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SR-VP_4-6_scaffold_141_4086954_prodigal-single.1__X__X__00185
Bact-VirSR-VP_4-6_scaffold_141_4086954_prodigal-single.1__X__X__00185
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 41-146
Domain cluster:
rep: SRR1747018_scaffold_13_prodigal-single.1__X__X__00316__D12-101
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3g7mA00 | 2.60.110.10 | Mainly Beta › Sandwich › Thaumatin › Thaumatin | 0.80 | 56.0 | 4.93e-01 | 72.6% | 98.7% |
| 5aq0B00 | 2.60.40.1120 | Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain | 0.74 | 54.0 | 6.00e-01 | 86.8% | 97.6% |
| 3ztdF01 | 2.60.40.780 | Mainly Beta › Sandwich › Immunoglobulin-like › von Hippel-Lindau disease tumour suppressor, beta domain | 0.73 | 51.0 | 5.53e-01 | 71.7% | 87.8% |
| 3mn8B02 | 2.60.40.1120 | Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain | 0.72 | 53.0 | 5.94e-01 | 84.9% | 98.8% |
| 1uwyA02 | 2.60.40.1120 | Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain | 0.72 | 54.0 | 5.63e-01 | 78.3% | 86.6% |
| 3e8vA00 | 2.60.40.1120 | Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain | 0.70 | 51.0 | 5.65e-01 | 77.4% | 97.6% |
| 2j43A01 | 2.60.40.1110 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.68 | 48.0 | 4.98e-01 | 74.5% | 96.0% |
| 6fwvA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 52.0 | 5.56e-01 | 93.4% | 96.7% |
| 4yokA01 | 2.60.40.1120 | Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain | 0.66 | 48.0 | 5.11e-01 | 76.4% | 93.6% |
| 4jcwA02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.65 | 43.0 | 4.65e-01 | 74.5% | 80.0% |
| 4fxtA01 | 2.60.40.1120 | Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain | 0.65 | 47.0 | 5.15e-01 | 76.4% | 96.5% |
| 3zs3A00 | 2.60.110.10 | Mainly Beta › Sandwich › Thaumatin › Thaumatin | 0.63 | 54.0 | 4.21e-01 | 91.5% | 98.6% |
| 1aunA00 | 2.60.110.10 | Mainly Beta › Sandwich › Thaumatin › Thaumatin | 0.63 | 54.0 | 4.24e-01 | 91.5% | 98.6% |
| 5u55A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 33.0 | 3.20e-01 | 89.6% | 44.3% |
| 4hscX04 | 2.60.40.1430 | Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 | 0.62 | 52.0 | 5.14e-01 | 89.6% | 91.8% |
| 7altB01 | 2.60.40.3510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 51.0 | 4.51e-01 | 90.6% | 91.1% |
| 4a1rC00 | 2.60.40.4150 | Mainly Beta › Sandwich › Immunoglobulin-like › Type VI secretion system, lipoprotein SciN | 0.61 | 51.0 | 4.67e-01 | 89.6% | 94.2% |
| 1s3rA04 | 2.60.40.1430 | Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 | 0.61 | 50.0 | 5.01e-01 | 89.6% | 91.0% |
| 3w57A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.60 | 49.0 | 4.88e-01 | 89.6% | 86.5% |
| 3gldA02 | 2.60.40.1140 | Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain | 0.59 | 52.0 | 4.80e-01 | 94.3% | 97.8% |
| 2xidA04 | 2.60.40.1140 | Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain | 0.59 | 52.0 | 5.07e-01 | 94.3% | 99.1% |
| 3zhnA00 | 2.60.40.4150 | Mainly Beta › Sandwich › Immunoglobulin-like › Type VI secretion system, lipoprotein SciN | 0.59 | 48.0 | 4.54e-01 | 89.6% | 91.6% |
| 6bbtA02 | 2.60.40.1140 | Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain | 0.58 | 50.0 | 4.87e-01 | 93.4% | 97.5% |
| 2cjsA01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.57 | 48.0 | 4.26e-01 | 90.6% | 77.8% |
| 1wfjA01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.57 | 47.0 | 4.55e-01 | 91.5% | 85.5% |
| 2ep6A01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.56 | 47.0 | 4.51e-01 | 90.6% | 91.0% |
| 3v9fA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 44.0 | 4.24e-01 | 86.8% | 85.1% |
| 4n2kA01 | 2.60.40.1860 | Mainly Beta › Sandwich › Immunoglobulin-like › Protein-arginine deiminase, N-terminal domain | 0.53 | 38.0 | 3.75e-01 | 100.0% | 68.9% |
| 2oa2A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 35.0 | 3.37e-01 | 89.6% | 59.5% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3628159 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.81 | 59.0 | 6.02e-01 | 75.5% | 81.9% |
| 2037615 | 11.8.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like › Thaumatin | 0.80 | 56.0 | 4.93e-01 | 72.6% | 98.7% |
| 3550240 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.77 | 59.0 | 5.84e-01 | 89.6% | 76.4% |
| 3213081 | 11.8.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like › Thaumatin | 0.77 | 54.0 | 4.67e-01 | 71.7% | 97.4% |
| 5008695 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.76 | 57.0 | 5.96e-01 | 77.4% | 89.5% |
| 3623738 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.76 | 52.0 | 6.05e-01 | 76.4% | 98.7% |
| 3932715 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.75 | 53.0 | 5.42e-01 | 73.6% | 88.6% |
| 3414304 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.75 | 54.0 | 5.44e-01 | 75.5% | 74.3% |
| 4933385 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.75 | 50.0 | 5.85e-01 | 71.7% | 97.3% |
| 3373186 | 11.8.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like › Thaumatin | 0.74 | 52.0 | 4.42e-01 | 72.6% | 91.2% |
| 3944956 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.73 | 57.0 | 5.43e-01 | 89.6% | 70.8% |
