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SR-VP_4-6_scaffold_141_4086954_prodigal-single.1__X__X__00424
Bact-VirSR-VP_4-6_scaffold_141_4086954_prodigal-single.1__X__X__00424
Identity
- Kingdom:
- phage
Quality
71.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-70
Domain cluster:
representative
CATH (56)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dq2A03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 52.0 | 6.11e-01 | 83.8% | 100.0% |
| 2eayB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 51.0 | 5.76e-01 | 86.8% | 100.0% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 63.0 | 6.17e-01 | 95.6% | 94.5% |
| 4f7uG00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 62.0 | 6.22e-01 | 94.1% | 100.0% |
| 3pggA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 62.0 | 5.94e-01 | 95.6% | 93.6% |
| 5mkiH00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 59.0 | 5.88e-01 | 92.6% | 91.5% |
| 1m5q101 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 62.0 | 6.27e-01 | 97.1% | 97.1% |
| 4c92B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 61.0 | 5.26e-01 | 95.6% | 67.6% |
| 4c92C00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 60.0 | 5.72e-01 | 94.1% | 94.9% |
| 4c92F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 60.0 | 5.81e-01 | 97.1% | 96.1% |
| 1f39A00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.70 | 55.0 | 4.81e-01 | 97.1% | 57.4% |
| 4c92G00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 61.0 | 5.90e-01 | 97.1% | 96.0% |
| 4m7dA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 58.0 | 5.98e-01 | 94.1% | 100.0% |
| 1d3bB00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 60.0 | 5.73e-01 | 100.0% | 100.0% |
| 1khcA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 56.0 | 5.72e-01 | 94.1% | 95.4% |
| 2zkmX01 | 2.30.29.240 | Mainly Beta › Roll › PH-domain like › | 0.66 | 55.0 | 3.86e-01 | 89.7% | 51.5% |
| 4a4kA02 | 2.30.30.1160 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 59.0 | 4.71e-01 | 100.0% | 93.2% |
| 1fhoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.66 | 51.0 | 4.33e-01 | 86.8% | 68.9% |
| 4innA00 | 2.40.128.520 | Mainly Beta › Beta Barrel › Lipocalin › | 0.66 | 56.0 | 4.47e-01 | 98.5% | 89.0% |
| 6asoH00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 54.0 | 5.04e-01 | 89.7% | 73.5% |
| 3pfsB00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 58.0 | 4.65e-01 | 98.5% | 92.3% |
| 1vw4M01 | 2.30.30.790 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 56.0 | 4.58e-01 | 100.0% | 80.3% |
| 3pieB05 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 54.0 | 5.56e-01 | 92.6% | 100.0% |
| 2ldmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 45.0 | 4.95e-01 | 86.8% | 94.3% |
| 6c6sD02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 49.0 | 5.18e-01 | 91.2% | 95.0% |
| 2daqA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 57.0 | 4.83e-01 | 98.5% | 85.5% |
| 2gfuA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 55.0 | 4.42e-01 | 97.1% | 71.6% |
| 2x5cA01 | 3.30.70.3590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 54.0 | 4.92e-01 | 95.6% | 75.8% |
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 55.0 | 5.15e-01 | 100.0% | 77.9% |
| 1n27A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 56.0 | 5.03e-01 | 100.0% | 88.5% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 53.0 | 5.32e-01 | 95.6% | 91.3% |
| 2nr4A01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 49.0 | 3.99e-01 | 86.8% | 92.5% |
| 4n4iA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 51.0 | 4.68e-01 | 89.7% | 84.4% |
| 4ld6A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 56.0 | 4.66e-01 | 100.0% | 80.3% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 53.0 | 4.99e-01 | 95.6% | 79.5% |
| 2p1gA02 | 2.30.260.10 | Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain | 0.62 | 53.0 | 4.68e-01 | 97.1% | 75.0% |
| 2kdsA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 51.0 | 4.82e-01 | 97.1% | 91.9% |
| 3pmiA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 42.0 | 4.34e-01 | 80.9% | 76.9% |
| 2k2jA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 45.0 | 3.89e-01 | 85.3% | 76.9% |
