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SR-VP_4-6_scaffold_141_4086954_prodigal-single.1__X__X__00075
Bact-VirSR-VP_4-6_scaffold_141_4086954_prodigal-single.1__X__X__00075
Identity
- Kingdom:
- phage
Quality
68.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-79
Domain cluster:
rep: MT151604.1__QIW88708.1__P59_111__00110__D1-62
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5kmpB00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.55 | 48.0 | 3.06e-01 | 100.0% | 68.9% |
| 2od0A00 | 3.30.1460.30 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › YgaC/TfoX-N like chaperone | 0.55 | 38.0 | 3.49e-01 | 75.3% | 77.7% |
| 3d2uE01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.53 | 42.0 | 3.11e-01 | 84.9% | 83.5% |
| 2dy1A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 42.0 | 2.96e-01 | 100.0% | 59.3% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3924711 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.58 | 49.0 | 3.33e-01 | 100.0% | 90.3% |
| 3842370 | 233.1.1.0 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain | 0.54 | 39.0 | 3.09e-01 | 79.5% | 68.6% |
| 3788490 | 633.1.1.1 ↗ | alpha bundles › Bromodomain-like › Bromodomain › Bromodomain › Bromodomain | 0.50 | 34.0 | 2.61e-01 | 71.2% | 42.0% |