| 5032096 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.73 | 54.0 | 5.77e-01 | 77.4% | 93.3% |
| 5062241 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.72 | 53.0 | 5.86e-01 | 76.4% | 96.5% |
| 5059037 | 11.1.4.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg | 0.72 | 54.0 | 5.91e-01 | 77.4% | 97.6% |
| 5080049 | 11.1.4.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg | 0.72 | 54.0 | 5.92e-01 | 86.8% | 96.5% |
| 3586984 | 11.1.4.36 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › SpaA | 0.72 | 51.0 | 5.47e-01 | 72.6% | 94.4% |
| 5083822 | 11.1.4.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg | 0.71 | 55.0 | 5.96e-01 | 81.1% | 95.6% |
| 5080620 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.71 | 51.0 | 5.75e-01 | 73.6% | 97.5% |
| 5041001 | 11.1.4.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg | 0.71 | 50.0 | 5.70e-01 | 76.4% | 97.5% |
| 5041000 | 11.1.4.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg | 0.71 | 56.0 | 6.03e-01 | 99.1% | 97.8% |
| 3999787 | 11.1.4.98 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Ig_NOMO | 0.70 | 48.0 | 5.37e-01 | 79.2% | 92.5% |
| 3300660 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.70 | 52.0 | 5.67e-01 | 77.4% | 98.8% |
| 3545434 | 11.1.1.1066 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_NOMO | 0.69 | 47.0 | 5.43e-01 | 86.8% | 98.7% |
| 4980189 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.69 | 50.0 | 5.52e-01 | 75.5% | 96.5% |
| 3712543 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.69 | 52.0 | 5.22e-01 | 77.4% | 87.6% |
| 3520066 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 51.0 | 5.15e-01 | 77.4% | 83.8% |
| 3539598 | 11.1.4.98 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Ig_NOMO | 0.68 | 46.0 | 5.32e-01 | 86.8% | 98.7% |
| 3652207 | 11.1.4.76 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › NOMO_5th | 0.68 | 48.0 | 5.14e-01 | 72.6% | 93.3% |
| 3503369 | 11.1.4.76 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › NOMO_5th | 0.68 | 47.0 | 5.07e-01 | 71.7% | 98.9% |
| 4982446 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.67 | 55.0 | 5.77e-01 | 98.1% | 96.8% |
| 1514716 | 11.1.4.19 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF3823 | 0.66 | 49.0 | 5.21e-01 | 78.3% | 93.7% |
| 2411355 | 11.1.4.36 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › SpaA | 0.66 | 51.0 | 5.45e-01 | 85.8% | 96.7% |
| 3937887 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.66 | 46.0 | 5.19e-01 | 75.5% | 97.5% |
| 4965700 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.65 | 45.0 | 4.86e-01 | 75.5% | 84.3% |
| 3823351 | 11.1.4.55 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Self-incomp_S1 | 0.65 | 54.0 | 5.46e-01 | 89.6% | 91.7% |
| 5055231 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.65 | 48.0 | 5.12e-01 | 77.4% | 96.7% |
| 5059004 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.65 | 51.0 | 5.04e-01 | 84.9% | 97.4% |
| 5046239 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.64 | 53.0 | 5.48e-01 | 93.4% | 95.0% |
| 3390876 | 11.1.4.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › VHL | 0.64 | 53.0 | 5.50e-01 | 88.7% | 94.0% |
| 2439597 | 11.1.4.39 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF5979 | 0.63 | 56.0 | 5.32e-01 | 94.3% | 95.1% |
| 3583265 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.63 | 53.0 | 5.55e-01 | 88.7% | 100.0% |
| 3678767 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.62 | 52.0 | 5.13e-01 | 91.5% | 99.1% |
| 3515097 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.62 | 53.0 | 5.41e-01 | 92.5% | 100.0% |
| 5059003 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 55.0 | 5.27e-01 | 96.2% | 98.3% |
| 1883531 | 11.15.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Perfringolysin O beta sandwich domain › Perfringolysin O beta sandwich domain › Thiol_cytolys_C | 0.61 | 51.0 | 5.08e-01 | 89.6% | 91.8% |
| 4011188 | 11.1.4.92 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › VPS13_VAB | 0.61 | 51.0 | 5.28e-01 | 89.6% | 98.0% |
| 3945605 | 11.1.4.25 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › PapC_C | 0.61 | 43.0 | 4.61e-01 | 74.5% | 93.3% |
| 1108811 | 11.15.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Perfringolysin O beta sandwich domain › Perfringolysin O beta sandwich domain › Thiol_cytolys_C | 0.60 | 51.0 | 5.06e-01 | 90.6% | 92.7% |
| 3642601 | 11.1.4.92 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › VPS13_VAB | 0.60 | 52.0 | 5.01e-01 | 92.5% | 98.3% |
| 3802592 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.58 | 49.0 | 4.69e-01 | 91.5% | 85.0% |
| 3563258 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.56 | 47.0 | 4.35e-01 | 90.6% | 85.2% |
| 3480267 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.56 | 47.0 | 3.55e-01 | 91.5% | 54.0% |
| 4433561 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.54 | 35.0 | 3.22e-01 | 89.6% | 50.7% |
| 3411209 | 3698.1.1.2 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT_C | 0.54 | 41.0 | 3.54e-01 | 82.1% | 88.6% |