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SR-VP_4-6_scaffold_141_4086954_prodigal-single.1__X__X__00313
Bact-VirSR-VP_4-6_scaffold_141_4086954_prodigal-single.1__X__X__00313
Identity
- Kingdom:
- phage
Quality
84.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-70
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_238879_prodigal-single.1__X__X__00278__D98-161
CATH (92)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 69.0 | 6.45e-01 | 100.0% | 76.8% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.80 | 68.0 | 6.61e-01 | 93.0% | 96.8% |
| 3oymA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 70.0 | 6.57e-01 | 98.2% | 94.3% |
| 3j7yD02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 69.0 | 6.14e-01 | 100.0% | 76.5% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 67.0 | 6.21e-01 | 94.7% | 77.5% |
| 4krtB03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.77 | 61.0 | 5.78e-01 | 86.0% | 100.0% |
| 2dl5A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.77 | 65.0 | 5.84e-01 | 93.0% | 79.5% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 66.0 | 6.10e-01 | 94.7% | 76.4% |
| 1vwxA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 67.0 | 6.04e-01 | 100.0% | 80.0% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 65.0 | 6.28e-01 | 100.0% | 83.3% |
| 3ic8A01 | 3.40.30.110 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › | 0.75 | 65.0 | 4.60e-01 | 98.2% | 34.5% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.75 | 61.0 | 5.80e-01 | 89.5% | 83.8% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.75 | 56.0 | 5.99e-01 | 91.2% | 95.8% |
| 2akkA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.75 | 65.0 | 6.05e-01 | 100.0% | 93.2% |
| 2ct4A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.75 | 61.0 | 5.71e-01 | 89.5% | 84.3% |
| 2heqA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 59.0 | 6.02e-01 | 86.0% | 100.0% |
| 4n4iA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 59.0 | 5.10e-01 | 91.2% | 55.6% |
| 2v1rA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 60.0 | 5.75e-01 | 89.5% | 95.5% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 65.0 | 6.20e-01 | 100.0% | 83.8% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 61.0 | 6.01e-01 | 91.2% | 100.0% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 64.0 | 6.28e-01 | 98.2% | 95.2% |
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 62.0 | 5.73e-01 | 100.0% | 87.0% |
| 7z0kB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.73 | 59.0 | 5.71e-01 | 89.5% | 96.9% |
| 4dapA01 | 2.40.50.580 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.72 | 51.0 | 4.53e-01 | 73.7% | 87.5% |
| 2dk3A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 64.0 | 5.60e-01 | 100.0% | 80.2% |
| 1s1nA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 60.0 | 5.91e-01 | 91.2% | 98.3% |
| 2vb6A01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.72 | 58.0 | 5.94e-01 | 89.5% | 92.6% |
| 3udcA02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 56.0 | 5.90e-01 | 96.5% | 98.0% |
| 3pfsB00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 64.0 | 4.88e-01 | 100.0% | 66.9% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 64.0 | 6.33e-01 | 100.0% | 96.6% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 59.0 | 5.74e-01 | 91.2% | 93.5% |
| 2ldmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 56.0 | 5.79e-01 | 93.0% | 94.3% |
| 7u32F02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.71 | 55.0 | 5.78e-01 | 86.0% | 100.0% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 60.0 | 6.08e-01 | 96.5% | 96.4% |
| 2pqhB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.71 | 58.0 | 5.54e-01 | 89.5% | 87.7% |
| 3teeA02 | 2.30.30.760 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 61.0 | 5.58e-01 | 94.7% | 78.1% |
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.71 | 61.0 | 6.04e-01 | 100.0% | 100.0% |
| 2a5hA03 | 6.20.120.40 | Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.71 | 35.0 | 3.44e-01 | 78.9% | 41.9% |
| 2vknA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.71 | 58.0 | 5.59e-01 | 91.2% | 90.9% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 57.0 | 5.69e-01 | 89.5% | 98.3% |
