 2.30.230.10 | Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A | 0.53 | 44.0 | 3.18e-01 | 96.3% | 76.2% |
| 5bkaE01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 37.0 | 3.22e-01 | 75.3% | 73.5% |
| 2w3xB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 46.0 | 3.86e-01 | 100.0% | 56.9% |
| 6pzjA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 42.0 | 3.41e-01 | 85.2% | 77.0% |
| 3jtyB01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.52 | 44.0 | 2.94e-01 | 97.5% | 98.9% |
| 4e3eA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 45.0 | 3.01e-01 | 100.0% | 40.5% |
| 1uynX00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.52 | 44.0 | 3.14e-01 | 100.0% | 89.2% |
| 2gtlO02 | 2.40.128.620 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 35.0 | 2.95e-01 | 72.8% | 53.4% |
| 1mtpA01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.51 | 45.0 | 3.29e-01 | 100.0% | 37.3% |
| 1wpuA00 | 3.40.1510.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hut operon positive regulatory protein HutP › Hut operon regulatory protein HutP | 0.51 | 44.0 | 3.66e-01 | 97.5% | 57.8% |
| 1wa9A02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 42.0 | 3.41e-01 | 95.1% | 68.5% |
| 2bi0A01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 44.0 | 3.64e-01 | 100.0% | 96.1% |
| 3a76A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 40.0 | 3.47e-01 | 91.4% | 68.3% |
| 3jcuO01 | 2.40.160.30 | Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor | 0.50 | 42.0 | 3.29e-01 | 91.4% | 76.1% |
| 3icsA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 42.0 | 2.95e-01 | 91.4% | 46.1% |
ECOD (84)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3782223 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.67 | 55.0 | 4.00e-01 | 88.9% | 58.2% |
| 5057736 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.67 | 57.0 | 4.85e-01 | 95.1% | 77.8% |
| 3593584 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.67 | 59.0 | 4.13e-01 | 100.0% | 56.9% |
| 3177725 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.67 | 58.0 | 4.01e-01 | 93.8% | 64.7% |
| 5037172 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.67 | 57.0 | 4.57e-01 | 95.1% | 66.9% |
| 3789272 | 222.1.1.20 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MFE-2_hydrat-2_N | 0.66 | 53.0 | 4.34e-01 | 100.0% | 47.3% |
| 5012014 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.66 | 49.0 | 3.86e-01 | 100.0% | 37.6% |
| 5034560 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.65 | 53.0 | 4.62e-01 | 98.8% | 59.2% |
| 6057 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.65 | 49.0 | 4.15e-01 | 100.0% | 48.1% |
| 4937367 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.64 | 53.0 | 4.61e-01 | 100.0% | 59.2% |
| 4527554 | 7503.1.1.8 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › DUF4136 | 0.63 | 54.0 | 4.31e-01 | 96.3% | 83.0% |
| 5005014 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.63 | 51.0 | 3.79e-01 | 92.6% | 59.1% |
| 3430917 | 881.1.1.2 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1 | 0.63 | 53.0 | 4.00e-01 | 93.8% | 61.5% |
| 4318546 | 504.1.1.1 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB | 0.62 | 56.0 | 4.66e-01 | 100.0% | 58.5% |
| 3740523 | 331.3.1.6 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI | 0.62 | 53.0 | 4.20e-01 | 93.8% | 79.4% |
| 2462280 | 331.3.1.6 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI | 0.62 | 52.0 | 4.06e-01 | 93.8% | 76.9% |
| 3761549 | 223.1.1.29 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 | 0.62 | 54.0 | 4.59e-01 | 97.5% | 92.6% |
| 3202794 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.61 | 53.0 | 3.86e-01 | 100.0% | 71.1% |
| 4575250 | 331.3.1.40 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF1997 | 0.61 | 52.0 | 4.04e-01 | 96.3% | 70.3% |
