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SR-VP_4-6_scaffold_141_4176636_prodigal-single.1__X__X__00155
Bact-VirSR-VP_4-6_scaffold_141_4176636_prodigal-single.1__X__X__00155
Identity
- Kingdom:
- phage
Quality
89.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-128
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4f7uG00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 42.0 | 5.67e-01 | 72.0% | 100.0% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 41.0 | 5.34e-01 | 80.0% | 100.0% |
| 4c92G00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 42.0 | 5.39e-01 | 80.8% | 100.0% |
| 3jb9H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 42.0 | 5.35e-01 | 78.4% | 100.0% |
| 1d3bC00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 39.0 | 5.17e-01 | 74.4% | 100.0% |
| 3jb9F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 40.0 | 4.87e-01 | 72.0% | 89.0% |
| 6v4xC01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 41.0 | 4.56e-01 | 71.2% | 78.0% |
| 1xqbA01 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.57 | 37.0 | 3.94e-01 | 71.2% | 75.2% |
| 1e5pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 41.0 | 3.91e-01 | 76.0% | 86.6% |
| 3nmzD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 34.0 | 3.94e-01 | 70.4% | 89.3% |
| 2dl5A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 31.0 | 3.80e-01 | 80.8% | 91.0% |
| 2epdA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 29.0 | 3.57e-01 | 76.8% | 86.8% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3907190 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.78 | 45.0 | 5.11e-01 | 80.0% | 74.7% |
| 4283343 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.74 | 47.0 | 5.79e-01 | 80.8% | 100.0% |
| 3506156 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.69 | 40.0 | 5.18e-01 | 76.8% | 97.3% |
| 3715818 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.69 | 40.0 | 4.54e-01 | 74.4% | 74.7% |
| 4876565 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.67 | 41.0 | 4.77e-01 | 72.0% | 84.4% |
| 3592930 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 40.0 | 4.60e-01 | 70.4% | 78.9% |
| 4387099 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.67 | 42.0 | 5.24e-01 | 79.2% | 100.0% |
| 4029204 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.67 | 40.0 | 4.82e-01 | 70.4% | 88.2% |
| 2391272 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.66 | 39.0 | 4.54e-01 | 70.4% | 79.6% |
| 3598657 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 41.0 | 4.53e-01 | 73.6% | 78.0% |
| 3396989 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.64 | 42.0 | 4.66e-01 | 73.6% | 82.0% |
| 4517901 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 43.0 | 4.90e-01 | 79.2% | 91.6% |
| 3927391 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.62 | 44.0 | 4.83e-01 | 84.0% | 88.3% |
| 3450257 | 4.1.1.150 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3123 | 0.60 | 35.0 | 3.88e-01 | 72.8% | 73.7% |
| 3180573 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 38.0 | 4.35e-01 | 77.6% | 85.3% |
| 3402950 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.59 | 41.0 | 2.83e-01 | 80.0% | 19.8% |
| 3898952 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.58 | 34.0 | 4.24e-01 | 92.8% | 96.0% |
| 5035282 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.56 | 39.0 | 3.90e-01 | 70.4% | 77.6% |
| 3459723 | 4.1.1.173 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4216 | 0.54 | 42.0 | 3.77e-01 | 80.8% | 97.6% |
| 3622911 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.54 | 31.0 | 3.85e-01 | 72.0% | 98.6% |
| 3915732 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.53 | 32.0 | 3.76e-01 | 80.8% | 88.2% |
| 3707345 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 36.0 | 4.19e-01 | 80.8% | 100.0% |
| 3459099 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.52 | 41.0 | 4.44e-01 | 83.2% | 100.0% |
| 3781750 | 9.2.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › FBO_C | 0.52 | 38.0 | 3.21e-01 | 75.2% | 82.4% |
| 3700484 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.51 | 41.0 | 3.28e-01 | 88.0% | 49.2% |
| 3990703 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.50 | 37.0 | 3.42e-01 | 76.8% | 82.4% |