| 1ssfA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 58.0 | 5.91e-01 | 94.7% | 98.2% |
| 3npfB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 58.0 | 5.58e-01 | 93.0% | 97.0% |
| 5ajiB02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 55.0 | 5.72e-01 | 96.5% | 100.0% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 55.0 | 5.19e-01 | 87.7% | 91.2% |
| 2rqrA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 56.0 | 4.42e-01 | 91.2% | 50.4% |
| 4a53A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 57.0 | 5.60e-01 | 96.5% | 90.3% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 56.0 | 5.64e-01 | 94.7% | 91.5% |
| 2jxbA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 56.0 | 4.88e-01 | 91.2% | 65.1% |
| 3npfA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 54.0 | 5.09e-01 | 89.5% | 90.0% |
| 3pnnA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.67 | 57.0 | 3.66e-01 | 100.0% | 40.2% |
| 1y0mA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 53.0 | 5.19e-01 | 89.5% | 95.1% |
| 2gs5A01 | 3.40.1740.10 | Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like | 0.66 | 56.0 | 3.94e-01 | 98.2% | 78.2% |
| 7razA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 56.0 | 4.97e-01 | 98.2% | 67.1% |
| 2k57A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 51.0 | 5.17e-01 | 89.5% | 90.9% |
| 1fx7B03 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.64 | 54.0 | 4.95e-01 | 100.0% | 95.0% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.64 | 50.0 | 4.87e-01 | 89.5% | 77.3% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 50.0 | 4.90e-01 | 91.2% | 90.6% |
| 1yr1A00 | 3.40.50.10960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 48.0 | 3.86e-01 | 84.2% | 77.3% |
| 2ew0A00 | 3.40.1740.10 | Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like | 0.63 | 52.0 | 3.77e-01 | 96.5% | 82.3% |
| 1y13A00 | 3.30.479.10 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD | 0.62 | 43.0 | 3.11e-01 | 71.9% | 59.5% |
| 1awjA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 47.0 | 4.41e-01 | 89.5% | 74.0% |
| 4iv9A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 46.0 | 3.01e-01 | 84.2% | 47.5% |
| 4bjzA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 44.0 | 3.29e-01 | 84.2% | 42.9% |
| 1xovA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 46.0 | 4.47e-01 | 87.7% | 93.9% |
| 4k7zA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 45.0 | 3.06e-01 | 84.2% | 61.2% |
| 2k0mA00 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 47.0 | 3.97e-01 | 93.0% | 70.2% |
| 2in5A00 | 2.40.360.10 | Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like | 0.59 | 47.0 | 3.30e-01 | 91.2% | 84.1% |
| 4nsxA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 48.0 | 3.04e-01 | 93.0% | 21.9% |
| 2v3aA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 47.0 | 3.62e-01 | 91.2% | 88.1% |
| 4a2lF02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 45.0 | 2.94e-01 | 93.0% | 22.3% |
| 4m52A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 44.0 | 3.03e-01 | 84.2% | 60.8% |
| 4b1bA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 48.0 | 2.90e-01 | 96.5% | 53.8% |
| 1h6vA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 44.0 | 2.98e-01 | 84.2% | 62.1% |
| 2cduA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 46.0 | 3.51e-01 | 93.0% | 80.8% |
| 4i79A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 46.0 | 2.95e-01 | 93.0% | 22.8% |
| 3h8lA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 44.0 | 3.10e-01 | 86.0% | 50.7% |
| 2hqvA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.57 | 46.0 | 3.46e-01 | 100.0% | 59.9% |
| 5x68A00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 47.0 | 2.94e-01 | 94.7% | 42.5% |
| 4ci8A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 44.0 | 2.85e-01 | 93.0% | 21.7% |
| 2xdoD00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 41.0 | 2.58e-01 | 84.2% | 42.0% |
| 3i6dA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 40.0 | 3.11e-01 | 84.2% | 49.7% |
