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SR-VP_4-6_scaffold_141_4086954_prodigal-single.1__X__X__00427
Bact-VirSR-VP_4-6_scaffold_141_4086954_prodigal-single.1__X__X__00427
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 37-171
Domain cluster:
rep: DGJ7_scaffold_2_2069_prodigal-single.1__X__X__00160__D59-179
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d30A01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.78 | 58.0 | 6.50e-01 | 100.0% | 96.3% |
| 4avrA00 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.78 | 53.0 | 6.28e-01 | 98.5% | 100.0% |
| 3czbA01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.77 | 57.0 | 5.20e-01 | 100.0% | 60.0% |
| 4jcwA01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.75 | 55.0 | 6.24e-01 | 98.5% | 99.0% |
| 2ae0X01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.68 | 55.0 | 4.93e-01 | 100.0% | 63.3% |
| 1zc1A01 | 2.40.40.50 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › Ubiquitin fusion degradation protein UFD1, N-terminal domain | 0.67 | 49.0 | 5.43e-01 | 100.0% | 98.1% |
| 7nz1G01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.67 | 46.0 | 5.40e-01 | 94.1% | 100.0% |
| 2ki8A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.63 | 49.0 | 5.16e-01 | 97.8% | 88.0% |
| 2napA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.62 | 50.0 | 5.48e-01 | 95.6% | 100.0% |
| 1g8kA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.62 | 50.0 | 5.09e-01 | 96.3% | 84.4% |
| 8e9gG01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.60 | 42.0 | 4.87e-01 | 94.1% | 100.0% |
| 1q16A13 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.58 | 50.0 | 4.82e-01 | 100.0% | 81.3% |
| 1y5lA02 | 3.40.50.12440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 52.0 | 3.00e-01 | 100.0% | 12.5% |
| 2e7zA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.55 | 49.0 | 4.67e-01 | 97.0% | 83.9% |
| 1krhA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 38.0 | 4.34e-01 | 100.0% | 100.0% |
| 1ti2A04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.54 | 49.0 | 4.68e-01 | 97.0% | 90.3% |
| 2vpzA05 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.54 | 48.0 | 4.52e-01 | 97.0% | 81.1% |
| 1dmrA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.53 | 48.0 | 4.47e-01 | 96.3% | 80.4% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4623574 | 1.1.2.13 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › 3D | 0.82 | 57.0 | 6.55e-01 | 99.3% | 96.0% |
| 5083293 | 1.1.2.13 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › 3D | 0.82 | 57.0 | 6.40e-01 | 100.0% | 91.4% |
| 4963913 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.81 | 47.0 | 6.01e-01 | 97.0% | 97.5% |
| 4419943 | 1.1.2.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 | 0.79 | 55.0 | 6.32e-01 | 99.3% | 96.0% |
| 4299713 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.79 | 59.0 | 6.62e-01 | 100.0% | 99.0% |
| 3277741 | 1.1.2.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 | 0.78 | 57.0 | 6.16e-01 | 100.0% | 87.8% |
| 5069203 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.78 | 49.0 | 5.98e-01 | 98.5% | 95.6% |
| 349867 | 1.1.2.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 | 0.78 | 58.0 | 6.40e-01 | 100.0% | 92.9% |
| 3974469 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.78 | 53.0 | 6.25e-01 | 97.8% | 98.9% |
| 3274054 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.77 | 59.0 | 6.27e-01 | 100.0% | 89.2% |
| 3720989 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.77 | 58.0 | 6.43e-01 | 97.8% | 95.5% |
| 4263053 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.77 | 48.0 | 5.91e-01 | 97.0% | 98.8% |
| 4488210 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.77 | 47.0 | 5.86e-01 | 97.0% | 97.6% |
| 4205030 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.76 | 47.0 | 5.89e-01 | 97.0% | 98.8% |
| 3726745 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.76 | 57.0 | 6.45e-01 | 98.5% | 100.0% |
| 5028227 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.76 | 48.0 | 5.90e-01 | 96.3% | 100.0% |
| 3010131 | 1.1.2.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 | 0.76 | 55.0 | 6.17e-01 | 99.3% | 94.4% |
| 3557903 | 1.1.2.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N | 0.75 | 50.0 | 5.82e-01 | 99.3% | 94.7% |
| 4639326 | 1.1.2.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox | 0.75 | 48.0 | 5.26e-01 | 100.0% | 78.2% |
| 4040376 | 1.1.2.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox | 0.75 | 48.0 | 4.91e-01 | 100.0% | 66.2% |