| 3451883 | 331.3.1.40 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF1997 | 0.61 | 52.0 | 3.97e-01 | 96.3% | 70.8% |
| 5010189 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.60 | 53.0 | 4.41e-01 | 96.3% | 82.0% |
| 5030898 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.60 | 53.0 | 4.59e-01 | 100.0% | 64.2% |
| 3559721 | 331.3.1.6 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI | 0.60 | 50.0 | 3.90e-01 | 92.6% | 80.5% |
| 4984404 | 331.3.1.7 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG | 0.60 | 48.0 | 4.01e-01 | 88.9% | 78.4% |
| 3959606 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.60 | 49.0 | 3.93e-01 | 91.4% | 55.0% |
| 4932446 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.60 | 51.0 | 4.50e-01 | 96.3% | 63.3% |
| 5053461 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.60 | 50.0 | 3.92e-01 | 92.6% | 65.1% |
| 3604380 | 504.1.1.1 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB | 0.60 | 52.0 | 4.28e-01 | 100.0% | 53.8% |
| 3728177 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.60 | 53.0 | 3.94e-01 | 100.0% | 72.4% |
| 4037556 | 504.1.1.1 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB | 0.60 | 52.0 | 4.32e-01 | 100.0% | 55.7% |
| 3536617 | 223.1.1.29 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 | 0.59 | 51.0 | 4.40e-01 | 96.3% | 92.3% |
| 3504606 | 5087.2.1.2 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 | 0.59 | 51.0 | 3.45e-01 | 93.8% | 85.2% |
| 3608271 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.59 | 40.0 | 2.69e-01 | 70.4% | 33.3% |
| 3759236 | 223.1.1.77 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Intu_longin_3 | 0.59 | 52.0 | 4.02e-01 | 95.1% | 75.9% |
| 3932700 | 271.1.1.5 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › G2F | 0.59 | 41.0 | 3.03e-01 | 74.1% | 39.1% |
| 3917130 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.59 | 48.0 | 3.57e-01 | 91.4% | 61.8% |
| 3697909 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.58 | 49.0 | 3.70e-01 | 91.4% | 75.9% |
| 4199388 | 504.1.1.1 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB | 0.58 | 51.0 | 4.19e-01 | 97.5% | 53.8% |
| 3188705 | 222.1.1.17 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N | 0.58 | 50.0 | 4.05e-01 | 100.0% | 49.7% |
| 4371290 | 9.3.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Eryth_link_C | 0.58 | 41.0 | 3.55e-01 | 76.5% | 47.6% |
| 4652688 | 504.1.1.1 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB | 0.58 | 52.0 | 4.31e-01 | 100.0% | 57.1% |
| 3639875 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 53.0 | 4.32e-01 | 97.5% | 80.7% |
| 6058 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.58 | 47.0 | 4.26e-01 | 100.0% | 64.6% |
| 2581837 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.58 | 47.0 | 3.88e-01 | 92.6% | 80.4% |
| 5069076 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.58 | 47.0 | 4.14e-01 | 97.5% | 60.8% |
| 4259027 | 9.3.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Eryth_link_C | 0.58 | 40.0 | 3.45e-01 | 74.1% | 47.2% |
| 3244502 | 271.1.1.5 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › G2F | 0.57 | 41.0 | 3.03e-01 | 75.3% | 40.5% |
| 3797730 | 271.1.1.0 ↗ | beta barrels › GFP-like › GFP-like › GFP-like | 0.57 | 40.0 | 3.01e-01 | 75.3% | 40.5% |
| 3406725 | 5087.2.1.2 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 | 0.57 | 49.0 | 3.44e-01 | 97.5% | 89.3% |
| 3970758 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.57 | 47.0 | 4.15e-01 | 100.0% | 60.8% |
| 5796 | 504.1.1.2 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › DUF1149 | 0.57 | 49.0 | 4.28e-01 | 97.5% | 62.9% |
| 5027896 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.57 | 46.0 | 4.00e-01 | 100.0% | 57.6% |