| 2kjzA01 | 3.30.720.120 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.55 | 36.0 | 3.67e-01 | 87.7% | 70.4% |
| 3h27A00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.54 | 45.0 | 2.78e-01 | 100.0% | 31.5% |
| 5nahA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 44.0 | 2.77e-01 | 98.2% | 42.8% |
| 2ymsA00 | 2.40.128.630 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 42.0 | 3.41e-01 | 93.0% | 50.8% |
| 2a6hC05 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.53 | 37.0 | 3.44e-01 | 73.7% | 73.3% |
| 2ymsB00 | 2.40.10.480 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.53 | 42.0 | 3.95e-01 | 93.0% | 85.1% |
| 6g6qA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 42.0 | 3.24e-01 | 93.0% | 43.1% |
| 4c5wA01 | 3.30.2020.30 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › | 0.52 | 42.0 | 3.64e-01 | 94.7% | 93.8% |
| 4flnA02 | 3.20.190.20 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › | 0.52 | 42.0 | 3.17e-01 | 93.0% | 91.4% |
| 6m90A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 40.0 | 2.63e-01 | 91.2% | 21.0% |
| 3udfA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 43.0 | 3.69e-01 | 96.5% | 100.0% |
ECOD (100)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4998329 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.87 | 71.0 | 7.24e-01 | 100.0% | 90.9% |
| 4949848 | 4.1.1.364 ↗ | beta barrels › SH3 › SH3 › SH3 › GatD_N | 0.85 | 71.0 | 7.23e-01 | 98.2% | 92.7% |
| 4998870 | 4.1.1.483 ↗ | beta barrels › SH3 › SH3 › SH3 › RRXRR | 0.84 | 68.0 | 5.90e-01 | 100.0% | 58.8% |
| 3484007 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 71.0 | 6.58e-01 | 94.7% | 88.6% |
| 3243188 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.81 | 74.0 | 6.71e-01 | 100.0% | 98.7% |
| 3598284 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 67.0 | 6.80e-01 | 100.0% | 92.7% |
| 3419491 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 72.0 | 7.13e-01 | 98.2% | 98.3% |
| 3850775 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.80 | 69.0 | 6.65e-01 | 98.2% | 83.1% |
| 3996679 | 4.1.1.251 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5 | 0.80 | 67.0 | 6.79e-01 | 98.2% | 94.5% |
| 3627869 | 4.1.1.347 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 | 0.80 | 72.0 | 5.19e-01 | 100.0% | 69.7% |
| 4191690 | 4.1.1.98 ↗ | beta barrels › SH3 › SH3 › SH3 › ProQ_C | 0.80 | 65.0 | 6.52e-01 | 96.5% | 87.9% |
| 3518287 | 4.1.1.347 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 | 0.80 | 70.0 | 5.48e-01 | 96.5% | 97.4% |
| 3898952 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.79 | 71.0 | 6.44e-01 | 98.2% | 85.3% |
| 4321173 | 4.1.1.98 ↗ | beta barrels › SH3 › SH3 › SH3 › ProQ_C | 0.79 | 67.0 | 6.67e-01 | 100.0% | 91.4% |
| 3404936 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.79 | 60.0 | 6.32e-01 | 87.7% | 92.0% |
| 3485745 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.79 | 64.0 | 6.32e-01 | 87.7% | 96.7% |
| 3299797 | 4.1.1.306 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N | 0.78 | 62.0 | 6.13e-01 | 93.0% | 81.7% |
| 3938589 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.78 | 59.0 | 6.26e-01 | 91.2% | 92.0% |
| 3475462 | 4.1.1.304 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O | 0.78 | 70.0 | 6.05e-01 | 98.2% | 68.2% |
| 3937333 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 65.0 | 5.72e-01 | 89.5% | 66.3% |
| 145285 | 4.1.1.66 ↗ | beta barrels › SH3 › SH3 › SH3 › LBR_tudor | 0.78 | 68.0 | 6.54e-01 | 100.0% | 84.8% |
| 3510676 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 70.0 | 5.87e-01 | 100.0% | 60.0% |
| 3428486 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.77 | 64.0 | 5.72e-01 | 100.0% | 65.0% |
| 3930643 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 69.0 | 6.83e-01 | 100.0% | 98.3% |
| 1442407 | 4.1.1.38 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C | 0.77 | 67.0 | 4.71e-01 | 100.0% | 34.6% |
| 3414063 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.77 | 66.0 | 6.77e-01 | 94.7% | 100.0% |
| 3706786 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 69.0 | 6.25e-01 | 100.0% | 81.3% |
| 3558188 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.76 | 69.0 | 6.24e-01 | 100.0% | 82.7% |