| 3meuB02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 52.0 | 5.09e-01 | 100.0% | 97.3% |
| 1wgsA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 50.0 | 4.04e-01 | 95.6% | 54.9% |
| 2elbA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 46.0 | 4.07e-01 | 89.7% | 73.5% |
| 3h6qA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.57 | 46.0 | 3.60e-01 | 95.6% | 99.4% |
| 3gd0A02 | 3.30.920.50 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain | 0.56 | 45.0 | 3.96e-01 | 94.1% | 79.5% |
| 6c1zA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 46.0 | 3.72e-01 | 94.1% | 100.0% |
| 1o8vA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 44.0 | 3.68e-01 | 92.6% | 100.0% |
| 3gvzA00 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.55 | 43.0 | 2.94e-01 | 86.8% | 88.7% |
| 2greF02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.54 | 45.0 | 4.31e-01 | 94.1% | 79.5% |
| 2d4rA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 41.0 | 3.32e-01 | 86.8% | 82.2% |
| 4hwmA00 | 2.40.128.500 | Mainly Beta › Beta Barrel › Lipocalin › YedD-like protein | 0.54 | 46.0 | 3.94e-01 | 100.0% | 88.0% |
| 3wasA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 45.0 | 2.89e-01 | 100.0% | 53.0% |
| 2lp6A00 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.53 | 44.0 | 4.09e-01 | 97.1% | 72.5% |
| 1ci3M02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.51 | 34.0 | 3.58e-01 | 73.5% | 79.3% |
| 1dleA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 35.0 | 2.99e-01 | 75.0% | 73.6% |
| 3kl9A02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.51 | 41.0 | 4.03e-01 | 94.1% | 83.8% |
| 1ko2A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.50 | 36.0 | 2.65e-01 | 80.9% | 91.3% |
ECOD (83)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4953223 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.78 | 55.0 | 6.25e-01 | 86.8% | 100.0% |
| 4149821 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 60.0 | 6.39e-01 | 95.6% | 95.0% |
| 4058174 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.77 | 64.0 | 6.54e-01 | 100.0% | 93.8% |
| 4957377 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.77 | 56.0 | 5.78e-01 | 91.2% | 82.5% |
| 4332042 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 62.0 | 6.16e-01 | 98.5% | 84.3% |
| 5060199 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 65.0 | 5.57e-01 | 98.5% | 96.2% |
| 4974641 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.73 | 65.0 | 6.50e-01 | 98.5% | 100.0% |
| 409205 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.72 | 65.0 | 6.06e-01 | 100.0% | 85.9% |
| 5032402 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 62.0 | 5.78e-01 | 95.6% | 94.1% |
| 3502962 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.72 | 62.0 | 5.86e-01 | 94.1% | 93.8% |
| 4983255 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.72 | 62.0 | 6.04e-01 | 95.6% | 90.7% |
| 3518475 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 52.0 | 5.19e-01 | 92.6% | 74.3% |
| 4575051 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.71 | 63.0 | 5.97e-01 | 97.1% | 86.3% |
| 3304627 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.71 | 54.0 | 5.95e-01 | 92.6% | 100.0% |
| 4987003 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.71 | 61.0 | 6.23e-01 | 94.1% | 100.0% |
| 5052084 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.71 | 61.0 | 6.24e-01 | 94.1% | 98.5% |
| 5077846 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.71 | 61.0 | 5.91e-01 | 94.1% | 89.3% |
| 4220126 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.71 | 64.0 | 5.95e-01 | 100.0% | 83.5% |
| 3397846 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 52.0 | 5.69e-01 | 94.1% | 96.4% |
| 3517377 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.71 | 57.0 | 5.27e-01 | 97.1% | 69.4% |
| 3401273 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.70 | 63.0 | 5.66e-01 | 100.0% | 82.1% |
| 3398219 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.70 | 61.0 | 5.48e-01 | 97.1% | 84.2% |
| 3586953 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 60.0 | 6.14e-01 | 94.1% | 100.0% |
| 3244451 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.70 | 60.0 | 5.49e-01 | 95.6% | 75.6% |
