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SR-VP_4-6_scaffold_141_4086954_prodigal-single.1__X__X__00405
Bact-VirSR-VP_4-6_scaffold_141_4086954_prodigal-single.1__X__X__00405
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-116
Domain cluster:
rep: MG575420.1__QDU35650.1__X__00019__D2-94
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qmiA02 | 2.40.128.210 | Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain | 0.58 | 32.0 | 3.41e-01 | 73.9% | 61.0% |
| 3s4kA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.54 | 28.0 | 2.81e-01 | 87.8% | 46.0% |
| 4ybvA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 27.0 | 2.69e-01 | 87.0% | 46.3% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4135238 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.58 | 40.0 | 2.96e-01 | 100.0% | 27.6% |
| None | — | 0.57 | 39.0 | 3.58e-01 | 89.6% | 54.7% | |
| 3371113 | 9.23.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 | 0.54 | 35.0 | 3.01e-01 | 71.3% | 41.1% |
| 4969654 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.53 | 39.0 | 2.91e-01 | 100.0% | 31.2% |
| 4980468 | 2484.1.1.338 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › baeRF_family10 | 0.52 | 30.0 | 2.86e-01 | 87.8% | 50.8% |
| 3719783 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 30.0 | 3.34e-01 | 70.4% | 71.3% |