| 5053906 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.76 | 65.0 | 6.44e-01 | 96.5% | 96.7% |
| 3817476 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.76 | 61.0 | 6.45e-01 | 94.7% | 100.0% |
| 3264883 | 4.1.1.304 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O | 0.76 | 65.0 | 6.67e-01 | 94.7% | 98.2% |
| 4003015 | 4.1.1.318 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26085 | 0.76 | 63.0 | 6.26e-01 | 89.5% | 98.3% |
| 3235419 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 61.0 | 5.98e-01 | 86.0% | 90.0% |
| 3915732 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.76 | 64.0 | 5.56e-01 | 93.0% | 72.9% |
| 3649741 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.76 | 64.0 | 5.82e-01 | 98.2% | 70.7% |
| 3486496 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 64.0 | 6.52e-01 | 96.5% | 98.2% |
| 3420348 | 4.1.1.306 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N | 0.75 | 64.0 | 6.54e-01 | 98.2% | 98.2% |
| 4157193 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.75 | 67.0 | 6.29e-01 | 100.0% | 88.6% |
| 3998022 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.75 | 57.0 | 5.87e-01 | 93.0% | 85.5% |
| 3476178 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 64.0 | 5.06e-01 | 98.2% | 45.8% |
| 3480350 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.75 | 61.0 | 5.82e-01 | 87.7% | 86.2% |
| 4071824 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.75 | 65.0 | 5.99e-01 | 100.0% | 93.3% |
| 3270324 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.75 | 60.0 | 6.31e-01 | 89.5% | 100.0% |
| 4520767 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.75 | 59.0 | 5.54e-01 | 86.0% | 88.6% |
| 3546607 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.75 | 56.0 | 5.87e-01 | 87.7% | 92.0% |
| 3546309 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.75 | 64.0 | 5.82e-01 | 94.7% | 84.0% |
| 5000741 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.74 | 65.0 | 6.31e-01 | 100.0% | 93.8% |
| 3662319 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.74 | 65.0 | 5.87e-01 | 100.0% | 87.5% |
| 3775592 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.74 | 56.0 | 2.98e-01 | 93.0% | 3.0% |
| 3244497 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.74 | 66.0 | 4.79e-01 | 98.2% | 70.0% |
| 3880325 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.74 | 59.0 | 5.47e-01 | 86.0% | 81.4% |
| 3917372 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.73 | 66.0 | 6.00e-01 | 100.0% | 76.0% |
| 3222210 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.73 | 65.0 | 6.11e-01 | 100.0% | 94.3% |
| 5025104 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 56.0 | 5.94e-01 | 89.5% | 96.0% |
| 3236054 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.73 | 60.0 | 5.48e-01 | 89.5% | 76.0% |
| 1746358 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 65.0 | 5.21e-01 | 98.2% | 93.5% |
| 3372243 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 65.0 | 5.84e-01 | 100.0% | 80.0% |
| 4226849 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.73 | 65.0 | 5.81e-01 | 100.0% | 76.2% |
| 2890675 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.73 | 60.0 | 5.80e-01 | 89.5% | 89.1% |
| 3936885 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 62.0 | 6.01e-01 | 94.7% | 90.8% |
| 4418620 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.73 | 55.0 | 3.00e-01 | 89.5% | 4.6% |
| 5050320 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.73 | 64.0 | 5.90e-01 | 100.0% | 86.7% |
| 3399912 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.73 | 60.0 | 5.60e-01 | 89.5% | 81.4% |
| 4001172 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.73 | 60.0 | 5.64e-01 | 91.2% | 87.1% |
| 3495480 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.73 | 60.0 | 5.92e-01 | 89.5% | 95.0% |
| 3764432 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 61.0 | 5.92e-01 | 100.0% | 83.1% |
| 3541996 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.73 | 61.0 | 4.17e-01 | 91.2% | 30.5% |
| 2784372 | 4.1.1.8 ↗ | beta barrels › SH3 › SH3 › SH3 › IN_DBD_C | 0.72 | 59.0 | 5.74e-01 | 93.0% | 82.5% |