| 4990442 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.70 | 61.0 | 5.83e-01 | 97.1% | 88.7% |
| 4030048 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.70 | 63.0 | 5.41e-01 | 100.0% | 75.2% |
| 3710540 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.70 | 60.0 | 5.80e-01 | 94.1% | 98.7% |
| 3812580 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.70 | 62.0 | 5.07e-01 | 98.5% | 60.2% |
| 3164898 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.70 | 53.0 | 4.76e-01 | 95.6% | 58.9% |
| 3703320 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.70 | 60.0 | 5.71e-01 | 95.6% | 98.7% |
| 3555586 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.69 | 60.0 | 5.43e-01 | 97.1% | 87.4% |
| 4932541 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.69 | 60.0 | 5.88e-01 | 95.6% | 93.2% |
| 3621457 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.69 | 59.0 | 5.93e-01 | 95.6% | 98.6% |
| 4019995 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.69 | 60.0 | 5.13e-01 | 97.1% | 84.5% |
| 1549365 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.69 | 61.0 | 5.75e-01 | 100.0% | 95.2% |
| 3924975 | 4.1.1.377 ↗ | beta barrels › SH3 › SH3 › SH3 › MSL3_chromo-like | 0.69 | 57.0 | 5.46e-01 | 92.6% | 82.5% |
| 3925748 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.68 | 58.0 | 5.64e-01 | 94.1% | 100.0% |
| 3167103 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.68 | 59.0 | 5.21e-01 | 97.1% | 81.0% |
| 2325340 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.68 | 60.0 | 5.34e-01 | 100.0% | 68.0% |
| 1088864 | 9.1.1.15 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF2147 | 0.68 | 56.0 | 4.45e-01 | 94.1% | 89.8% |
| 3177842 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.68 | 60.0 | 4.91e-01 | 97.1% | 70.0% |
| 3629480 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.68 | 59.0 | 5.38e-01 | 97.1% | 86.7% |
| 4340758 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 57.0 | 5.73e-01 | 92.6% | 98.6% |
| 3926207 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 49.0 | 5.45e-01 | 83.8% | 100.0% |
| 3176686 | 4.1.1.81 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM14 | 0.67 | 59.0 | 5.49e-01 | 98.5% | 97.6% |
| 3971321 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.67 | 56.0 | 5.67e-01 | 97.1% | 92.8% |
| 3167351 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.67 | 57.0 | 5.27e-01 | 95.6% | 78.4% |
| 3936053 | 4.1.1.71 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin7 | 0.67 | 56.0 | 5.61e-01 | 94.1% | 92.9% |
| 4007999 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.66 | 54.0 | 4.28e-01 | 92.6% | 44.4% |
| 3913687 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.66 | 54.0 | 4.95e-01 | 98.5% | 67.8% |
| 3507338 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 51.0 | 5.35e-01 | 95.6% | 93.3% |
| 3482202 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.66 | 49.0 | 5.34e-01 | 97.1% | 98.2% |
| 3965254 | 4.1.1.222 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF6948 | 0.65 | 55.0 | 4.98e-01 | 94.1% | 91.6% |
| 3932851 | 220.1.1.46 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_14 | 0.65 | 52.0 | 4.30e-01 | 86.8% | 79.2% |
| 3964422 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.65 | 51.0 | 4.00e-01 | 97.1% | 38.1% |
| 3530591 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.65 | 58.0 | 4.75e-01 | 100.0% | 76.8% |
| 4882265 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.65 | 58.0 | 4.50e-01 | 100.0% | 77.7% |
| 3243143 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 55.0 | 5.67e-01 | 95.6% | 98.5% |
| 3911348 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 58.0 | 4.63e-01 | 100.0% | 68.5% |
| 3466685 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.64 | 57.0 | 4.14e-01 | 100.0% | 54.1% |
| 3858885 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 47.0 | 5.15e-01 | 85.3% | 100.0% |
| 4497776 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.63 | 50.0 | 4.80e-01 | 94.1% | 73.8% |
| 3714657 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 51.0 | 3.89e-01 | 89.7% | 61.9% |
| 4018795 | 220.1.1.43 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SIN1_PH | 0.62 | 48.0 | 3.97e-01 | 85.3% | 66.9% |
