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SR-VP_4-6_scaffold_141_4086954_prodigal-single.1__X__X__00148
Bact-VirSR-VP_4-6_scaffold_141_4086954_prodigal-single.1__X__X__00148
Identity
- Kingdom:
- phage
Quality
65.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-67
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3owaA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.65 | 46.0 | 3.39e-01 | 74.1% | 84.1% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.65 | 45.0 | 3.28e-01 | 72.2% | 68.6% |
| 4ht4A00 | 3.30.930.30 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › | 0.57 | 40.0 | 2.84e-01 | 77.8% | 42.8% |
| 2o2kA02 | 1.10.288.10 | Mainly Alpha › Orthogonal Bundle › Cobalamin-dependent Methionine Synthase; domain 2 › Cobalamin-dependent Methionine Synthase, domain 2 | 0.54 | 40.0 | 3.43e-01 | 79.6% | 98.9% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4196087 | 101.1.2.491 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_BREX_BrxC | 0.62 | 48.0 | 3.59e-01 | 83.3% | 52.3% |
| 3183532 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.61 | 44.0 | 3.43e-01 | 75.9% | 84.7% |
| 3808906 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.57 | 49.0 | 3.04e-01 | 100.0% | 60.3% |