| 3824346 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 64.0 | 5.72e-01 | 100.0% | 78.8% |
| 3554026 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.72 | 64.0 | 6.32e-01 | 100.0% | 100.0% |
| 3574613 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.72 | 57.0 | 4.73e-01 | 94.7% | 49.0% |
| 3514867 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.72 | 60.0 | 5.48e-01 | 91.2% | 77.3% |
| 3482683 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 59.0 | 5.85e-01 | 89.5% | 96.7% |
| 3396896 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 61.0 | 5.57e-01 | 93.0% | 98.7% |
| 1145920 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.72 | 55.0 | 4.92e-01 | 93.0% | 57.8% |
| 3224441 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 59.0 | 5.58e-01 | 89.5% | 83.8% |
| 3514556 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 64.0 | 6.03e-01 | 100.0% | 85.7% |
| 3529708 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.72 | 60.0 | 5.45e-01 | 91.2% | 80.0% |
| 3240651 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.72 | 59.0 | 5.31e-01 | 91.2% | 72.5% |
| 3523918 | 4.1.1.99 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_10 | 0.72 | 64.0 | 6.12e-01 | 98.2% | 95.4% |
| 3903213 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.72 | 54.0 | 3.84e-01 | 89.5% | 26.9% |
| 4081631 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.72 | 60.0 | 5.43e-01 | 91.2% | 80.0% |
| 3616007 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.72 | 61.0 | 6.21e-01 | 94.7% | 100.0% |
| 3619619 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 63.0 | 5.93e-01 | 98.2% | 85.7% |
| 4128902 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 55.0 | 5.75e-01 | 89.5% | 96.0% |
| 5056826 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.71 | 61.0 | 5.90e-01 | 98.2% | 90.8% |
| 3553983 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.71 | 63.0 | 6.21e-01 | 100.0% | 100.0% |
| 2727964 | 4.1.1.105 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5604 | 0.71 | 61.0 | 6.05e-01 | 98.2% | 94.9% |
| 3931369 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.70 | 52.0 | 5.51e-01 | 78.9% | 100.0% |
| 4161673 | 4.1.1.105 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5604 | 0.70 | 61.0 | 5.38e-01 | 100.0% | 67.1% |
| 3587555 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 56.0 | 5.27e-01 | 89.5% | 90.0% |
| 2700914 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.70 | 55.0 | 4.98e-01 | 89.5% | 62.5% |
| 4302391 | 4.1.1.398 ↗ | beta barrels › SH3 › SH3 › SH3 › YolD | 0.70 | 58.0 | 5.59e-01 | 96.5% | 95.4% |
| 4554867 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.69 | 61.0 | 5.85e-01 | 100.0% | 95.4% |
| 3782325 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.69 | 57.0 | 5.56e-01 | 91.2% | 95.2% |
| 4068333 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.69 | 59.0 | 5.70e-01 | 98.2% | 93.8% |
| 4158712 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.68 | 60.0 | 5.61e-01 | 100.0% | 94.3% |
| 1263586 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 54.0 | 5.08e-01 | 89.5% | 88.9% |
| 3660244 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.65 | 54.0 | 4.96e-01 | 93.0% | 73.3% |
| 3660755 | 4.8.1.21 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PTM_DIR17_Tudor | 0.63 | 54.0 | 5.02e-01 | 100.0% | 76.0% |
D2
high
residues 73-133
Domain cluster:
representative
CATH (52)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wmmA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.87 | 63.0 | 6.96e-01 | 100.0% | 95.9% |
| 3whjA00 | 6.10.140.1710 | Special › Helix non-globular › Helix Hairpins › | 0.86 | 74.0 | 5.93e-01 | 100.0% | 50.5% |
| 3qo8A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.82 | 70.0 | 5.71e-01 | 100.0% | 52.8% |
| 6r1nA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.80 | 70.0 | 5.74e-01 | 100.0% | 55.3% |
| 3fxdB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 63.0 | 6.45e-01 | 100.0% | 93.1% |
| 1cxzB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.77 | 70.0 | 6.09e-01 | 100.0% | 68.6% |