| 3913066 | 223.2.1.36 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_3 | 0.57 | 46.0 | 3.58e-01 | 90.1% | 75.4% |
| 3211318 | 5087.2.1.0 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N | 0.57 | 48.0 | 3.37e-01 | 93.8% | 75.5% |
| 4213133 | 5084.5.1.6 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprB | 0.56 | 45.0 | 2.96e-01 | 88.9% | 91.7% |
| 3604221 | 11.1.1.51 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 | 0.56 | 43.0 | 3.62e-01 | 91.4% | 47.6% |
| 4943061 | 244.2.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain | 0.55 | 40.0 | 3.48e-01 | 87.7% | 49.6% |
| 3727656 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.55 | 48.0 | 3.64e-01 | 100.0% | 80.8% |
| 3387730 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.55 | 47.0 | 4.07e-01 | 100.0% | 59.3% |
| 4675848 | 9.2.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Avidin | 0.55 | 40.0 | 3.39e-01 | 77.8% | 80.6% |
| 4044625 | 5087.2.1.2 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 | 0.55 | 45.0 | 3.18e-01 | 96.3% | 75.7% |
| 297731 | 271.1.1.1 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › GFP | 0.55 | 48.0 | 3.57e-01 | 100.0% | 50.2% |
| 4191031 | 5084.3.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter | 0.55 | 47.0 | 3.24e-01 | 100.0% | 87.4% |
| 4100963 | 222.1.1.17 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N | 0.54 | 47.0 | 3.89e-01 | 100.0% | 53.8% |
| 4009143 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.54 | 43.0 | 2.97e-01 | 91.4% | 41.9% |
| 3277737 | 222.1.1.24 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › AfsA | 0.54 | 44.0 | 3.59e-01 | 100.0% | 46.3% |
| 3495055 | 5087.2.1.2 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 | 0.54 | 47.0 | 3.30e-01 | 96.3% | 84.8% |
| 3268067 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.54 | 45.0 | 3.90e-01 | 97.5% | 65.2% |
| 3589403 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.53 | 46.0 | 4.03e-01 | 95.1% | 99.2% |
| 3620338 | 11.1.5.84 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › ERMP1_C | 0.53 | 42.0 | 3.15e-01 | 87.7% | 93.7% |
| 4039744 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.53 | 45.0 | 3.12e-01 | 100.0% | 87.1% |
| 3281942 | 222.1.1.24 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › AfsA | 0.53 | 42.0 | 3.41e-01 | 100.0% | 42.3% |
| 4537321 | 5084.1.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity | 0.52 | 41.0 | 3.30e-01 | 88.9% | 74.4% |
| 5037122 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.52 | 46.0 | 3.47e-01 | 97.5% | 96.9% |
| 3629163 | 5087.2.1.0 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N | 0.52 | 44.0 | 3.19e-01 | 97.5% | 81.5% |
| 3182995 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.52 | 41.0 | 3.66e-01 | 86.4% | 80.8% |
| 2542700 | 5092.1.1.5 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › AdHead_fibreRBD | 0.52 | 43.0 | 3.24e-01 | 96.3% | 53.8% |
| 3263625 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.52 | 43.0 | 3.52e-01 | 96.3% | 75.2% |
| 3724576 | 4252.1.1.12 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › DUF7064 | 0.51 | 42.0 | 3.66e-01 | 88.9% | 98.3% |
| 4069053 | 5084.5.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 | 0.51 | 43.0 | 2.97e-01 | 98.8% | 95.3% |
| 4527549 | 5084.5.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 | 0.51 | 43.0 | 2.92e-01 | 98.8% | 95.9% |
| 4315252 | 243.1.1.26 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 | 0.51 | 40.0 | 3.43e-01 | 91.4% | 65.5% |
| 4305692 | 5084.1.1.34 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › DUF2715 | 0.51 | 44.0 | 3.53e-01 | 100.0% | 97.6% |
| 3726880 | 4252.1.1.12 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › DUF7064 | 0.50 | 42.0 | 3.60e-01 | 90.1% | 97.6% |
D4
high
residues 377-492_521-627