| 3712219 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.61 | 50.0 | 5.16e-01 | 98.5% | 95.4% |
| 3484606 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.61 | 53.0 | 4.91e-01 | 95.6% | 81.2% |
| 3936926 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 51.0 | 5.26e-01 | 98.5% | 95.4% |
| 3927213 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.60 | 52.0 | 5.24e-01 | 97.1% | 95.7% |
| 3607724 | 220.1.1.92 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Mcp5_PH | 0.60 | 49.0 | 3.97e-01 | 89.7% | 76.2% |
| 4332616 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.60 | 50.0 | 3.84e-01 | 97.1% | 100.0% |
| 4422834 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.60 | 45.0 | 4.37e-01 | 94.1% | 74.7% |
| 1316604 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.58 | 45.0 | 3.38e-01 | 85.3% | 43.7% |
| 3947700 | 4.8.1.25 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DSRB | 0.57 | 44.0 | 4.54e-01 | 86.8% | 100.0% |
| 4080655 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.57 | 47.0 | 4.25e-01 | 95.6% | 66.3% |
| 5042874 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 40.0 | 3.44e-01 | 76.5% | 100.0% |
| 5029609 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.56 | 38.0 | 2.37e-01 | 72.1% | 19.5% |
| 4227875 | 9.4.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains › PF26335 | 0.56 | 46.0 | 3.70e-01 | 95.6% | 97.9% |
| 3428887 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.55 | 45.0 | 4.08e-01 | 94.1% | 67.0% |
| 4182769 | 375.13.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Toprim_C_rpt | 0.53 | 39.0 | 4.16e-01 | 85.3% | 90.0% |
| 3597282 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.52 | 40.0 | 3.92e-01 | 97.1% | 75.0% |
| 3451965 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.52 | 43.0 | 4.14e-01 | 94.1% | 81.2% |
| 3505004 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.52 | 37.0 | 3.48e-01 | 77.9% | 90.0% |
| 4623774 | 10.1.1.26 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C | 0.51 | 42.0 | 3.48e-01 | 100.0% | 85.7% |
D2
high
residues 72-119
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qbyA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 50.0 | 3.49e-01 | 97.9% | 23.1% |
| 1a62A01 | 1.10.720.10 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.68 | 48.0 | 4.94e-01 | 93.8% | 80.4% |
| 2bg1A01 | 3.90.1310.40 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › | 0.63 | 48.0 | 4.21e-01 | 85.4% | 55.8% |
| 7s0rB01 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.62 | 52.0 | 4.56e-01 | 97.9% | 92.1% |
| 4arvA02 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.61 | 49.0 | 3.81e-01 | 100.0% | 69.0% |
| 1tdzA02 | 1.10.8.50 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.60 | 50.0 | 3.76e-01 | 100.0% | 59.0% |
| 1lp1A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.60 | 48.0 | 4.72e-01 | 100.0% | 94.5% |
| 2nn4A00 | 1.10.287.760 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like | 0.58 | 45.0 | 4.15e-01 | 95.8% | 62.9% |
| 1cbyA00 | 3.40.198.10 | Alpha Beta › 3-Layer(aba) Sandwich › Delta-endotoxin CytB › Delta-endotoxin CytB-like | 0.58 | 45.0 | 2.93e-01 | 85.4% | 37.9% |
| 4az3A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 49.0 | 3.10e-01 | 100.0% | 31.3% |
| 4bzaA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.56 | 43.0 | 4.01e-01 | 93.8% | 70.6% |
| 1sw2A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.55 | 43.0 | 3.04e-01 | 89.6% | 89.2% |
| 3ig5A04 | 1.10.8.960 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.53 | 42.0 | 3.82e-01 | 89.6% | 68.2% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3268404 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.69 | 51.0 | 4.86e-01 | 95.8% | 68.3% |
| 3177538 | 105.1.1.47 ↗ | alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain › bHLH_INO4 | 0.65 | 50.0 | 4.37e-01 | 100.0% | 54.7% |
| 4398329 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.62 | 47.0 | 3.42e-01 | 85.4% | 28.0% |
| 3308343 | 1008.1.1.27 ↗ | alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › COPIIcoated_ERV | 0.56 | 41.0 | 3.63e-01 | 81.2% | 53.3% |
| 3838702 | 107.1.1.1 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrom_C | 0.54 | 41.0 | 3.28e-01 | 83.3% | 41.8% |