| 4ceiA03 | 6.10.250.2380 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.76 | 66.0 | 5.46e-01 | 100.0% | 89.3% |
| 3rpmA02 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.75 | 49.0 | 4.39e-01 | 100.0% | 48.2% |
| 1j1jA02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.75 | 56.0 | 5.03e-01 | 100.0% | 57.6% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.74 | 68.0 | 4.74e-01 | 100.0% | 80.9% |
| 4p9tA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.74 | 59.0 | 4.76e-01 | 100.0% | 45.0% |
| 3m6jA01 | 1.20.1260.40 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.74 | 64.0 | 5.12e-01 | 95.1% | 76.1% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 65.0 | 4.52e-01 | 100.0% | 32.3% |
| 3rklA00 | 6.10.140.1640 | Special › Helix non-globular › Helix Hairpins › | 0.72 | 60.0 | 5.41e-01 | 93.4% | 67.5% |
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.72 | 67.0 | 6.34e-01 | 100.0% | 88.7% |
| 3terA00 | 1.10.287.3550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.72 | 67.0 | 5.23e-01 | 100.0% | 56.3% |
| 1u5pA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 65.0 | 5.24e-01 | 96.7% | 71.3% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.72 | 64.0 | 5.04e-01 | 100.0% | 50.0% |
| 4gw9A01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.71 | 58.0 | 4.02e-01 | 91.8% | 80.0% |
| 1gaxA05 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.71 | 65.0 | 6.11e-01 | 100.0% | 86.3% |
| 4u7iA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.71 | 54.0 | 4.76e-01 | 100.0% | 54.8% |
| 4it4A02 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.71 | 64.0 | 5.50e-01 | 96.7% | 64.8% |
| 2ch7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.71 | 64.0 | 4.01e-01 | 100.0% | 20.4% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.70 | 62.0 | 4.98e-01 | 100.0% | 85.8% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.70 | 61.0 | 5.48e-01 | 100.0% | 70.6% |
| 4p3fA00 | 1.10.3450.40 | Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › Signal recognition particle, SRP68 subunit, RNA-binding domain | 0.70 | 59.0 | 4.07e-01 | 100.0% | 29.0% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.69 | 58.0 | 5.92e-01 | 93.4% | 100.0% |
| 4nswB01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.68 | 59.0 | 3.90e-01 | 100.0% | 23.4% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.67 | 60.0 | 4.92e-01 | 100.0% | 56.4% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.67 | 58.0 | 5.67e-01 | 96.7% | 97.0% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 58.0 | 5.15e-01 | 100.0% | 89.8% |
| 7aalA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.64 | 56.0 | 3.67e-01 | 100.0% | 40.2% |
| 3lnnB03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.64 | 51.0 | 5.05e-01 | 100.0% | 85.1% |
| 3t6gB00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.64 | 56.0 | 4.31e-01 | 100.0% | 44.8% |
| 1m62A00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.63 | 54.0 | 4.82e-01 | 98.4% | 66.7% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 55.0 | 4.83e-01 | 100.0% | 72.8% |
| 2drvA00 | 3.30.1960.10 | Alpha Beta › 2-Layer Sandwich › SSo0622-like fold › tRNA wybutosine-synthesizing-like | 0.62 | 50.0 | 3.52e-01 | 88.5% | 67.5% |
| 6tmfT00 | 1.10.60.20 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 | 0.61 | 45.0 | 4.46e-01 | 77.0% | 76.6% |
| 1qv9A02 | 6.10.140.120 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 49.0 | 4.22e-01 | 100.0% | 55.3% |
| 1w36F02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.60 | 47.0 | 4.01e-01 | 85.2% | 96.0% |
| 4l8iB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.60 | 53.0 | 4.37e-01 | 100.0% | 67.0% |
| 6g94A00 | 1.20.950.20 | Mainly Alpha › Up-down Bundle › Fumarate Reductase Cytochrome B subunit › Transmembrane di-heme cytochromes, Chain C | 0.60 | 49.0 | 3.69e-01 | 100.0% | 34.9% |
| 2kseA00 | 1.20.5.1040 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Sensor protein qsec. | 0.59 | 53.0 | 4.90e-01 | 100.0% | 84.4% |
| 1hciA03 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 50.0 | 4.11e-01 | 100.0% | 50.8% |
| 1d0xA04 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.55 | 47.0 | 3.71e-01 | 100.0% | 92.0% |