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lmlA03 | 2.60.40.4290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.78 | 29.0 | 4.77e-01 | 100.0% | 90.6% |
| 8ezmH02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 21.0 | 2.95e-01 | 92.4% | 72.3% |
| 2frgP00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 20.0 | 2.82e-01 | 93.3% | 69.8% |
| 7emfR01 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.50 | 29.0 | 3.20e-01 | 87.4% | 68.0% |
D5
medium
residues 860-967
Domain cluster:
rep: IMGVR_UViG_3300010327_000704-3300010327-Ga0116246_1000102125__D309-398
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17482.8 best | Phage_sheath_1C | 36.6 | 5.60e-09 | 89.8% | 93.3% |
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1aj3A00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 38.0 | 4.00e-01 | 83.3% | 65.3% |
| 3hoiA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.63 | 47.0 | 3.89e-01 | 77.8% | 82.4% |
| 2ymvA02 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.62 | 46.0 | 3.61e-01 | 76.9% | 79.5% |
| 3vm9A02 | 6.10.140.2110 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 33.0 | 4.31e-01 | 76.9% | 96.5% |
| 5j62B00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.61 | 45.0 | 3.64e-01 | 77.8% | 82.3% |
| 3pxvB00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.60 | 44.0 | 3.73e-01 | 77.8% | 79.9% |
| 1bkjA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.59 | 43.0 | 3.48e-01 | 78.7% | 61.7% |
| 3h36A00 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.59 | 40.0 | 4.58e-01 | 70.4% | 96.2% |
| 2nraC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 43.0 | 4.45e-01 | 76.9% | 92.2% |
| 2cazD00 | 6.10.140.820 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 30.0 | 3.88e-01 | 74.1% | 88.3% |
| 4dn2A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.58 | 43.0 | 3.61e-01 | 78.7% | 75.4% |
| 1p0zA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 44.0 | 4.13e-01 | 81.5% | 97.7% |
| 1vkvA01 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.56 | 41.0 | 3.52e-01 | 77.8% | 74.4% |
| 3qf7A02 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.55 | 30.0 | 3.79e-01 | 78.7% | 90.5% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 27.0 | 3.38e-01 | 82.4% | 75.8% |
| 3tklB01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 29.0 | 3.64e-01 | 82.4% | 88.7% |
| 7ymiZ01 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.53 | 29.0 | 3.88e-01 | 78.7% | 100.0% |
| 1iuqA01 | 1.10.1200.50 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glycerol-3-phosphate acyltransferase, alpha helical bundle, N-terminal | 0.53 | 36.0 | 4.11e-01 | 73.1% | 100.0% |
| 1is8A01 | 1.10.286.10 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › GTP cyclohydrolase I, N-terminal domain | 0.52 | 29.0 | 3.60e-01 | 81.5% | 95.0% |
| 4oo2A02 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.51 | 36.0 | 2.92e-01 | 84.3% | 38.3% |
| 2dnxA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 33.0 | 3.12e-01 | 83.3% | 52.3% |
| 3napB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 37.0 | 2.96e-01 | 80.6% | 69.6% |
| 1thgA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 37.0 | 2.45e-01 | 79.6% | 71.1% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4957559 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.92 | 77.0 | 8.05e-01 | 87.0% | 99.0% |
| 3980756 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.90 | 78.0 | 7.95e-01 | 97.2% | 93.3% |
| 4888785 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.88 | 68.0 | 7.56e-01 | 80.6% | 100.0% |
| 3949098 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.87 | 78.0 | 7.84e-01 | 97.2% | 92.7% |
| 1518918 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.86 | 76.0 | 7.56e-01 | 93.5% | 90.2% |