| 4370157 | 1.1.2.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 | 0.75 | 55.0 | 5.40e-01 | 99.3% | 70.6% |
| 4485138 | 1.1.2.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox | 0.75 | 48.0 | 4.98e-01 | 100.0% | 68.8% |
| 3264281 | 1.1.2.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PF29515 | 0.75 | 60.0 | 6.11e-01 | 100.0% | 85.4% |
| 4145927 | 1.1.2.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox | 0.75 | 48.0 | 4.80e-01 | 100.0% | 63.7% |
| 4200720 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.75 | 46.0 | 5.75e-01 | 97.0% | 98.8% |
| 3477728 | 1.1.2.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N | 0.75 | 50.0 | 5.81e-01 | 99.3% | 95.8% |
| 1567466 | 1.1.2.13 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › 3D | 0.74 | 53.0 | 5.18e-01 | 91.1% | 67.8% |
| 5060218 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.74 | 47.0 | 5.72e-01 | 96.3% | 100.0% |
| 3412967 | 1.1.2.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N | 0.74 | 48.0 | 5.80e-01 | 98.5% | 98.9% |
| 5060748 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.74 | 48.0 | 5.27e-01 | 99.3% | 80.0% |
| 3187650 | 1.1.2.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 | 0.73 | 59.0 | 6.34e-01 | 99.3% | 97.4% |
| 3265817 | 1.1.2.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PF29515 | 0.73 | 58.0 | 6.23e-01 | 100.0% | 95.7% |
| 3976753 | 1.1.2.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 | 0.73 | 55.0 | 5.31e-01 | 100.0% | 70.0% |
| 3165363 | 1.1.2.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 | 0.72 | 55.0 | 5.08e-01 | 99.3% | 64.2% |
| 3783660 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.72 | 48.0 | 5.50e-01 | 97.8% | 91.0% |
| 4115281 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.72 | 60.0 | 6.38e-01 | 100.0% | 99.2% |
| 4890564 | 101.1.2.869 ↗ | alpha arrays › HTH › HTH › winged helix domain › IML1_N | 0.71 | 43.0 | 5.32e-01 | 97.8% | 100.0% |
| 3193685 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.70 | 49.0 | 5.68e-01 | 98.5% | 100.0% |
| 4540120 | 1.1.2.13 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › 3D | 0.70 | 54.0 | 4.76e-01 | 100.0% | 56.8% |
| 4200338 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.69 | 50.0 | 5.55e-01 | 97.8% | 94.3% |
| 4048983 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.69 | 50.0 | 5.66e-01 | 99.3% | 96.2% |
| 4936180 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.69 | 52.0 | 5.55e-01 | 97.8% | 89.0% |
| 5049516 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.68 | 52.0 | 5.35e-01 | 97.0% | 83.1% |
| 3789369 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.68 | 48.0 | 5.50e-01 | 100.0% | 99.0% |
| 4954217 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.67 | 53.0 | 5.17e-01 | 98.5% | 74.7% |
| 2776332 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.67 | 52.0 | 5.34e-01 | 96.3% | 84.0% |
| 3926811 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.66 | 47.0 | 5.38e-01 | 96.3% | 99.0% |
| 4362257 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.65 | 48.0 | 5.43e-01 | 96.3% | 100.0% |
| 4948295 | 1.1.2.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › MacB_PCD | 0.64 | 50.0 | 4.39e-01 | 92.6% | 57.4% |
| 4412522 | 1.1.2.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Barwin | 0.63 | 55.0 | 5.30e-01 | 100.0% | 83.8% |
| 4140247 | 1.1.2.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Glyco_hydro_45 | 0.62 | 57.0 | 4.68e-01 | 97.0% | 86.5% |
| 3688059 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.59 | 53.0 | 4.95e-01 | 100.0% | 79.4% |
| 4174466 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.58 | 51.0 | 4.50e-01 | 94.8% | 70.0% |
| 4453032 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.57 | 40.0 | 4.46e-01 | 100.0% | 95.0% |
| 3332068 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.56 | 51.0 | 4.84e-01 | 96.3% | 100.0% |
| 4985608 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.56 | 51.0 | 4.80e-01 | 97.0% | 82.5% |
| 2968637 | 1.1.2.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 | 0.56 | 50.0 | 4.66e-01 | 97.0% | 82.6% |
| 3716983 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.55 | 26.0 | 3.24e-01 | 97.8% | 71.2% |
| 4003765 | 221.1.1.49 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD_2 | 0.53 | 32.0 | 3.21e-01 | 99.3% | 56.3% |
| 3337850 | 221.1.1.165 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DUF7054 | 0.53 | 31.0 | 3.64e-01 | 98.5% | 88.2% |
| 4030374 | 2004.1.1.36 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynamin_N | 0.50 | 42.0 | 2.99e-01 | 91.9% | 54.5% |
D2
high
residues 176-244