| 5cqgA03 | 1.10.10.2210 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.54 | 42.0 | 3.92e-01 | 98.4% | 65.8% |
| 3hsiA02 | 3.30.870.10 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A | 0.53 | 37.0 | 2.58e-01 | 86.9% | 21.7% |
| 1ocsA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.52 | 42.0 | 3.36e-01 | 91.8% | 84.8% |
| 6t4hA03 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.52 | 47.0 | 3.34e-01 | 100.0% | 39.5% |
| 4arvA02 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.51 | 43.0 | 3.53e-01 | 100.0% | 95.2% |
| 2e1mA05 | 1.10.405.10 | Mainly Alpha › Orthogonal Bundle › Guanine Nucleotide Dissociation Inhibitor; domain 1 › Guanine Nucleotide Dissociation Inhibitor, domain 1 | 0.51 | 38.0 | 3.44e-01 | 83.6% | 100.0% |
| 3py8A04 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.50 | 41.0 | 3.29e-01 | 98.4% | 56.2% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1148128 | 622.5.1.1 ↗ | alpha bundles › YvfG-like › Probable 26S proteasome regulatory subunit p27 › Probable 26S proteasome regulatory subunit p27 › Nas2_N | 0.86 | 74.0 | 5.93e-01 | 100.0% | 50.5% |
| 3607086 | 4992.1.1.0 ↗ | extended segments › RelB-like › RelB-like › RelB-like | 0.85 | 69.0 | 6.22e-01 | 100.0% | 65.0% |
| 4316383 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.83 | 72.0 | 6.07e-01 | 100.0% | 58.9% |
| 3954913 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.83 | 74.0 | 5.98e-01 | 100.0% | 57.4% |
| 3473984 | 603.1.1.97 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE | 0.82 | 75.0 | 4.84e-01 | 100.0% | 31.8% |
| 3290286 | 150.8.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE | 0.81 | 72.0 | 5.09e-01 | 100.0% | 33.5% |
| 3953795 | 150.8.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE | 0.81 | 72.0 | 5.21e-01 | 100.0% | 39.4% |
| 3711643 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.81 | 70.0 | 4.40e-01 | 100.0% | 21.1% |
| 3615409 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.77 | 69.0 | 5.70e-01 | 100.0% | 57.1% |
| 4503822 | 3922.1.1.67 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Val_tRNA-synt_C | 0.75 | 70.0 | 6.72e-01 | 100.0% | 92.6% |
| 3608012 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.75 | 70.0 | 6.15e-01 | 100.0% | 77.6% |
| 3786623 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.75 | 60.0 | 4.81e-01 | 100.0% | 45.0% |
| 3976215 | 105.2.1.0 ↗ | alpha duplicates or obligate multimers › HLH-like › Dimerization domain in LRIM1/APL1C › Dimerization domain in LRIM1/APL1C | 0.75 | 70.0 | 5.03e-01 | 100.0% | 88.4% |
| 4587769 | 192.7.1.4 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Val_tRNA-synt_C | 0.74 | 69.0 | 6.76e-01 | 100.0% | 95.4% |
| 5064397 | 5086.1.1.231 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › Rad50_zn_hook | 0.74 | 69.0 | 4.67e-01 | 100.0% | 46.7% |
| 3630583 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.74 | 69.0 | 5.53e-01 | 100.0% | 63.6% |
| 4185385 | 605.2.1.6 ↗ | alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 › Val_tRNA-synt_C | 0.74 | 68.0 | 6.46e-01 | 100.0% | 90.0% |
| 3461533 | 3755.3.1.610 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › UPF0114 | 0.73 | 65.0 | 5.07e-01 | 100.0% | 47.2% |
| 4669204 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 67.0 | 3.97e-01 | 100.0% | 14.8% |
| 3663497 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.73 | 67.0 | 4.87e-01 | 100.0% | 63.2% |
| 3354816 | 4992.1.1.0 ↗ | extended segments › RelB-like › RelB-like › RelB-like | 0.73 | 68.0 | 6.66e-01 | 100.0% | 96.9% |
| 3249236 | 4207.1.2.93 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › RNA12 | 0.73 | 68.0 | 4.48e-01 | 100.0% | 37.6% |
| 3909017 | 192.5.1.1 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 | 0.73 | 67.0 | 5.79e-01 | 100.0% | 70.0% |
| 5064040 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.73 | 68.0 | 4.54e-01 | 100.0% | 30.7% |
| 5081618 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.72 | 67.0 | 5.25e-01 | 100.0% | 52.5% |
| 4016292 | 192.2.1.18 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ING | 0.72 | 67.0 | 5.03e-01 | 100.0% | 46.7% |