| 4883050 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.85 | 66.0 | 7.30e-01 | 80.6% | 100.0% |
| 3947226 | 283.2.1.10 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29514 | 0.83 | 69.0 | 6.48e-01 | 88.0% | 96.9% |
| 1148184 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.78 | 59.0 | 5.95e-01 | 79.6% | 78.7% |
| 3945698 | 283.2.1.10 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29514 | 0.75 | 66.0 | 6.79e-01 | 96.3% | 99.0% |
| 4433785 | 283.2.1.4 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GP46 | 0.72 | 54.0 | 5.06e-01 | 77.8% | 93.1% |
| 4946087 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.72 | 54.0 | 5.13e-01 | 77.8% | 73.6% |
| 3229793 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.70 | 37.0 | 4.15e-01 | 77.8% | 64.7% |
| 3277893 | 5069.1.3.101 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › GtrA_DPMS_TM | 0.66 | 47.0 | 4.43e-01 | 74.1% | 94.6% |
| 3402099 | 5043.2.1.5 ↗ | extended segments › Sensor proteins transmembrane domains › NarQ transmembrane domain › NarQ transmembrane domain › ATP_synt_H | 0.62 | 35.0 | 4.06e-01 | 85.2% | 78.7% |
| 3692979 | 375.1.9.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase | 0.62 | 43.0 | 3.45e-01 | 92.6% | 37.6% |
| 3385570 | 5043.1.1.21 ↗ | extended segments › Sensor proteins transmembrane domains › Htr2 transmembrane domain-like › Htr2 transmembrane domain-like › DUF2393 | 0.61 | 36.0 | 4.19e-01 | 81.5% | 84.0% |
| 4312327 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 45.0 | 4.08e-01 | 79.6% | 88.5% |
| 3947564 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.59 | 34.0 | 4.23e-01 | 81.5% | 93.8% |
| 3184585 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.59 | 37.0 | 4.32e-01 | 87.0% | 95.7% |
| 3870376 | 194.1.1.3 ↗ | alpha complex topology › Serum albumin-like › Serum albumin-like › Serum albumin-like › ECM1 | 0.59 | 41.0 | 3.80e-01 | 71.3% | 63.0% |
| 4242465 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.58 | 36.0 | 3.87e-01 | 83.3% | 70.5% |
| 4661002 | 312.1.1.2 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › HIT | 0.56 | 38.0 | 3.61e-01 | 75.0% | 56.7% |
| 4945121 | 312.1.1.0 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related | 0.56 | 39.0 | 3.55e-01 | 70.4% | 69.0% |
| 4970254 | 2011.1.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 | 0.56 | 44.0 | 3.21e-01 | 82.4% | 47.2% |
| 3950977 | 5058.1.1.9 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Colicin_V | 0.56 | 40.0 | 3.53e-01 | 73.1% | 76.1% |
| 3292735 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.56 | 42.0 | 3.96e-01 | 81.5% | 94.1% |
| 5050737 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.56 | 42.0 | 3.28e-01 | 79.6% | 65.0% |
| 4098438 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.55 | 33.0 | 3.41e-01 | 76.9% | 62.0% |
| 3387627 | 304.113.1.1 ↗ | a+b two layers › Alpha-beta plaits › Alpha subunit of glutamate synthase, insertion domain › Alpha subunit of glutamate synthase, insertion domain › GATase_2 | 0.55 | 36.0 | 3.98e-01 | 81.5% | 88.7% |
| 3612629 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.55 | 32.0 | 3.25e-01 | 78.7% | 56.4% |
| 3686023 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.54 | 34.0 | 3.44e-01 | 76.9% | 61.8% |
| 4271696 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.53 | 40.0 | 3.85e-01 | 81.5% | 97.7% |
| 4237810 | 2003.1.5.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_5 | 0.51 | 38.0 | 2.97e-01 | 77.8% | 73.6% |
| 3720892 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.51 | 36.0 | 3.32e-01 | 93.5% | 56.4% |
| 3597348 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.51 | 33.0 | 2.41e-01 | 81.5% | 23.3% |
| 3447062 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.50 | 36.0 | 2.92e-01 | 73.1% | 82.0% |