| 3167160 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 66.0 | 3.78e-01 | 100.0% | 11.5% |
| 3813837 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.72 | 58.0 | 5.43e-01 | 100.0% | 72.0% |
| 3741614 | 101.1.2.236 ↗ | alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD | 0.72 | 66.0 | 4.71e-01 | 100.0% | 46.7% |
| 4499889 | 192.24.1.1 ↗ | alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain › RPC3_helical | 0.72 | 65.0 | 5.63e-01 | 100.0% | 67.7% |
| 3853927 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.72 | 66.0 | 4.18e-01 | 100.0% | 49.6% |
| 4045132 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.71 | 66.0 | 5.31e-01 | 100.0% | 93.6% |
| 3724779 | 101.1.2.236 ↗ | alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD | 0.71 | 65.0 | 4.62e-01 | 100.0% | 37.1% |
| 5082442 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.71 | 66.0 | 5.03e-01 | 100.0% | 48.5% |
| 4028746 | 10.28.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in Zinc finger protein ZPR1 › Jelly-roll domain in Zinc finger protein ZPR1 › jr-ZPR1 | 0.71 | 63.0 | 4.63e-01 | 100.0% | 58.1% |
| 4443506 | 101.1.2.517 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD | 0.70 | 64.0 | 3.81e-01 | 100.0% | 15.6% |
| 3493417 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.70 | 64.0 | 4.61e-01 | 100.0% | 40.6% |
| 3194355 | 101.1.2.517 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD | 0.70 | 64.0 | 3.65e-01 | 100.0% | 11.5% |
| 4022243 | 101.1.2.517 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD | 0.70 | 63.0 | 3.64e-01 | 100.0% | 12.5% |
| 4196235 | 159.1.1.1 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › MazG | 0.69 | 62.0 | 5.24e-01 | 100.0% | 61.0% |
| 3497542 | 626.1.1.1 ↗ | alpha complex topology › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › FH2 | 0.69 | 59.0 | 3.63e-01 | 100.0% | 15.9% |
| 3421462 | 3922.1.1.187 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › UPF0114 | 0.69 | 58.0 | 5.08e-01 | 100.0% | 62.1% |
| 3660496 | 604.3.1.19 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › DUF3475 | 0.67 | 59.0 | 4.00e-01 | 100.0% | 28.0% |
| 4227260 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.67 | 61.0 | 4.76e-01 | 100.0% | 50.4% |
| 3740499 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.67 | 59.0 | 3.98e-01 | 100.0% | 28.0% |
| 3944731 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.66 | 58.0 | 4.25e-01 | 100.0% | 37.0% |
| 3973000 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.65 | 53.0 | 3.74e-01 | 90.2% | 35.8% |
| 4358884 | 7022.1.1.1 ↗ | alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT | 0.64 | 56.0 | 3.84e-01 | 100.0% | 27.7% |
| 4456370 | 5086.1.1.99 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ApoL | 0.64 | 57.0 | 5.04e-01 | 100.0% | 78.9% |
| 3717701 | 148.1.3.13 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_9 | 0.63 | 55.0 | 3.49e-01 | 100.0% | 20.0% |
| 3690944 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.62 | 52.0 | 3.91e-01 | 100.0% | 37.4% |
| 4549103 | 3755.4.1.54 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › PF30340 | 0.62 | 53.0 | 3.29e-01 | 100.0% | 20.3% |
| 3614055 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.62 | 54.0 | 3.78e-01 | 100.0% | 46.2% |
| 4011414 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.62 | 55.0 | 3.74e-01 | 100.0% | 28.8% |
| 4960489 | 3602.1.1.0 ↗ | alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain | 0.61 | 53.0 | 5.09e-01 | 100.0% | 88.6% |
| 3962942 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.60 | 52.0 | 3.95e-01 | 100.0% | 42.0% |
| 4042824 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.60 | 50.0 | 4.71e-01 | 100.0% | 78.8% |
| 3724671 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.59 | 50.0 | 2.95e-01 | 98.4% | 12.2% |
| 3276403 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.57 | 50.0 | 3.35e-01 | 100.0% | 24.3% |
| 4965179 | 5040.1.1.0 ↗ | extended segments › Cytochrome c oxidase subunit II-like, transmembrane region › Cytochrome c oxidase subunit II-like, transmembrane region › Cytochrome c oxidase subunit II-like, transmembrane region | 0.56 | 47.0 | 4.49e-01 | 100.0% | 96.0% |